RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 JMJD7-PLA2G4BH0Y9G9 81 aa4.47□□□□□ -1.69
ERCC8-201ENST00000265038 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
ERCC8-201ENST00000265038 Q75L30 129 aa4.47□□□□□ -1.69
ERCC8-201ENST00000265038 Q6ZQT0 140 aa4.46□□□□□ -1.69
ERCC8-201ENST00000265038 SIGMAR1Q99720 223 aa4.46□□□□□ -1.69
ERCC8-201ENST00000265038 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
ERCC8-201ENST00000265038 DSCR10P59022 87 aa4.46□□□□□ -1.7
ERCC8-201ENST00000265038 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
ERCC8-201ENST00000265038 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
ERCC8-201ENST00000265038 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
ERCC8-201ENST00000265038 C14orf132Q9NPU4 83 aa4.45□□□□□ -1.7
ERCC8-201ENST00000265038 A8MUU9 505 aa4.44□□□□□ -1.7
ERCC8-201ENST00000265038 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
ERCC8-201ENST00000265038 PDE6GP18545 87 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 LINC00313P59037 77 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 H3BT86 120 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
ERCC8-201ENST00000265038 COL5A1-AS1Q5SY13 56 aa4.42□□□□□ -1.7
ERCC8-201ENST00000265038 A0A1B0GW54 56 aa4.41□□□□□ -1.7
ERCC8-201ENST00000265038 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
ERCC8-201ENST00000265038 IGHV6-1A0A0B4J1U7 121 aa4.41□□□□□ -1.7
ERCC8-201ENST00000265038 A0A1B0GVX0 72 aa4.4□□□□□ -1.7
ERCC8-201ENST00000265038 J3KT08 172 aa4.39□□□□□ -1.71
ERCC8-201ENST00000265038 PCP4L1A6NKN8 68 aa4.38□□□□□ -1.71
ERCC8-201ENST00000265038 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
ERCC8-201ENST00000265038 MT1HP80294 61 aa4.37□□□□□ -1.71
ERCC8-201ENST00000265038 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
ERCC8-201ENST00000265038 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
ERCC8-201ENST00000265038 PRO0461Q9UI25 63 aa4.37□□□□□ -1.71
ERCC8-201ENST00000265038 K7EP34 96 aa4.36□□□□□ -1.71
ERCC8-201ENST00000265038 NREPQ16612 68 aa4.36□□□□□ -1.71
ERCC8-201ENST00000265038 A8MWP4 228 aa4.36□□□□□ -1.71
ERCC8-201ENST00000265038 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
ERCC8-201ENST00000265038 NDUFB1O75438 58 aa4.35□□□□□ -1.71
ERCC8-201ENST00000265038 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
ERCC8-201ENST00000265038 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
ERCC8-201ENST00000265038 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
ERCC8-201ENST00000265038 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
ERCC8-201ENST00000265038 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
ERCC8-201ENST00000265038 K7EQZ3 153 aa4.3□□□□□ -1.72
ERCC8-201ENST00000265038 Q6ZVQ6 151 aa4.3□□□□□ -1.72
ERCC8-201ENST00000265038 ZCCHC13Q8WW36 166 aaKnown RBP4.29□□□□□ -1.72
ERCC8-201ENST00000265038 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
ERCC8-201ENST00000265038 BPY2O14599 106 aa4.29□□□□□ -1.72
ERCC8-201ENST00000265038 F8W1H4 67 aa4.28□□□□□ -1.72
ERCC8-201ENST00000265038 HRES1P13985 223 aa4.28□□□□□ -1.72
ERCC8-201ENST00000265038 LINC00846Q9NV44 126 aa4.28□□□□□ -1.73
ERCC8-201ENST00000265038 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
ERCC8-201ENST00000265038 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
ERCC8-201ENST00000265038 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
ERCC8-201ENST00000265038 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
ERCC8-201ENST00000265038 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
ERCC8-201ENST00000265038 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
ERCC8-201ENST00000265038 M0R2T5 61 aa4.26□□□□□ -1.73
ERCC8-201ENST00000265038 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
ERCC8-201ENST00000265038 Q8N9L7 120 aa4.26□□□□□ -1.73
ERCC8-201ENST00000265038 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
ERCC8-201ENST00000265038 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
ERCC8-201ENST00000265038 SPINK7P58062 85 aa4.24□□□□□ -1.73
ERCC8-201ENST00000265038 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
ERCC8-201ENST00000265038 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
ERCC8-201ENST00000265038 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
ERCC8-201ENST00000265038 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
ERCC8-201ENST00000265038 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
ERCC8-201ENST00000265038 NDUFS5O43920 106 aa4.21□□□□□ -1.74
ERCC8-201ENST00000265038 CASC2Q6XLA1 102 aa4.21□□□□□ -1.74
ERCC8-201ENST00000265038 Q5W150 140 aa4.19□□□□□ -1.74
ERCC8-201ENST00000265038 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
ERCC8-201ENST00000265038 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
ERCC8-201ENST00000265038 CXCL6P80162 114 aa4.16□□□□□ -1.74
ERCC8-201ENST00000265038 A0A1B0GV90 55 aa4.16□□□□□ -1.74
ERCC8-201ENST00000265038 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.75
ERCC8-201ENST00000265038 ACYP1P07311 99 aa4.14□□□□□ -1.75
ERCC8-201ENST00000265038 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
ERCC8-201ENST00000265038 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
ERCC8-201ENST00000265038 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
ERCC8-201ENST00000265038 FAM240AA0A1B0GVK7 77 aa4.13□□□□□ -1.75
ERCC8-201ENST00000265038 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
ERCC8-201ENST00000265038 PCP4P48539 62 aa4.12□□□□□ -1.75
ERCC8-201ENST00000265038 C7orf65Q6ZTY9 151 aa4.12□□□□□ -1.75
ERCC8-201ENST00000265038 MT2AP02795 61 aa4.1□□□□□ -1.75
ERCC8-201ENST00000265038 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.76
ERCC8-201ENST00000265038 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
ERCC8-201ENST00000265038 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
ERCC8-201ENST00000265038 MT1FP04733 61 aa4.07□□□□□ -1.76
ERCC8-201ENST00000265038 C4orf26Q17RF5 130 aa4.07□□□□□ -1.76
ERCC8-201ENST00000265038 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
ERCC8-201ENST00000265038 LINC00643Q86TS7 51 aa4.05□□□□□ -1.76
ERCC8-201ENST00000265038 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
ERCC8-201ENST00000265038 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
ERCC8-201ENST00000265038 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
ERCC8-201ENST00000265038 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
ERCC8-201ENST00000265038 A0A087WVE0 104 aa4.02□□□□□ -1.77
ERCC8-201ENST00000265038 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
ERCC8-201ENST00000265038 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
ERCC8-201ENST00000265038 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
ERCC8-201ENST00000265038 TRAV22A0A0B4J277 110 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms