RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
SLC22A4-201ENST00000200652 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
SLC22A4-201ENST00000200652 C1orf64Q8NEQ6 169 aa10.56□□□□□ -0.72
SLC22A4-201ENST00000200652 TP53AIP1Q9HCN2 124 aa10.56□□□□□ -0.72
SLC22A4-201ENST00000200652 FAM229BQ4G0N7 80 aa10.56□□□□□ -0.72
SLC22A4-201ENST00000200652 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
SLC22A4-201ENST00000200652 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
SLC22A4-201ENST00000200652 PRR4Q16378 134 aa10.53□□□□□ -0.72
SLC22A4-201ENST00000200652 SACSQ9NZJ4 4579 aa10.51□□□□□ -0.73
SLC22A4-201ENST00000200652 NDUFS5O43920 106 aa10.51□□□□□ -0.73
SLC22A4-201ENST00000200652 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
SLC22A4-201ENST00000200652 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
SLC22A4-201ENST00000200652 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
SLC22A4-201ENST00000200652 C1orf195Q5TG92 126 aa10.42□□□□□ -0.74
SLC22A4-201ENST00000200652 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
SLC22A4-201ENST00000200652 PLA2G1BP04054 148 aaKnown RBP10.4□□□□□ -0.74
SLC22A4-201ENST00000200652 LINC00336Q6ZUF6 198 aa10.4□□□□□ -0.74
SLC22A4-201ENST00000200652 MPLKIPQ8TAP9 179 aa10.4□□□□□ -0.74
SLC22A4-201ENST00000200652 PKHD1P08F94 4074 aa10.39□□□□□ -0.75
SLC22A4-201ENST00000200652 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
SLC22A4-201ENST00000200652 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
SLC22A4-201ENST00000200652 LINC00313P59037 77 aa10.35□□□□□ -0.75
SLC22A4-201ENST00000200652 Q5W150 140 aa10.35□□□□□ -0.75
SLC22A4-201ENST00000200652 LIMD2Q9BT23 127 aa10.35□□□□□ -0.75
SLC22A4-201ENST00000200652 TYMSOSQ8TAI1 123 aa10.34□□□□□ -0.75
SLC22A4-201ENST00000200652 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
SLC22A4-201ENST00000200652 DYNC1H1Q14204 4646 aaKnown RBP10.33□□□□□ -0.76
SLC22A4-201ENST00000200652 A0A1B0GVY2 172 aa10.33□□□□□ -0.76
SLC22A4-201ENST00000200652 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
SLC22A4-201ENST00000200652 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
SLC22A4-201ENST00000200652 LOC101927531A0A1B0GV80 90 aa10.29□□□□□ -0.76
SLC22A4-201ENST00000200652 Q1T7F1 81 aa10.28□□□□□ -0.76
SLC22A4-201ENST00000200652 Q8N9P0 234 aaPredicted RBP10.28□□□□□ -0.76
SLC22A4-201ENST00000200652 SPINK1P00995 79 aa10.27□□□□□ -0.76
SLC22A4-201ENST00000200652 PRR26Q8N8Z3 221 aa10.26□□□□□ -0.77
SLC22A4-201ENST00000200652 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
SLC22A4-201ENST00000200652 COA5Q86WW8 74 aa10.23□□□□□ -0.77
SLC22A4-201ENST00000200652 PRO0628Q9UI54 55 aa10.22□□□□□ -0.77
SLC22A4-201ENST00000200652 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
SLC22A4-201ENST00000200652 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.78
SLC22A4-201ENST00000200652 LINC00304Q8N9R0 145 aa10.21□□□□□ -0.78
SLC22A4-201ENST00000200652 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
SLC22A4-201ENST00000200652 RYR2Q92736 4967 aa10.18□□□□□ -0.78
SLC22A4-201ENST00000200652 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
SLC22A4-201ENST00000200652 RPS29P62273 56 aaKnown RBP10.17□□□□□ -0.78
SLC22A4-201ENST00000200652 FAT1Q14517 4588 aa10.16□□□□□ -0.78
SLC22A4-201ENST00000200652 SPAG11AQ6PDA7 123 aa10.15□□□□□ -0.78
SLC22A4-201ENST00000200652 V9GYY9 64 aa10.15□□□□□ -0.78
SLC22A4-201ENST00000200652 PSPHP1O15172 72 aa10.13□□□□□ -0.79
SLC22A4-201ENST00000200652 HRES1P13985 223 aa10.13□□□□□ -0.79
SLC22A4-201ENST00000200652 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
SLC22A4-201ENST00000200652 A8MUN3 132 aa10.08□□□□□ -0.8
SLC22A4-201ENST00000200652 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
SLC22A4-201ENST00000200652 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
SLC22A4-201ENST00000200652 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
SLC22A4-201ENST00000200652 Q5VV11 94 aa10.02□□□□□ -0.81
SLC22A4-201ENST00000200652 ACYP2P14621 99 aa10.01□□□□□ -0.81
SLC22A4-201ENST00000200652 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
SLC22A4-201ENST00000200652 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
SLC22A4-201ENST00000200652 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
SLC22A4-201ENST00000200652 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
SLC22A4-201ENST00000200652 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
SLC22A4-201ENST00000200652 CHKB-CPT1BH3BT56 60 aa9.9□□□□□ -0.82
SLC22A4-201ENST00000200652 Q75L30 129 aa9.89□□□□□ -0.83
SLC22A4-201ENST00000200652 A8MUU9 505 aa9.87□□□□□ -0.83
SLC22A4-201ENST00000200652 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
SLC22A4-201ENST00000200652 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
SLC22A4-201ENST00000200652 Q8N1X5 172 aa9.83□□□□□ -0.84
SLC22A4-201ENST00000200652 Q5VSD8 79 aa9.82□□□□□ -0.84
SLC22A4-201ENST00000200652 HSPG2P98160 4391 aa9.82□□□□□ -0.84
SLC22A4-201ENST00000200652 FLG2Q5D862 2391 aaPredicted RBP9.81□□□□□ -0.84
SLC22A4-201ENST00000200652 RYR3Q15413 4870 aa9.8□□□□□ -0.84
SLC22A4-201ENST00000200652 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
SLC22A4-201ENST00000200652 A8MU10 97 aa9.79□□□□□ -0.84
SLC22A4-201ENST00000200652 SEC61GP60059 68 aa9.79□□□□□ -0.84
SLC22A4-201ENST00000200652 TNXBP22105 4242 aa9.78□□□□□ -0.84
SLC22A4-201ENST00000200652 A6NED7 52 aa9.78□□□□□ -0.84
SLC22A4-201ENST00000200652 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.84
SLC22A4-201ENST00000200652 FAT3Q8TDW7 4589 aa9.75□□□□□ -0.85
SLC22A4-201ENST00000200652 LCA10Q71F78 164 aa9.73□□□□□ -0.85
SLC22A4-201ENST00000200652 KRTAP17-1Q9BYP8 105 aa9.72□□□□□ -0.85
SLC22A4-201ENST00000200652 RYR1P21817 5038 aa9.71□□□□□ -0.85
SLC22A4-201ENST00000200652 SPINK7P58062 85 aa9.7□□□□□ -0.86
SLC22A4-201ENST00000200652 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
SLC22A4-201ENST00000200652 A0A1B0GU69 56 aa9.64□□□□□ -0.87
SLC22A4-201ENST00000200652 PMAIP1Q13794 54 aa9.63□□□□□ -0.87
SLC22A4-201ENST00000200652 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
SLC22A4-201ENST00000200652 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
SLC22A4-201ENST00000200652 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
SLC22A4-201ENST00000200652 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
SLC22A4-201ENST00000200652 MT1HL1P0DM35 61 aa9.54□□□□□ -0.88
SLC22A4-201ENST00000200652 DMBT1Q9UGM3 2413 aaPredicted RBP9.54□□□□□ -0.88
SLC22A4-201ENST00000200652 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
SLC22A4-201ENST00000200652 XP32Q5T750 250 aa9.49□□□□□ -0.89
SLC22A4-201ENST00000200652 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
SLC22A4-201ENST00000200652 MYCBP2O75592 4640 aa9.45□□□□□ -0.9
SLC22A4-201ENST00000200652 EPPK1P58107 5090 aaKnown RBP9.44□□□□□ -0.9
SLC22A4-201ENST00000200652 UQCR11O14957 56 aa9.43□□□□□ -0.9
SLC22A4-201ENST00000200652 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
SLC22A4-201ENST00000200652 A6NN06 94 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms