RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Trav6-6A0A075B603 114 aa12.1□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Timm8bP62077 83 aaKnown RBP12.1□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Hsbp1l1B2RXB2 72 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 1700056E22RikF7CNM6 234 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Gm15292L7N231 93 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 P01791 123 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Siah2Q06986 325 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Defa26Q3L180 93 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Spint3Q3UW09 88 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 QrfpQ8CE23 124 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Olfr1012Q8VFJ7 311 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Tmem141A2AJB2 108 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Casp6O08738 276 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Trdv2-2Q5R1A4 116 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Cox7a2lQ61387 111 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Gm10118Q8C8J5 116 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Bub3Q9WVA3 326 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Gm15294V9GXA7 121 aa12.09□□□□□ -0.47
Sdc1-205ENSMUST00000171158 Rps20P60867 119 aaKnown RBP12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Q24JP4 165 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 AW146154Q3TPQ7 468 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Nbl1Q61477 178 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 AhspQ9CY02 102 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Npc2Q9Z0J0 149 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Prrc2cQ3TLH4 2846 aaKnown RBP12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Igkv4-59A0A0B4J1I8 117 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm5426J3QNM7 103 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm5941Q497P9 117 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Scnm1Q8K136 229 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Trpt1Q8K3A2 249 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ube2l6Q9QZU9 153 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 ApomQ9Z1R3 190 aa12.08□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv1-20A0A0A6YX66 117 aa12.07□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Trav14n-2A0A0G2JDF5 121 aa12.07□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm45623A0A1B0GSF6 103 aa12.07□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Obox7Q4KL20 218 aa12.07□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Card19Q9D1I2 183 aa12.07□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Tcrg-V6A0A075B5Y8 134 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ly6lH3BJG9 140 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Srsf2Q62093 221 aaKnown RBP12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Prima1Q810F0 153 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Malsu1Q9CWV0 228 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm17727E9Q4V7 109 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm20517G3UVU6 152 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 AponG3X9D6 251 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Prrx2Q06348 247 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm1968Q3T9I3 115 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 CnfnQ6PCW6 111 aa12.06□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Dopey2Q3UHQ6 2295 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv2-6A0A075B6A7 116 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Olfr365Q8VFT2 312 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Tmem160Q9D938 188 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Cxcl14Q9WUQ5 99 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm10775Q3V290 127 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm5105Q8C6Y9 112 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gtsf1lQ9CWD0 151 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Hyls1Q9CXX0 307 aa12.05□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Tstd1E9PY03 133 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Edn3P48299 214 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Crip3Q6Q6R3 243 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Sh3bgrl2Q8BG73 107 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Tmem11Q8BK08 190 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 A130051J06RikQ8CAU1 227 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Vmn1r63Q9EPT1 300 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ubr5Q80TP3 2792 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv1-53A0A075B5W3 117 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Trav6n-6A0A075B6B2 114 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Brs3O54798 399 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Pip4p1Q3TWL2 284 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ang6Q5GAN0 147 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Lamtor2Q9JHS3 125 aa12.04□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Cmya5Q70KF4 3739 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Trav21-dv12A0A075B6C4 109 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Omt2bD3YX29 119 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm5878E9PUB3 99 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Nat8f4G5E8L3 226 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 7420426K07RikQ3UX66 186 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm17334Q8C6U3 126 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv1-4A0A075B5T4 117 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv8-4A0A0A6YW26 117 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ighv1-74A0A0G2JGK2 117 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Gm28305F6U473 122 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Socs3O35718 225 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Ang2Q64438 145 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Odf3l1Q810P2 275 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Rnf185Q91YT2 192 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Wfdc15bQ9JHY4 80 aa12.03□□□□□ -0.48
Sdc1-205ENSMUST00000171158 Esp38A8R0X1 80 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Ndufa4l2Q4FZG9 87 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Vsig8Q6P3A4 417 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Hoxc12Q8K5B8 280 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Prss41Q920S2 322 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Sptbn4E9PX29 2561 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Ash1lQ99MY8 2958 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Med13lQ6JPI3 2207 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 PspnO70300 156 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 P01756 117 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 P01757 117 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 Spink2Q8BMY7 86 aa12.02□□□□□ -0.49
Sdc1-205ENSMUST00000171158 NpbQ8K4P1 119 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms