RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
HOXC12-201ENST00000243103 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
HOXC12-201ENST00000243103 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
HOXC12-201ENST00000243103 CIRBP-AS1Q8TBR5 109 aa9.09□□□□□ -0.95
HOXC12-201ENST00000243103 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
HOXC12-201ENST00000243103 Q6ZR54 194 aa9.09□□□□□ -0.95
HOXC12-201ENST00000243103 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
HOXC12-201ENST00000243103 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
HOXC12-201ENST00000243103 DNAH7Q8WXX0 4024 aa9.06□□□□□ -0.96
HOXC12-201ENST00000243103 H3BNG1 76 aa9.04□□□□□ -0.96
HOXC12-201ENST00000243103 ACYP2P14621 99 aa9.04□□□□□ -0.96
HOXC12-201ENST00000243103 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
HOXC12-201ENST00000243103 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
HOXC12-201ENST00000243103 DNAH9Q9NYC9 4486 aa9.01□□□□□ -0.97
HOXC12-201ENST00000243103 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
HOXC12-201ENST00000243103 HUWE1Q7Z6Z7 4374 aaKnown RBP8.99□□□□□ -0.97
HOXC12-201ENST00000243103 UQCR11O14957 56 aa8.98□□□□□ -0.97
HOXC12-201ENST00000243103 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
HOXC12-201ENST00000243103 PLA2G1BP04054 148 aaKnown RBP8.94□□□□□ -0.98
HOXC12-201ENST00000243103 Q8N1X5 172 aa8.93□□□□□ -0.98
HOXC12-201ENST00000243103 PLAC8Q9NZF1 115 aa8.93□□□□□ -0.98
HOXC12-201ENST00000243103 FRAS1Q86XX4 4008 aa8.92□□□□□ -0.98
HOXC12-201ENST00000243103 LY6G6CO95867 125 aa8.9□□□□□ -0.98
HOXC12-201ENST00000243103 Q96NJ1 140 aa8.9□□□□□ -0.98
HOXC12-201ENST00000243103 PLECQ15149 4684 aaKnown RBP8.89□□□□□ -0.99
HOXC12-201ENST00000243103 CMYA5Q8N3K9 4069 aa8.88□□□□□ -0.99
HOXC12-201ENST00000243103 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
HOXC12-201ENST00000243103 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
HOXC12-201ENST00000243103 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
HOXC12-201ENST00000243103 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
HOXC12-201ENST00000243103 SPRR1BP22528 89 aa8.79□□□□□ -1
HOXC12-201ENST00000243103 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
HOXC12-201ENST00000243103 APLNQ9ULZ1 77 aa8.79□□□□□ -1
HOXC12-201ENST00000243103 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
HOXC12-201ENST00000243103 SPACA4Q8TDM5 124 aa8.77□□□□□ -1.01
HOXC12-201ENST00000243103 STARD9Q9P2P6 4700 aa8.74□□□□□ -1.01
HOXC12-201ENST00000243103 DNHD1Q96M86 4753 aa8.74□□□□□ -1.01
HOXC12-201ENST00000243103 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
HOXC12-201ENST00000243103 ZNF861PO60384 105 aa8.72□□□□□ -1.01
HOXC12-201ENST00000243103 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
HOXC12-201ENST00000243103 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.01
HOXC12-201ENST00000243103 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
HOXC12-201ENST00000243103 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
HOXC12-201ENST00000243103 WWC2-AS2Q96NR7 200 aa8.7□□□□□ -1.02
HOXC12-201ENST00000243103 ROMO1P60602 79 aa8.68□□□□□ -1.02
HOXC12-201ENST00000243103 A0A087WTM6 91 aa8.67□□□□□ -1.02
HOXC12-201ENST00000243103 DNAH8Q96JB1 4490 aa8.63□□□□□ -1.03
HOXC12-201ENST00000243103 A0A0D9SG42 100 aa8.63□□□□□ -1.03
HOXC12-201ENST00000243103 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
HOXC12-201ENST00000243103 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
HOXC12-201ENST00000243103 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
HOXC12-201ENST00000243103 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
HOXC12-201ENST00000243103 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
HOXC12-201ENST00000243103 A8MUU9 505 aa8.6□□□□□ -1.03
HOXC12-201ENST00000243103 DNAH6Q9C0G6 4158 aa8.6□□□□□ -1.03
HOXC12-201ENST00000243103 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
HOXC12-201ENST00000243103 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
HOXC12-201ENST00000243103 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
HOXC12-201ENST00000243103 LINC00304Q8N9R0 145 aa8.58□□□□□ -1.04
HOXC12-201ENST00000243103 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
HOXC12-201ENST00000243103 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
HOXC12-201ENST00000243103 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
HOXC12-201ENST00000243103 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
HOXC12-201ENST00000243103 H0YAA0 97 aa8.52□□□□□ -1.04
HOXC12-201ENST00000243103 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.04
HOXC12-201ENST00000243103 Q6ZSA8 131 aa8.52□□□□□ -1.05
HOXC12-201ENST00000243103 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
HOXC12-201ENST00000243103 P0C880 135 aa8.51□□□□□ -1.05
HOXC12-201ENST00000243103 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
HOXC12-201ENST00000243103 A0A1B0GU33 70 aa8.5□□□□□ -1.05
HOXC12-201ENST00000243103 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
HOXC12-201ENST00000243103 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
HOXC12-201ENST00000243103 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
HOXC12-201ENST00000243103 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
HOXC12-201ENST00000243103 K7ERS5 55 aa8.47□□□□□ -1.05
HOXC12-201ENST00000243103 DNAH3Q8TD57 4116 aa8.46□□□□□ -1.06
HOXC12-201ENST00000243103 ALMS1Q8TCU4 4167 aa8.44□□□□□ -1.06
HOXC12-201ENST00000243103 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
HOXC12-201ENST00000243103 HECTD4Q9Y4D8 3996 aa8.4□□□□□ -1.06
HOXC12-201ENST00000243103 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
HOXC12-201ENST00000243103 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
HOXC12-201ENST00000243103 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
HOXC12-201ENST00000243103 FAT1Q14517 4588 aa8.34□□□□□ -1.07
HOXC12-201ENST00000243103 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
HOXC12-201ENST00000243103 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
HOXC12-201ENST00000243103 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
HOXC12-201ENST00000243103 FAT2Q9NYQ8 4349 aa8.28□□□□□ -1.08
HOXC12-201ENST00000243103 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
HOXC12-201ENST00000243103 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.09
HOXC12-201ENST00000243103 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
HOXC12-201ENST00000243103 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
HOXC12-201ENST00000243103 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
HOXC12-201ENST00000243103 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
HOXC12-201ENST00000243103 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.1
HOXC12-201ENST00000243103 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
HOXC12-201ENST00000243103 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
HOXC12-201ENST00000243103 KRTAP3-1Q9BYR8 98 aa8.04□□□□□ -1.12
HOXC12-201ENST00000243103 DYNC2H1Q8NCM8 4307 aaKnown RBP8.04□□□□□ -1.12
HOXC12-201ENST00000243103 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.13
HOXC12-201ENST00000243103 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms