RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
SGCE-201ENST00000265735 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
SGCE-201ENST00000265735 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
SGCE-201ENST00000265735 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
SGCE-201ENST00000265735 CCDC179H3BU77 68 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 UQCRQO14949 82 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 COX7CP15954 63 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 SERP2Q8N6R1 65 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 Q8N9L7 120 aa7.4□□□□□ -1.23
SGCE-201ENST00000265735 MOBPQ13875 183 aa7.39□□□□□ -1.23
SGCE-201ENST00000265735 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
SGCE-201ENST00000265735 DSCR10P59022 87 aa7.38□□□□□ -1.23
SGCE-201ENST00000265735 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
SGCE-201ENST00000265735 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
SGCE-201ENST00000265735 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
SGCE-201ENST00000265735 SS18L2Q9UHA2 77 aa7.35□□□□□ -1.23
SGCE-201ENST00000265735 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.23
SGCE-201ENST00000265735 K7EQZ3 153 aa7.34□□□□□ -1.23
SGCE-201ENST00000265735 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.23
SGCE-201ENST00000265735 J3KT08 172 aa7.33□□□□□ -1.24
SGCE-201ENST00000265735 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
SGCE-201ENST00000265735 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
SGCE-201ENST00000265735 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
SGCE-201ENST00000265735 CD164Q04900 197 aa7.31□□□□□ -1.24
SGCE-201ENST00000265735 A8MWP4 228 aa7.29□□□□□ -1.24
SGCE-201ENST00000265735 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
SGCE-201ENST00000265735 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
SGCE-201ENST00000265735 LRP2P98164 4655 aa7.27□□□□□ -1.25
SGCE-201ENST00000265735 NDUFB1O75438 58 aa7.27□□□□□ -1.25
SGCE-201ENST00000265735 PRR15Q8IV56 129 aa7.27□□□□□ -1.25
SGCE-201ENST00000265735 Q96NJ1 140 aa7.26□□□□□ -1.25
SGCE-201ENST00000265735 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
SGCE-201ENST00000265735 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
SGCE-201ENST00000265735 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
SGCE-201ENST00000265735 C20orf197Q8N268 126 aa7.22□□□□□ -1.25
SGCE-201ENST00000265735 LPAP08519 4548 aa7.22□□□□□ -1.25
SGCE-201ENST00000265735 PRR4Q16378 134 aa7.22□□□□□ -1.25
SGCE-201ENST00000265735 WFDC13Q8IUB5 93 aa7.22□□□□□ -1.25
SGCE-201ENST00000265735 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
SGCE-201ENST00000265735 CASC2Q6XLA1 102 aa7.21□□□□□ -1.26
SGCE-201ENST00000265735 SPINK1P00995 79 aa7.19□□□□□ -1.26
SGCE-201ENST00000265735 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
SGCE-201ENST00000265735 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
SGCE-201ENST00000265735 Q5XG85 94 aa7.18□□□□□ -1.26
SGCE-201ENST00000265735 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
SGCE-201ENST00000265735 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
SGCE-201ENST00000265735 RETNLBQ9BQ08 111 aa7.17□□□□□ -1.26
SGCE-201ENST00000265735 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
SGCE-201ENST00000265735 LIMD2Q9BT23 127 aa7.16□□□□□ -1.26
SGCE-201ENST00000265735 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
SGCE-201ENST00000265735 TMEM258P61165 79 aa7.16□□□□□ -1.26
SGCE-201ENST00000265735 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
SGCE-201ENST00000265735 IGHV6-1A0A0B4J1U7 121 aa7.15□□□□□ -1.27
SGCE-201ENST00000265735 hDV103S1A0JD37 113 aa7.15□□□□□ -1.27
SGCE-201ENST00000265735 NDUFC1O43677 76 aa7.14□□□□□ -1.27
SGCE-201ENST00000265735 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
SGCE-201ENST00000265735 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SGCE-201ENST00000265735 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
SGCE-201ENST00000265735 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
SGCE-201ENST00000265735 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
SGCE-201ENST00000265735 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
SGCE-201ENST00000265735 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
SGCE-201ENST00000265735 C8orf87E5RJ46 101 aa7.09□□□□□ -1.27
SGCE-201ENST00000265735 H7BZZ5 65 aa7.09□□□□□ -1.27
SGCE-201ENST00000265735 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
SGCE-201ENST00000265735 MP68P56378 58 aa7.09□□□□□ -1.27
SGCE-201ENST00000265735 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
SGCE-201ENST00000265735 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
SGCE-201ENST00000265735 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
SGCE-201ENST00000265735 H3BPC8 53 aa7.06□□□□□ -1.28
SGCE-201ENST00000265735 KRTAP4-2Q9BYR5 136 aa7.06□□□□□ -1.28
SGCE-201ENST00000265735 H0Y9P7 68 aa7.05□□□□□ -1.28
SGCE-201ENST00000265735 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
SGCE-201ENST00000265735 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
SGCE-201ENST00000265735 NDUFS5O43920 106 aa7.04□□□□□ -1.28
SGCE-201ENST00000265735 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
SGCE-201ENST00000265735 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
SGCE-201ENST00000265735 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
SGCE-201ENST00000265735 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
SGCE-201ENST00000265735 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
SGCE-201ENST00000265735 LINC00313P59037 77 aa7.03□□□□□ -1.28
SGCE-201ENST00000265735 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
SGCE-201ENST00000265735 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
SGCE-201ENST00000265735 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
SGCE-201ENST00000265735 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
SGCE-201ENST00000265735 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SGCE-201ENST00000265735 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
SGCE-201ENST00000265735 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
SGCE-201ENST00000265735 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
SGCE-201ENST00000265735 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
SGCE-201ENST00000265735 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
SGCE-201ENST00000265735 MUC2Q02817 5179 aa6.92□□□□□ -1.3
SGCE-201ENST00000265735 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.31
SGCE-201ENST00000265735 LOC101927531A0A1B0GV80 90 aa6.89□□□□□ -1.31
SGCE-201ENST00000265735 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
SGCE-201ENST00000265735 Q5W150 140 aa6.88□□□□□ -1.31
SGCE-201ENST00000265735 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
SGCE-201ENST00000265735 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
SGCE-201ENST00000265735 C9orf92A6NGG3 77 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms