RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.9
DUSP4-201ENST00000240100 BOD1L1Q8NFC6 3051 aa9.4□□□□□ -0.9
DUSP4-201ENST00000240100 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
DUSP4-201ENST00000240100 FRYLO94915 3013 aa9.39□□□□□ -0.91
DUSP4-201ENST00000240100 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
DUSP4-201ENST00000240100 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
DUSP4-201ENST00000240100 DMXL2Q8TDJ6 3036 aa9.36□□□□□ -0.91
DUSP4-201ENST00000240100 KRTAP1-4P0C5Y4 121 aa9.36□□□□□ -0.91
DUSP4-201ENST00000240100 APCP25054 2843 aa9.35□□□□□ -0.91
DUSP4-201ENST00000240100 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
DUSP4-201ENST00000240100 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
DUSP4-201ENST00000240100 FREM2Q5SZK8 3169 aa9.33□□□□□ -0.92
DUSP4-201ENST00000240100 HRNRQ86YZ3 2850 aaPredicted RBP9.33□□□□□ -0.92
DUSP4-201ENST00000240100 EYSQ5T1H1 3165 aa9.32□□□□□ -0.92
DUSP4-201ENST00000240100 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.93
DUSP4-201ENST00000240100 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
DUSP4-201ENST00000240100 TACC2O95359 2948 aa9.23□□□□□ -0.93
DUSP4-201ENST00000240100 REV3LO60673 3130 aa9.19□□□□□ -0.94
DUSP4-201ENST00000240100 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
DUSP4-201ENST00000240100 USP34Q70CQ2 3546 aa9.17□□□□□ -0.94
DUSP4-201ENST00000240100 H0YAA0 97 aa9.13□□□□□ -0.95
DUSP4-201ENST00000240100 XP32Q5T750 250 aa9.13□□□□□ -0.95
DUSP4-201ENST00000240100 TENM4Q6N022 2769 aa9.13□□□□□ -0.95
DUSP4-201ENST00000240100 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
DUSP4-201ENST00000240100 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
DUSP4-201ENST00000240100 NDUFAF8A1L188 74 aa9.08□□□□□ -0.96
DUSP4-201ENST00000240100 ZANQ9Y493 2812 aa9.07□□□□□ -0.96
DUSP4-201ENST00000240100 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
DUSP4-201ENST00000240100 TNP1P09430 55 aa9.04□□□□□ -0.96
DUSP4-201ENST00000240100 SPEGQ15772 3267 aa9.04□□□□□ -0.96
DUSP4-201ENST00000240100 CFAP47Q6ZTR5 3102 aa9.02□□□□□ -0.97
DUSP4-201ENST00000240100 CELSR2Q9HCU4 2923 aa8.99□□□□□ -0.97
DUSP4-201ENST00000240100 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
DUSP4-201ENST00000240100 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
DUSP4-201ENST00000240100 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
DUSP4-201ENST00000240100 CRYBG3Q68DQ2 2970 aa8.93□□□□□ -0.98
DUSP4-201ENST00000240100 DCHS2Q6V1P9 2916 aa8.92□□□□□ -0.98
DUSP4-201ENST00000240100 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.98
DUSP4-201ENST00000240100 FBN2P35556 2912 aa8.86□□□□□ -0.99
DUSP4-201ENST00000240100 P0C880 135 aa8.8□□□□□ -1
DUSP4-201ENST00000240100 MYO15AQ9UKN7 3530 aa8.75□□□□□ -1.01
DUSP4-201ENST00000240100 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
DUSP4-201ENST00000240100 NF1P21359 2839 aa8.73□□□□□ -1.01
DUSP4-201ENST00000240100 MXRA5Q9NR99 2828 aa8.72□□□□□ -1.01
DUSP4-201ENST00000240100 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
DUSP4-201ENST00000240100 PDZD2O15018 2839 aa8.66□□□□□ -1.02
DUSP4-201ENST00000240100 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
DUSP4-201ENST00000240100 TENM3Q9P273 2699 aa8.62□□□□□ -1.03
DUSP4-201ENST00000240100 RELNP78509 3460 aa8.54□□□□□ -1.04
DUSP4-201ENST00000240100 TGP01266 2768 aa8.54□□□□□ -1.04
DUSP4-201ENST00000240100 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
DUSP4-201ENST00000240100 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
DUSP4-201ENST00000240100 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
DUSP4-201ENST00000240100 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
DUSP4-201ENST00000240100 ASPMQ8IZT6 3477 aa8.48□□□□□ -1.05
DUSP4-201ENST00000240100 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
DUSP4-201ENST00000240100 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.06
DUSP4-201ENST00000240100 ZFHX4Q86UP3 3567 aa8.46□□□□□ -1.06
DUSP4-201ENST00000240100 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
DUSP4-201ENST00000240100 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
DUSP4-201ENST00000240100 DCHS1Q96JQ0 3298 aa8.41□□□□□ -1.06
DUSP4-201ENST00000240100 OTOGQ6ZRI0 2925 aa8.39□□□□□ -1.07
DUSP4-201ENST00000240100 PRO2289Q9P1D8 64 aa8.37□□□□□ -1.07
DUSP4-201ENST00000240100 KRTAP13-4Q3LI77 160 aa8.36□□□□□ -1.07
DUSP4-201ENST00000240100 CSMD1Q96PZ7 3565 aa8.36□□□□□ -1.07
DUSP4-201ENST00000240100 LAMA5O15230 3695 aa8.3□□□□□ -1.08
DUSP4-201ENST00000240100 SMG1Q96Q15 3661 aaKnown RBP8.3□□□□□ -1.08
DUSP4-201ENST00000240100 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
DUSP4-201ENST00000240100 KRTAP10-6P60371 365 aaPredicted RBP8.27□□□□□ -1.09
DUSP4-201ENST00000240100 DMDP11532 3685 aa8.23□□□□□ -1.09
DUSP4-201ENST00000240100 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
DUSP4-201ENST00000240100 VWFP04275 2813 aa8.11□□□□□ -1.11
DUSP4-201ENST00000240100 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
DUSP4-201ENST00000240100 BSNQ9UPA5 3926 aa8.04□□□□□ -1.12
DUSP4-201ENST00000240100 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
DUSP4-201ENST00000240100 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
DUSP4-201ENST00000240100 HUWE1Q7Z6Z7 4374 aaKnown RBP8.01□□□□□ -1.13
DUSP4-201ENST00000240100 MUC3AQ02505 3323 aa7.98□□□□□ -1.13
DUSP4-201ENST00000240100 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
DUSP4-201ENST00000240100 SPENQ96T58 3664 aaKnown RBP7.97□□□□□ -1.13
DUSP4-201ENST00000240100 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
DUSP4-201ENST00000240100 ZFHX3Q15911 3703 aa7.94□□□□□ -1.14
DUSP4-201ENST00000240100 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
DUSP4-201ENST00000240100 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
DUSP4-201ENST00000240100 FBN3Q75N90 2809 aa7.88□□□□□ -1.15
DUSP4-201ENST00000240100 TRRAPQ9Y4A5 3859 aa7.85□□□□□ -1.15
DUSP4-201ENST00000240100 ALMS1Q8TCU4 4167 aa7.83□□□□□ -1.16
DUSP4-201ENST00000240100 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
DUSP4-201ENST00000240100 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
DUSP4-201ENST00000240100 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
DUSP4-201ENST00000240100 KRTAP4-5Q9BYR2 181 aa7.65□□□□□ -1.18
DUSP4-201ENST00000240100 VPS13CQ709C8 3753 aa7.64□□□□□ -1.19
DUSP4-201ENST00000240100 CUBNO60494 3623 aa7.64□□□□□ -1.19
DUSP4-201ENST00000240100 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
DUSP4-201ENST00000240100 AKAP9Q99996 3911 aa7.59□□□□□ -1.19
DUSP4-201ENST00000240100 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
DUSP4-201ENST00000240100 INE1O15225 51 aa7.56□□□□□ -1.2
DUSP4-201ENST00000240100 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
DUSP4-201ENST00000240100 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
DUSP4-201ENST00000240100 COL7A1Q02388 2944 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms