RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Olfr1243Q8VGM7 305 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ndufb3Q9CQZ6 104 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cysrt1Q9D1E4 142 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 4930412O13RikQ9D5M9 106 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Dkk2Q9QYZ8 259 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ube2l6Q9QZU9 153 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Trav7n-5A0A075B604 112 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gfra1P97785 468 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Znf575Q3TXZ1 239 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 QrfpQ8CE23 124 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Mcrip2Q9CQB2 160 aaKnown RBP10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Zfp292Q9Z2U2 2698 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Svep1A2AVA0 3567 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv1-55A0A075B5W6 117 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Tmem116A0A0G2JGD3 401 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Tmem141A2AJB2 108 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Omt2bD3YX29 119 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Onecut1O08755 465 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Sub1P11031 127 aaKnown RBP10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Tmem97Q8VD00 176 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 E030018B13RikJ3QMS9 113 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 S100a8P27005 89 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Rasl11aQ6IMB1 242 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Vmn1r63Q9EPT1 300 aa10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Slc25a20Q9Z2Z6 301 aaKnown RBP10.49□□□□□ -0.73
Nup88-201ENSMUST00000035283 Olfr235E9Q9Z6 312 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ccl6P27784 116 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Q3UNZ8 350 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 F930015N05RikQ8C3A3 210 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Stxbp6Q8R3T5 210 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Olfr1431Q8VF59 312 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ufc1Q9CR09 167 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv1-37A0A0A6YW32 117 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv1-20A0A0A6YX66 117 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Tmem95P0DJF3 176 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Znf239P24399 201 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 GaptQ8CB93 157 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Lypd8Q9D7S0 255 aa10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cnn3Q9DAW9 330 aaKnown RBP10.48□□□□□ -0.73
Nup88-201ENSMUST00000035283 Trav7-5A0A0G2JFX6 112 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ripply2Q2WG76 128 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm10192Q3V0S1 108 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cd52Q64389 74 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 A730015C16RikQ8C992 119 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv1-81A0A075B5Y4 117 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Bsph2Q0Q236 131 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Klk15Q8CGR4 254 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Olfr981Q8VEU2 310 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ube2tQ9CQ37 204 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ndufc2Q9CQ54 120 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Hspb8Q9JK92 196 aa10.47□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv14-2A0A075B5R7 117 aa10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Igsf23B2RTN2 239 aa10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ca2P00920 260 aaKnown RBP10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Olfr365Q8VFT2 312 aa10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Rnf185Q91YT2 192 aa10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Spcs1Q9D958 161 aa10.46□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm20481G3UXK4 153 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 CntfrO88507 372 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 P01756 117 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 P01757 117 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 NdpP48744 131 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 Rbfox3Q8BIF2 374 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 D630044L22RikQ8C701 164 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 Vmn1r62Q8R2C0 300 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 Q9D727 114 aa10.46□□□□□ -0.74
Nup88-201ENSMUST00000035283 Tstd1E9PY03 133 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm26602M0QWA4 95 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 SbpP15501 199 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Pde6hP61249 83 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Prok1Q14A28 105 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm5150Q1AN92 299 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Ssbp4Q3U4B1 363 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 YrdcQ3U5F4 280 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Vwc2lQ505H4 222 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Slc25a16Q8C0K5 332 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Slc16a4Q8R0M8 500 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm3285A0A1W2P7U0 201 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm10073E9Q3T0 114 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Fam240bJ3QMB3 78 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm9242J3QNY1 357 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Defa-rs7P50715 91 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Aqp6Q8C4A0 293 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 9130230L23RikQ8CC80 163 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 TdhQ8K3F7 373 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Mrpl33Q9CQP0 65 aa10.45□□□□□ -0.74
Nup88-201ENSMUST00000035283 Sertad4A7DTG3 377 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Tmem8bB1AWJ5 472 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm20517G3UVU6 152 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Bhlha15Q9QYC3 197 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 P01748 117 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 MycbQ6P8Z1 170 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gtf2h5Q8K2X8 71 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Olfr810Q8VFH9 312 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Mrpl16Q99N93 251 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Erg28Q9ERY9 140 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Dusp14Q9JLY7 198 aa10.44□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm33815A0A087WNV3 176 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm29644A0A087WPG2 191 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 H2al2bA9Z055 111 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 97.1 ms