RNA–Protein interactions for RNA: ENST00000220584.8

FDFT1-201, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDFT1, Length 2,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-201ENST00000220584 TP53AIP1Q9HCN2 124 aa12.69□□□□□ -0.38
FDFT1-201ENST00000220584 LRP1BQ9NZR2 4599 aa12.67□□□□□ -0.38
FDFT1-201ENST00000220584 FAM229BQ4G0N7 80 aa12.66□□□□□ -0.38
FDFT1-201ENST00000220584 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
FDFT1-201ENST00000220584 A0A087X002 238 aa12.65□□□□□ -0.38
FDFT1-201ENST00000220584 A0A1B0GVY2 172 aa12.64□□□□□ -0.39
FDFT1-201ENST00000220584 C1orf64Q8NEQ6 169 aa12.64□□□□□ -0.39
FDFT1-201ENST00000220584 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
FDFT1-201ENST00000220584 C4orf26Q17RF5 130 aa12.63□□□□□ -0.39
FDFT1-201ENST00000220584 KRTAP13-2Q52LG2 175 aa12.63□□□□□ -0.39
FDFT1-201ENST00000220584 CYP4F30PQ9H0H9 118 aa12.63□□□□□ -0.39
FDFT1-201ENST00000220584 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
FDFT1-201ENST00000220584 NDUFS5O43920 106 aa12.6□□□□□ -0.39
FDFT1-201ENST00000220584 NOTCH2NLQ7Z3S9 236 aa12.6□□□□□ -0.39
FDFT1-201ENST00000220584 PRR4Q16378 134 aa12.57□□□□□ -0.4
FDFT1-201ENST00000220584 DYNC1H1Q14204 4646 aaKnown RBP12.56□□□□□ -0.4
FDFT1-201ENST00000220584 KRTAP1-4P0C5Y4 121 aa12.56□□□□□ -0.4
FDFT1-201ENST00000220584 SPANXA2-OT1Q8N9U9 137 aa12.56□□□□□ -0.4
FDFT1-201ENST00000220584 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
FDFT1-201ENST00000220584 RYR3Q15413 4870 aa12.55□□□□□ -0.4
FDFT1-201ENST00000220584 C8orf87E5RJ46 101 aa12.52□□□□□ -0.41
FDFT1-201ENST00000220584 C1orf195Q5TG92 126 aa12.46□□□□□ -0.41
FDFT1-201ENST00000220584 LIMD2Q9BT23 127 aa12.46□□□□□ -0.42
FDFT1-201ENST00000220584 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
FDFT1-201ENST00000220584 MPLKIPQ8TAP9 179 aa12.43□□□□□ -0.42
FDFT1-201ENST00000220584 PCOTHQ58A44 107 aa12.42□□□□□ -0.42
FDFT1-201ENST00000220584 LINC00313P59037 77 aa12.42□□□□□ -0.42
FDFT1-201ENST00000220584 TYMSOSQ8TAI1 123 aa12.41□□□□□ -0.42
FDFT1-201ENST00000220584 APOBP04114 4563 aaKnown RBP12.4□□□□□ -0.42
FDFT1-201ENST00000220584 IGLV7-46A0A075B6I9 117 aa12.4□□□□□ -0.42
FDFT1-201ENST00000220584 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
FDFT1-201ENST00000220584 SMR3BP02814 79 aaPredicted RBP12.36□□□□□ -0.43
FDFT1-201ENST00000220584 LOC101927531A0A1B0GV80 90 aa12.35□□□□□ -0.43
FDFT1-201ENST00000220584 KRTAP13-3Q3SY46 172 aa12.35□□□□□ -0.43
FDFT1-201ENST00000220584 Q5W150 140 aa12.35□□□□□ -0.43
FDFT1-201ENST00000220584 SPINK1P00995 79 aa12.33□□□□□ -0.44
FDFT1-201ENST00000220584 Q1T7F1 81 aa12.31□□□□□ -0.44
FDFT1-201ENST00000220584 Q8N9P0 234 aaPredicted RBP12.31□□□□□ -0.44
FDFT1-201ENST00000220584 FAT1Q14517 4588 aa12.28□□□□□ -0.44
FDFT1-201ENST00000220584 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
FDFT1-201ENST00000220584 FAM229AH3BQW9 127 aa12.26□□□□□ -0.45
FDFT1-201ENST00000220584 KRTAP16-1A8MUX0 517 aa12.26□□□□□ -0.45
FDFT1-201ENST00000220584 COA5Q86WW8 74 aa12.25□□□□□ -0.45
FDFT1-201ENST00000220584 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
FDFT1-201ENST00000220584 RPS29P62273 56 aaKnown RBP12.22□□□□□ -0.45
FDFT1-201ENST00000220584 SPAG11AQ6PDA7 123 aa12.21□□□□□ -0.45
FDFT1-201ENST00000220584 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
FDFT1-201ENST00000220584 V9GYY9 64 aa12.2□□□□□ -0.46
FDFT1-201ENST00000220584 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
FDFT1-201ENST00000220584 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
FDFT1-201ENST00000220584 HSPG2P98160 4391 aa12.11□□□□□ -0.47
FDFT1-201ENST00000220584 EPPK1P58107 5090 aaKnown RBP12.11□□□□□ -0.47
FDFT1-201ENST00000220584 PSPHP1O15172 72 aa12.11□□□□□ -0.47
FDFT1-201ENST00000220584 HRES1P13985 223 aa12.11□□□□□ -0.47
FDFT1-201ENST00000220584 PKHD1L1Q86WI1 4243 aa12.09□□□□□ -0.47
FDFT1-201ENST00000220584 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
FDFT1-201ENST00000220584 BRK1Q8WUW1 75 aa12.06□□□□□ -0.48
FDFT1-201ENST00000220584 RYR1P21817 5038 aa12.06□□□□□ -0.48
FDFT1-201ENST00000220584 A8MUN3 132 aa12.05□□□□□ -0.48
FDFT1-201ENST00000220584 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
FDFT1-201ENST00000220584 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
FDFT1-201ENST00000220584 ACYP2P14621 99 aa12.01□□□□□ -0.49
FDFT1-201ENST00000220584 DMAC1Q96GE9 116 aa11.99□□□□□ -0.49
FDFT1-201ENST00000220584 Q5VSD8 79 aa11.98□□□□□ -0.49
FDFT1-201ENST00000220584 Q5VV11 94 aa11.98□□□□□ -0.49
FDFT1-201ENST00000220584 IGKV2D-30A0A075B6S6 120 aa11.97□□□□□ -0.49
FDFT1-201ENST00000220584 PRR15LQ9BU68 103 aa11.97□□□□□ -0.49
FDFT1-201ENST00000220584 LINC01558Q9Y6Z2 57 aa11.92□□□□□ -0.5
FDFT1-201ENST00000220584 C9orf92A6NGG3 77 aa11.86□□□□□ -0.51
FDFT1-201ENST00000220584 CHKB-CPT1BH3BT56 60 aa11.86□□□□□ -0.51
FDFT1-201ENST00000220584 Q75L30 129 aa11.86□□□□□ -0.51
FDFT1-201ENST00000220584 C7orf65Q6ZTY9 151 aa11.85□□□□□ -0.51
FDFT1-201ENST00000220584 LRP1Q07954 4544 aaKnown RBP11.84□□□□□ -0.51
FDFT1-201ENST00000220584 C20orf166-AS1Q96NR2 134 aa11.84□□□□□ -0.51
FDFT1-201ENST00000220584 A8MUU9 505 aa11.83□□□□□ -0.52
FDFT1-201ENST00000220584 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
FDFT1-201ENST00000220584 Q8N1X5 172 aa11.81□□□□□ -0.52
FDFT1-201ENST00000220584 A6NED7 52 aa11.72□□□□□ -0.53
FDFT1-201ENST00000220584 KRTAP10-8P60410 259 aa11.72□□□□□ -0.53
FDFT1-201ENST00000220584 TNXBP22105 4242 aa11.72□□□□□ -0.53
FDFT1-201ENST00000220584 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
FDFT1-201ENST00000220584 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
FDFT1-201ENST00000220584 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
FDFT1-201ENST00000220584 A8MU10 97 aa11.64□□□□□ -0.55
FDFT1-201ENST00000220584 LCA10Q71F78 164 aa11.6□□□□□ -0.55
FDFT1-201ENST00000220584 SPINK7P58062 85 aa11.58□□□□□ -0.56
FDFT1-201ENST00000220584 CDC42SE1Q9NRR8 79 aa11.58□□□□□ -0.56
FDFT1-201ENST00000220584 DMBT1Q9UGM3 2413 aaPredicted RBP11.57□□□□□ -0.56
FDFT1-201ENST00000220584 A0A1B0GU69 56 aa11.56□□□□□ -0.56
FDFT1-201ENST00000220584 MT1HL1P0DM35 61 aa11.55□□□□□ -0.56
FDFT1-201ENST00000220584 BIRC6Q9NR09 4857 aa11.55□□□□□ -0.56
FDFT1-201ENST00000220584 ATP11AUNQ6ZP68 121 aa11.47□□□□□ -0.57
FDFT1-201ENST00000220584 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.58
FDFT1-201ENST00000220584 SPTSSBQ8NFR3 76 aa11.45□□□□□ -0.58
FDFT1-201ENST00000220584 HERC2O95714 4834 aa11.44□□□□□ -0.58
FDFT1-201ENST00000220584 KRTAP3-1Q9BYR8 98 aa11.43□□□□□ -0.58
FDFT1-201ENST00000220584 RPL37P61927 97 aaKnown RBP11.4□□□□□ -0.58
FDFT1-201ENST00000220584 PMAIP1Q13794 54 aa11.4□□□□□ -0.59
FDFT1-201ENST00000220584 XP32Q5T750 250 aa11.37□□□□□ -0.59
FDFT1-201ENST00000220584 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms