RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Pcm1Q9R0L6 2025 aa4.68□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Dock6Q8VDR9 2080 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 1110002E22RikE0CYV9 1786 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Igkv3-1A0A075B5P1 119 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Erdr1J3QMM0 206 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P01655 112 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P01802 115 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P18530 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Edn3P48299 214 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ube2e1P52482 193 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Foxs1Q61574 329 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Mcm3apQ9WUU9 1971 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Prune2Q52KR3 3084 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Abca1P41233 2261 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv5-9A0A075B5Q2 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Trav6d-5A0A075B6B9 112 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P01812 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Il9P15247 144 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 SelenowP63300 88 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Fam19a2Q7TPG7 131 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 EppinQ9DA01 134 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Dock4P59764 1978 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv5-17A0A075B5R1 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Trav4-3A0A0B4J1K1 110 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm14548E9Q1Z6 680 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 CrygsO35486 178 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P03980 138 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P18526 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm10645Q3UPY1 145 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Zfp420Q7TMN8 578 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ntf4Q80VU4 209 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Plxna2P70207 1894 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv5-4A0A075B5P9 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv1-58A0A075B5W9 117 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Igkv13-84A0A140T8N3 115 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Zfp648D3Z0W3 525 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Spsb2O88838 264 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P01724 129 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Cox7cP17665 63 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Vdac2Q60930 295 aaKnown RBP4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 A730015C16RikQ8C992 119 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Rnase2aQ8K196 155 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Q99M08 65 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gkn1Q9CR36 201 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Rita1Q9D1H0 253 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 4930447A16RikQ9D5F6 132 aa4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Lsm4Q9QXA5 137 aaKnown RBP4.67□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Igkv1-99F6XWB2 120 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gata2O09100 480 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 H2-DMb1P35737 261 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Fgf16Q9ESL8 207 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 D930048N14RikA2AA67 225 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm20538F6Z9R1 75 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 PdpnQ62011 172 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ypel4Q65Z93 127 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm11733Q8BQP1 125 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ormdl1Q921I0 153 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Tnfrsf12aQ9CR75 129 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv7-1A0A075B5S2 121 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ighv1-76A0A0G2JFE9 117 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Thap8E9Q695 213 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P04946 108 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Zfp36P22893 319 aaKnown RBP4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Cdkn1aP39689 159 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm17334Q8C6U3 126 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 1700001C19RikQ8K168 210 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Arid1aA2BH40 2283 aaKnown RBP4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm37389A0A0A6YW05 95 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Tm2d3Q8BJ83 261 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ndufb4Q9CQC7 129 aa4.66□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm21616B6ZB74 166 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm6871L7N248 545 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Fgf6P21658 208 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Rbm38Q62176 237 aaKnown RBP4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Znf474Q6V5K9 347 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Chchd5Q9CQP3 110 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 RlfA2A7F4 1918 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Trav11A0A0B4J1J9 114 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Atox1O08997 68 aaKnown RBP4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 P84750 121 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Ppp1r32Q148A4 427 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Klk9Q32M27 251 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Gm9945Q8BNZ3 91 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 TifabQ8JZM6 147 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 5530401A14RikQ9D3H9 131 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Prr30Q9D9B7 401 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 Nupr1Q9WTK0 80 aa4.65□□□□□ -1.66
Pcdh9-202ENSMUST00000192221 BptfA2A654 3036 aaKnown RBP4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm2381G3UY53 305 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Fgf4P11403 202 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Mpv17P19258 176 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 SlpiP97430 131 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 C1qtnf5Q8K479 243 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Vsig4F6TUL9 280 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ifitm7G3X9Z2 141 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 LtaP09225 202 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Spaca3Q9D9X8 221 aa4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Mrps11Q9DCA2 191 aaKnown RBP4.65□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Igkv8-16A0A0G2JDG9 121 aa4.64□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm4791J3QQ14 102 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms