RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 A0A1B0GVX0 72 aa9.61□□□□□ -0.87
TVP23C-201ENST00000225576 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
TVP23C-201ENST00000225576 COX7CP15954 63 aa9.6□□□□□ -0.87
TVP23C-201ENST00000225576 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
TVP23C-201ENST00000225576 MMP24-AS1A0A0U1RRL7 71 aa9.58□□□□□ -0.88
TVP23C-201ENST00000225576 UQCRQO14949 82 aa9.58□□□□□ -0.88
TVP23C-201ENST00000225576 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
TVP23C-201ENST00000225576 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
TVP23C-201ENST00000225576 C8orf17Q9NRJ1 99 aa9.57□□□□□ -0.88
TVP23C-201ENST00000225576 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
TVP23C-201ENST00000225576 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
TVP23C-201ENST00000225576 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
TVP23C-201ENST00000225576 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
TVP23C-201ENST00000225576 HERC1Q15751 4861 aa9.54□□□□□ -0.88
TVP23C-201ENST00000225576 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
TVP23C-201ENST00000225576 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
TVP23C-201ENST00000225576 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
TVP23C-201ENST00000225576 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
TVP23C-201ENST00000225576 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
TVP23C-201ENST00000225576 LINC00313P59037 77 aa9.46□□□□□ -0.9
TVP23C-201ENST00000225576 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
TVP23C-201ENST00000225576 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-201ENST00000225576 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
TVP23C-201ENST00000225576 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
TVP23C-201ENST00000225576 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
TVP23C-201ENST00000225576 MT1HL1P0DM35 61 aa9.4□□□□□ -0.91
TVP23C-201ENST00000225576 OXTP01178 125 aa9.39□□□□□ -0.91
TVP23C-201ENST00000225576 KLKP1Q107X0 134 aa9.38□□□□□ -0.91
TVP23C-201ENST00000225576 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
TVP23C-201ENST00000225576 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
TVP23C-201ENST00000225576 NDUFS5O43920 106 aa9.36□□□□□ -0.91
TVP23C-201ENST00000225576 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
TVP23C-201ENST00000225576 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
TVP23C-201ENST00000225576 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
TVP23C-201ENST00000225576 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
TVP23C-201ENST00000225576 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
TVP23C-201ENST00000225576 SNURFQ9Y675 71 aa9.33□□□□□ -0.92
TVP23C-201ENST00000225576 MP68P56378 58 aa9.32□□□□□ -0.92
TVP23C-201ENST00000225576 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
TVP23C-201ENST00000225576 TRAV22A0A0B4J277 110 aa9.31□□□□□ -0.92
TVP23C-201ENST00000225576 H0Y9P7 68 aa9.31□□□□□ -0.92
TVP23C-201ENST00000225576 H3BPC8 53 aa9.31□□□□□ -0.92
TVP23C-201ENST00000225576 TNXBP22105 4242 aa9.3□□□□□ -0.92
TVP23C-201ENST00000225576 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
TVP23C-201ENST00000225576 FP248Q71RG6 208 aaPredicted RBP9.28□□□□□ -0.92
TVP23C-201ENST00000225576 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
TVP23C-201ENST00000225576 NDUFC1O43677 76 aa9.27□□□□□ -0.93
TVP23C-201ENST00000225576 H7BZZ5 65 aa9.26□□□□□ -0.93
TVP23C-201ENST00000225576 LINC00208Q96KT6 92 aa9.26□□□□□ -0.93
TVP23C-201ENST00000225576 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
TVP23C-201ENST00000225576 Q5W150 140 aa9.22□□□□□ -0.93
TVP23C-201ENST00000225576 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
TVP23C-201ENST00000225576 C9orf92A6NGG3 77 aa9.21□□□□□ -0.93
TVP23C-201ENST00000225576 TMEM258P61165 79 aa9.21□□□□□ -0.93
TVP23C-201ENST00000225576 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
TVP23C-201ENST00000225576 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
TVP23C-201ENST00000225576 A8MUU9 505 aa9.17□□□□□ -0.94
TVP23C-201ENST00000225576 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
TVP23C-201ENST00000225576 J3QL48 77 aa9.11□□□□□ -0.95
TVP23C-201ENST00000225576 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
TVP23C-201ENST00000225576 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
TVP23C-201ENST00000225576 Q75L30 129 aa9.1□□□□□ -0.95
TVP23C-201ENST00000225576 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
TVP23C-201ENST00000225576 PRR4Q16378 134 aa9.08□□□□□ -0.96
TVP23C-201ENST00000225576 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
TVP23C-201ENST00000225576 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
TVP23C-201ENST00000225576 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
TVP23C-201ENST00000225576 HMCN2Q8NDA2 5059 aa9.03□□□□□ -0.96
TVP23C-201ENST00000225576 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
TVP23C-201ENST00000225576 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
TVP23C-201ENST00000225576 XP32Q5T750 250 aa9.02□□□□□ -0.97
TVP23C-201ENST00000225576 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
TVP23C-201ENST00000225576 RPL37P61927 97 aaKnown RBP8.99□□□□□ -0.97
TVP23C-201ENST00000225576 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
TVP23C-201ENST00000225576 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
TVP23C-201ENST00000225576 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
TVP23C-201ENST00000225576 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
TVP23C-201ENST00000225576 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
TVP23C-201ENST00000225576 HRES1P13985 223 aa8.92□□□□□ -0.98
TVP23C-201ENST00000225576 SPINK7P58062 85 aa8.87□□□□□ -0.99
TVP23C-201ENST00000225576 DMAC1Q96GE9 116 aa8.8□□□□□ -1
TVP23C-201ENST00000225576 ACYP2P14621 99 aa8.76□□□□□ -1.01
TVP23C-201ENST00000225576 C4orf26Q17RF5 130 aa8.75□□□□□ -1.01
TVP23C-201ENST00000225576 COA5Q86WW8 74 aa8.75□□□□□ -1.01
TVP23C-201ENST00000225576 A8MUN3 132 aa8.72□□□□□ -1.01
TVP23C-201ENST00000225576 LRP2P98164 4655 aa8.71□□□□□ -1.02
TVP23C-201ENST00000225576 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
TVP23C-201ENST00000225576 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
TVP23C-201ENST00000225576 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
TVP23C-201ENST00000225576 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
TVP23C-201ENST00000225576 LPAP08519 4548 aa8.65□□□□□ -1.02
TVP23C-201ENST00000225576 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
TVP23C-201ENST00000225576 KRTAP3-1Q9BYR8 98 aa8.64□□□□□ -1.03
TVP23C-201ENST00000225576 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
TVP23C-201ENST00000225576 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
TVP23C-201ENST00000225576 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
TVP23C-201ENST00000225576 Q1T7F1 81 aa8.53□□□□□ -1.04
TVP23C-201ENST00000225576 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
TVP23C-201ENST00000225576 V9GYY9 64 aa8.5□□□□□ -1.05
TVP23C-201ENST00000225576 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms