RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 BAHCC1Q9P281 2608 aa7.75□□□□□ -1.17
TGFBR3-201ENST00000212355 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-201ENST00000212355 ZZEF1O43149 2961 aa7.74□□□□□ -1.17
TGFBR3-201ENST00000212355 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
TGFBR3-201ENST00000212355 CSMD1Q96PZ7 3565 aa7.72□□□□□ -1.17
TGFBR3-201ENST00000212355 APCP25054 2843 aa7.68□□□□□ -1.18
TGFBR3-201ENST00000212355 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
TGFBR3-201ENST00000212355 UBR5O95071 2799 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-201ENST00000212355 LAMA5O15230 3695 aa7.68□□□□□ -1.18
TGFBR3-201ENST00000212355 HIVEP1P15822 2718 aa7.68□□□□□ -1.18
TGFBR3-201ENST00000212355 IGSF10Q6WRI0 2623 aa7.67□□□□□ -1.18
TGFBR3-201ENST00000212355 UTP20O75691 2785 aaKnown RBP7.65□□□□□ -1.18
TGFBR3-201ENST00000212355 A8MUU9 505 aa7.65□□□□□ -1.19
TGFBR3-201ENST00000212355 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
TGFBR3-201ENST00000212355 ITPR1Q14643 2758 aa7.64□□□□□ -1.19
TGFBR3-201ENST00000212355 A6NN06 94 aa7.64□□□□□ -1.19
TGFBR3-201ENST00000212355 ITPR2Q14571 2701 aa7.63□□□□□ -1.19
TGFBR3-201ENST00000212355 RELNP78509 3460 aa7.63□□□□□ -1.19
TGFBR3-201ENST00000212355 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
TGFBR3-201ENST00000212355 KRTAP25-1Q3LHN0 102 aa7.62□□□□□ -1.19
TGFBR3-201ENST00000212355 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
TGFBR3-201ENST00000212355 NSD1Q96L73 2696 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-201ENST00000212355 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
TGFBR3-201ENST00000212355 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
TGFBR3-201ENST00000212355 TNRC18O15417 2968 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-201ENST00000212355 DMDP11532 3685 aa7.51□□□□□ -1.21
TGFBR3-201ENST00000212355 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
TGFBR3-201ENST00000212355 CELSR2Q9HCU4 2923 aa7.5□□□□□ -1.21
TGFBR3-201ENST00000212355 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
TGFBR3-201ENST00000212355 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
TGFBR3-201ENST00000212355 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
TGFBR3-201ENST00000212355 SMG1Q96Q15 3661 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-201ENST00000212355 KMT2BQ9UMN6 2715 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-201ENST00000212355 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
TGFBR3-201ENST00000212355 NBPF19A0A087WUL8 3843 aa7.41□□□□□ -1.22
TGFBR3-201ENST00000212355 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.23
TGFBR3-201ENST00000212355 FLNCQ14315 2725 aa7.37□□□□□ -1.23
TGFBR3-201ENST00000212355 DCHS2Q6V1P9 2916 aa7.36□□□□□ -1.23
TGFBR3-201ENST00000212355 CUBNO60494 3623 aa7.34□□□□□ -1.23
TGFBR3-201ENST00000212355 FBN2P35556 2912 aa7.33□□□□□ -1.24
TGFBR3-201ENST00000212355 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-201ENST00000212355 HRNRQ86YZ3 2850 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-201ENST00000212355 SPENQ96T58 3664 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-201ENST00000212355 ZANQ9Y493 2812 aa7.29□□□□□ -1.24
TGFBR3-201ENST00000212355 TNP1P09430 55 aa7.27□□□□□ -1.25
TGFBR3-201ENST00000212355 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
TGFBR3-201ENST00000212355 H0YAA0 97 aa7.24□□□□□ -1.25
TGFBR3-201ENST00000212355 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.25
TGFBR3-201ENST00000212355 XP32Q5T750 250 aa7.21□□□□□ -1.25
TGFBR3-201ENST00000212355 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
TGFBR3-201ENST00000212355 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
TGFBR3-201ENST00000212355 NF1P21359 2839 aa7.12□□□□□ -1.27
TGFBR3-201ENST00000212355 P0C880 135 aa7.09□□□□□ -1.27
TGFBR3-201ENST00000212355 MUC3AQ02505 3323 aa7.05□□□□□ -1.28
TGFBR3-201ENST00000212355 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
TGFBR3-201ENST00000212355 CSMD2Q7Z408 3487 aa7.03□□□□□ -1.28
TGFBR3-201ENST00000212355 NIPBLQ6KC79 2804 aaeCLIP7.02□□□□□ -1.28
TGFBR3-201ENST00000212355 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
TGFBR3-201ENST00000212355 TENM1Q9UKZ4 2725 aa6.98□□□□□ -1.29
TGFBR3-201ENST00000212355 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.29
TGFBR3-201ENST00000212355 TENM2Q9NT68 2774 aa6.96□□□□□ -1.29
TGFBR3-201ENST00000212355 PKD1L1Q8TDX9 2849 aa6.95□□□□□ -1.3
TGFBR3-201ENST00000212355 TGP01266 2768 aa6.94□□□□□ -1.3
TGFBR3-201ENST00000212355 VWFP04275 2813 aa6.9□□□□□ -1.3
TGFBR3-201ENST00000212355 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
TGFBR3-201ENST00000212355 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
TGFBR3-201ENST00000212355 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
TGFBR3-201ENST00000212355 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
TGFBR3-201ENST00000212355 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
TGFBR3-201ENST00000212355 BSNQ9UPA5 3926 aa6.79□□□□□ -1.32
TGFBR3-201ENST00000212355 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
TGFBR3-201ENST00000212355 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
TGFBR3-201ENST00000212355 PDZD2O15018 2839 aa6.72□□□□□ -1.33
TGFBR3-201ENST00000212355 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.33
TGFBR3-201ENST00000212355 TRRAPQ9Y4A5 3859 aa6.71□□□□□ -1.33
TGFBR3-201ENST00000212355 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
TGFBR3-201ENST00000212355 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
TGFBR3-201ENST00000212355 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-201ENST00000212355 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
TGFBR3-201ENST00000212355 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
TGFBR3-201ENST00000212355 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
TGFBR3-201ENST00000212355 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-201ENST00000212355 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-201ENST00000212355 FBN3Q75N90 2809 aa6.43□□□□□ -1.38
TGFBR3-201ENST00000212355 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
TGFBR3-201ENST00000212355 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
TGFBR3-201ENST00000212355 MEGF8Q7Z7M0 2845 aa6.39□□□□□ -1.39
TGFBR3-201ENST00000212355 OTOGQ6ZRI0 2925 aa6.37□□□□□ -1.39
TGFBR3-201ENST00000212355 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-201ENST00000212355 AKAP9Q99996 3911 aa6.35□□□□□ -1.39
TGFBR3-201ENST00000212355 COL7A1Q02388 2944 aa6.31□□□□□ -1.4
TGFBR3-201ENST00000212355 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-201ENST00000212355 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.41
TGFBR3-201ENST00000212355 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
TGFBR3-201ENST00000212355 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
TGFBR3-201ENST00000212355 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
TGFBR3-201ENST00000212355 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
TGFBR3-201ENST00000212355 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
TGFBR3-201ENST00000212355 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
TGFBR3-201ENST00000212355 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms