Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm25239-201ENSMUST00000174915 86 ntBASIC31.08■■■□□ 2.57
Sox21Q811W0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Sox21Q811W0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sox21Q811W0 Gm15042-201ENSMUST00000120212 883 ntBASIC27.06■■□□□ 1.92
Sox21Q811W0 Gm24109-201ENSMUST00000175489 103 ntBASIC26.97■■□□□ 1.91
Sox21Q811W0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sox21Q811W0 Gm15045-201ENSMUST00000117359 883 ntBASIC26.49■■□□□ 1.83
Sox21Q811W0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox21Q811W0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sox21Q811W0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Sox21Q811W0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sox21Q811W0 Gm23366-201ENSMUST00000175022 89 ntBASIC25.87■■□□□ 1.73
Sox21Q811W0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sox21Q811W0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sox21Q811W0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sox21Q811W0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.22■■□□□ 1.63
Sox21Q811W0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sox21Q811W0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.06■■□□□ 1.6
Sox21Q811W0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25■■□□□ 1.59
Sox21Q811W0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sox21Q811W0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Sox21Q811W0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sox21Q811W0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Sox21Q811W0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sox21Q811W0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sox21Q811W0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sox21Q811W0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sox21Q811W0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sox21Q811W0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sox21Q811W0 Psd-208ENSMUST00000224556 2034 ntBASIC24.59■■□□□ 1.53
Sox21Q811W0 Gm25238-201ENSMUST00000174914 89 ntBASIC24.59■■□□□ 1.53
Sox21Q811W0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sox21Q811W0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox21Q811W0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sox21Q811W0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox21Q811W0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.44■■□□□ 1.5
Sox21Q811W0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.43■■□□□ 1.5
Sox21Q811W0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox21Q811W0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sox21Q811W0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.97■■□□□ 1.43
Sox21Q811W0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
Sox21Q811W0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sox21Q811W0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox21Q811W0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.86■■□□□ 1.41
Sox21Q811W0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Sox21Q811W0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox21Q811W0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox21Q811W0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox21Q811W0 Gm27325-201ENSMUST00000175467 74 ntBASIC23.7■■□□□ 1.38
Sox21Q811W0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.64■■□□□ 1.37
Sox21Q811W0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Sox21Q811W0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.57■■□□□ 1.36
Sox21Q811W0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox21Q811W0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox21Q811W0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.49■■□□□ 1.35
Sox21Q811W0 Gm25262-201ENSMUST00000174934 133 ntBASIC23.49■■□□□ 1.35
Sox21Q811W0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.45■■□□□ 1.34
Sox21Q811W0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sox21Q811W0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.36■■□□□ 1.33
Sox21Q811W0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sox21Q811W0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox21Q811W0 Rab21-202ENSMUST00000218831 843 ntBASIC23.27■■□□□ 1.32
Sox21Q811W0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.22■■□□□ 1.31
Sox21Q811W0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sox21Q811W0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sox21Q811W0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sox21Q811W0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sox21Q811W0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Sox21Q811W0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Sox21Q811W0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sox21Q811W0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sox21Q811W0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.1■■□□□ 1.29
Sox21Q811W0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Sox21Q811W0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sox21Q811W0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.05■■□□□ 1.28
Sox21Q811W0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sox21Q811W0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sox21Q811W0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.01■■□□□ 1.27
Sox21Q811W0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.01■■□□□ 1.27
Sox21Q811W0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox21Q811W0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox21Q811W0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Sox21Q811W0 Gm26115-201ENSMUST00000175605 87 ntBASIC22.92■■□□□ 1.26
Sox21Q811W0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sox21Q811W0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sox21Q811W0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sox21Q811W0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sox21Q811W0 Gm8109-201ENSMUST00000194076 746 ntBASIC22.87■■□□□ 1.25
Sox21Q811W0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sox21Q811W0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox21Q811W0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Sox21Q811W0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sox21Q811W0 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.83■■□□□ 1.24
Sox21Q811W0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sox21Q811W0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sox21Q811W0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sox21Q811W0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.76■■□□□ 1.23
Sox21Q811W0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.72■■□□□ 1.23
Sox21Q811W0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox21Q811W0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms