RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 SVIPQ8NHG7 77 aa10.23□□□□□ -0.77
GCDH-201ENST00000222214 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.77
GCDH-201ENST00000222214 C8orf87E5RJ46 101 aa10.21□□□□□ -0.77
GCDH-201ENST00000222214 H0Y9P7 68 aa10.21□□□□□ -0.77
GCDH-201ENST00000222214 TYMSOSQ8TAI1 123 aa10.21□□□□□ -0.77
GCDH-201ENST00000222214 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
GCDH-201ENST00000222214 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.78
GCDH-201ENST00000222214 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
GCDH-201ENST00000222214 TRAV22A0A0B4J277 110 aa10.19□□□□□ -0.78
GCDH-201ENST00000222214 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
GCDH-201ENST00000222214 SPINK1P00995 79 aa10.18□□□□□ -0.78
GCDH-201ENST00000222214 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
GCDH-201ENST00000222214 SMR3BP02814 79 aaPredicted RBP10.16□□□□□ -0.78
GCDH-201ENST00000222214 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
GCDH-201ENST00000222214 KMT2CQ8NEZ4 4911 aaKnown RBP10.16□□□□□ -0.78
GCDH-201ENST00000222214 RYR2Q92736 4967 aa10.14□□□□□ -0.79
GCDH-201ENST00000222214 NDUFS5O43920 106 aa10.14□□□□□ -0.79
GCDH-201ENST00000222214 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
GCDH-201ENST00000222214 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
GCDH-201ENST00000222214 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
GCDH-201ENST00000222214 C1orf64Q8NEQ6 169 aa10.12□□□□□ -0.79
GCDH-201ENST00000222214 KRTAP10-4P60372 401 aaPredicted RBP10.1□□□□□ -0.79
GCDH-201ENST00000222214 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
GCDH-201ENST00000222214 LINC00313P59037 77 aa10.1□□□□□ -0.79
GCDH-201ENST00000222214 LINC00304Q8N9R0 145 aa10.09□□□□□ -0.79
GCDH-201ENST00000222214 PRR26Q8N8Z3 221 aa10.08□□□□□ -0.8
GCDH-201ENST00000222214 OXTP01178 125 aa10.07□□□□□ -0.8
GCDH-201ENST00000222214 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
GCDH-201ENST00000222214 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
GCDH-201ENST00000222214 APOBP04114 4563 aaKnown RBP10.01□□□□□ -0.81
GCDH-201ENST00000222214 Q8N9P0 234 aaPredicted RBP10.01□□□□□ -0.81
GCDH-201ENST00000222214 FAM229AH3BQW9 127 aa10□□□□□ -0.81
GCDH-201ENST00000222214 SMIM26A0A096LP01 95 aa9.98□□□□□ -0.81
GCDH-201ENST00000222214 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
GCDH-201ENST00000222214 RYR3Q15413 4870 aa9.96□□□□□ -0.81
GCDH-201ENST00000222214 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
GCDH-201ENST00000222214 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
GCDH-201ENST00000222214 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
GCDH-201ENST00000222214 Q5W150 140 aa9.92□□□□□ -0.82
GCDH-201ENST00000222214 PRR4Q16378 134 aa9.9□□□□□ -0.82
GCDH-201ENST00000222214 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
GCDH-201ENST00000222214 FAT1Q14517 4588 aa9.87□□□□□ -0.83
GCDH-201ENST00000222214 Q5VSD8 79 aa9.85□□□□□ -0.83
GCDH-201ENST00000222214 FP248Q71RG6 208 aaPredicted RBP9.84□□□□□ -0.83
GCDH-201ENST00000222214 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
GCDH-201ENST00000222214 IGKV2-30P06310 120 aa9.79□□□□□ -0.84
GCDH-201ENST00000222214 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
GCDH-201ENST00000222214 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
GCDH-201ENST00000222214 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
GCDH-201ENST00000222214 COA5Q86WW8 74 aa9.72□□□□□ -0.85
GCDH-201ENST00000222214 Q1T7F1 81 aa9.7□□□□□ -0.86
GCDH-201ENST00000222214 Q8N1X5 172 aa9.7□□□□□ -0.86
GCDH-201ENST00000222214 MPLKIPQ8TAP9 179 aa9.7□□□□□ -0.86
GCDH-201ENST00000222214 HSPG2P98160 4391 aa9.7□□□□□ -0.86
GCDH-201ENST00000222214 C20orf166-AS1Q96NR2 134 aa9.7□□□□□ -0.86
GCDH-201ENST00000222214 HRES1P13985 223 aa9.69□□□□□ -0.86
GCDH-201ENST00000222214 V9GYY9 64 aa9.69□□□□□ -0.86
GCDH-201ENST00000222214 A8MUU9 505 aa9.68□□□□□ -0.86
GCDH-201ENST00000222214 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
GCDH-201ENST00000222214 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
GCDH-201ENST00000222214 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
GCDH-201ENST00000222214 ACYP2P14621 99 aa9.64□□□□□ -0.87
GCDH-201ENST00000222214 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
GCDH-201ENST00000222214 C7orf65Q6ZTY9 151 aa9.63□□□□□ -0.87
GCDH-201ENST00000222214 RYR1P21817 5038 aa9.62□□□□□ -0.87
GCDH-201ENST00000222214 EPPK1P58107 5090 aaKnown RBP9.6□□□□□ -0.87
GCDH-201ENST00000222214 Q75L30 129 aa9.57□□□□□ -0.88
GCDH-201ENST00000222214 TNXBP22105 4242 aa9.56□□□□□ -0.88
GCDH-201ENST00000222214 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
GCDH-201ENST00000222214 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
GCDH-201ENST00000222214 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
GCDH-201ENST00000222214 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
GCDH-201ENST00000222214 LRP1Q07954 4544 aaKnown RBP9.5□□□□□ -0.89
GCDH-201ENST00000222214 A8MUN3 132 aa9.48□□□□□ -0.89
GCDH-201ENST00000222214 PSPHP1O15172 72 aa9.46□□□□□ -0.89
GCDH-201ENST00000222214 LINC01558Q9Y6Z2 57 aa9.46□□□□□ -0.9
GCDH-201ENST00000222214 FAT3Q8TDW7 4589 aa9.45□□□□□ -0.9
GCDH-201ENST00000222214 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
GCDH-201ENST00000222214 SPINK7P58062 85 aa9.41□□□□□ -0.9
GCDH-201ENST00000222214 ATP11AUNQ6ZP68 121 aa9.41□□□□□ -0.9
GCDH-201ENST00000222214 PRR15LQ9BU68 103 aa9.41□□□□□ -0.9
GCDH-201ENST00000222214 PRO0628Q9UI54 55 aa9.4□□□□□ -0.9
GCDH-201ENST00000222214 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
GCDH-201ENST00000222214 Q5VV11 94 aa9.39□□□□□ -0.91
GCDH-201ENST00000222214 XP32Q5T750 250 aa9.36□□□□□ -0.91
GCDH-201ENST00000222214 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
GCDH-201ENST00000222214 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
GCDH-201ENST00000222214 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
GCDH-201ENST00000222214 MYCBP2O75592 4640 aa9.27□□□□□ -0.93
GCDH-201ENST00000222214 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
GCDH-201ENST00000222214 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
GCDH-201ENST00000222214 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
GCDH-201ENST00000222214 A0A1B0GU69 56 aa9.21□□□□□ -0.93
GCDH-201ENST00000222214 A6NED7 52 aa9.21□□□□□ -0.94
GCDH-201ENST00000222214 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
GCDH-201ENST00000222214 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
GCDH-201ENST00000222214 J3QL48 77 aa9.1□□□□□ -0.95
GCDH-201ENST00000222214 SEC61GP60059 68 aa9.1□□□□□ -0.95
GCDH-201ENST00000222214 ABCA13Q86UQ4 5058 aa9.09□□□□□ -0.95
GCDH-201ENST00000222214 HERC2O95714 4834 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms