RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Vmn1r216Q8R257 298 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Spata45Q9CVW4 97 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trdv2-1A0A0G2JGB9 116 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 P01649 108 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trdv2-2Q5R1A4 116 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Higd1cQ76I25 96 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Tpsg1Q9QUL7 311 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm5157A0A087WRH8 301 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Mtatp8P03930 67 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Ccsmst1Q6RUT7 136 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm7489Q3UT34 171 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Spint3Q3UW09 88 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trav6n-6A0A075B6B2 114 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm21983D6RFS9 131 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Col8a1Q00780 744 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm9733Q1AN91 178 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr211Q8VGH2 309 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Prr23a3Q9CWP9 254 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Tmem219Q9D123 240 aa12.8□□□□□ -0.36
Trim28-201ENSMUST00000005705 Smim13E9Q942 88 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 PgpQ8CHP8 321 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Chd9Q8BYH8 2885 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Cd24P24807 76 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Bsph2Q0Q236 131 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Mcrip2Q9CQB2 160 aaKnown RBP12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr1337A2ACY8 315 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm6871L7N248 545 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Fxyd7P59648 80 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Stpg2Q8C8J0 561 aa12.79□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm17359A0A0G2JEB7 487 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Sigmar1O55242 223 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gfra1P97785 468 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Tcrg-V6A0A075B5Y8 134 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Thy1P01831 162 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Errfi1Q99JZ7 461 aa12.78□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trav14d-1A0A075B6B1 121 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Esp38A8R0X1 80 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Insl3O09107 122 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 RbpjP31266 526 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Prr3Q811B5 190 aaKnown RBP12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Fam241bQ9D882 120 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Osr1Q9WVG7 266 aa12.77□□□□□ -0.36
Trim28-201ENSMUST00000005705 Bak1O08734 209 aa12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 FlncQ8VHX6 2726 aaKnown RBP12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm1968Q3T9I3 115 aa12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 Hoxc12Q8K5B8 280 aa12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ormdl3Q9CPZ6 153 aa12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 Rnf114Q9ET26 229 aa12.77□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv1-81A0A075B5Y4 117 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv1-69A0A0G2JFS5 117 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Snx22Q8C084 192 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ndfip1Q8R0W6 221 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ube2l6Q9QZU9 153 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Spsb3Q571F5 354 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Olfr1243Q8VGM7 305 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 Them7Q9DCP4 223 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 LrbaQ9ESE1 2856 aa12.76□□□□□ -0.37
Trim28-201ENSMUST00000005705 CampP51437 172 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Lce6aD3YV94 81 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 MtorQ9JLN9 2549 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Defa34D3Z0J0 93 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ssbp4Q3U4B1 363 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Josd1Q9DBJ6 202 aa12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ammecr1Q9JHT5 344 aaKnown RBP12.75□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm20481G3UXK4 153 aa12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 Mfge8P21956 463 aaKnown RBP12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 Zfp119aQ9JIC0 545 aa12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm15294V9GXA7 121 aa12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 Myo18bE9PV66 2605 aa12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 PpdpfQ9CR37 115 aa12.74□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv8-8A0A0A6YXQ0 119 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 NpsP0C0P8 89 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Spcs1Q9D958 161 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 KprpB2RUR4 657 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm16442D3YZG3 307 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Cd5P13379 494 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm4763Q8CFJ5 196 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv3-6P18531 116 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Slc35d2Q762D5 326 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Insig2Q91WG1 225 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Hrct1Q9D6B9 109 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Dkk2Q9QYZ8 259 aa12.73□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm94Q3V2D2 93 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Rbfox3Q8BIF2 374 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Mrpl20Q9CQL4 149 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Necap2Q9D1J1 266 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 CompQ9R0G6 755 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Utp20Q5XG71 2788 aaKnown RBP12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv9-4A0A0A6YWH6 117 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm45521A0A1B0GRK0 198 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 1700067P10RikG3X8U2 183 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 NdpP48744 131 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Gm5105Q8C6Y9 112 aa12.72□□□□□ -0.37
Trim28-201ENSMUST00000005705 Sox21Q811W0 276 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 Olfr1199Q8VF94 310 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 Tex48Q9DA81 110 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 Ighv8-4A0A0A6YW26 117 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 Cks1bP61025 79 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 F930015N05RikQ8C3A3 210 aa12.71□□□□□ -0.37
Trim28-201ENSMUST00000005705 IcosQ9WVS0 200 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms