RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
PHGDH-220ENST00000641570 SPRR1BP22528 89 aa7.75□□□□□ -1.17
PHGDH-220ENST00000641570 Q8NBF4 154 aa7.75□□□□□ -1.17
PHGDH-220ENST00000641570 MOBPQ13875 183 aa7.74□□□□□ -1.17
PHGDH-220ENST00000641570 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
PHGDH-220ENST00000641570 Q8N377 158 aa7.73□□□□□ -1.17
PHGDH-220ENST00000641570 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
PHGDH-220ENST00000641570 HERC2O95714 4834 aa7.73□□□□□ -1.17
PHGDH-220ENST00000641570 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
PHGDH-220ENST00000641570 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
PHGDH-220ENST00000641570 ANKRD29Q8N6D5 301 aa7.72□□□□□ -1.17
PHGDH-220ENST00000641570 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
PHGDH-220ENST00000641570 H3BT86 120 aa7.71□□□□□ -1.18
PHGDH-220ENST00000641570 UBE2V1Q13404 147 aa7.71□□□□□ -1.18
PHGDH-220ENST00000641570 C3orf22Q8N5N4 141 aa7.71□□□□□ -1.18
PHGDH-220ENST00000641570 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
PHGDH-220ENST00000641570 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
PHGDH-220ENST00000641570 A0A1B0GV72 72 aa7.7□□□□□ -1.18
PHGDH-220ENST00000641570 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-220ENST00000641570 Q6JHZ5 121 aa7.7□□□□□ -1.18
PHGDH-220ENST00000641570 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
PHGDH-220ENST00000641570 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
PHGDH-220ENST00000641570 A0A087X002 238 aa7.69□□□□□ -1.18
PHGDH-220ENST00000641570 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
PHGDH-220ENST00000641570 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
PHGDH-220ENST00000641570 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
PHGDH-220ENST00000641570 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
PHGDH-220ENST00000641570 RBM3P98179 157 aaKnown RBP7.67□□□□□ -1.18
PHGDH-220ENST00000641570 MTURNQ8N3F0 131 aa7.67□□□□□ -1.18
PHGDH-220ENST00000641570 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
PHGDH-220ENST00000641570 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-220ENST00000641570 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
PHGDH-220ENST00000641570 SMIM29Q86T20 159 aa7.65□□□□□ -1.18
PHGDH-220ENST00000641570 F8W1H4 67 aa7.64□□□□□ -1.19
PHGDH-220ENST00000641570 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
PHGDH-220ENST00000641570 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
PHGDH-220ENST00000641570 A0A1B0GV90 55 aa7.63□□□□□ -1.19
PHGDH-220ENST00000641570 VPS25Q9BRG1 176 aa7.63□□□□□ -1.19
PHGDH-220ENST00000641570 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
PHGDH-220ENST00000641570 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
PHGDH-220ENST00000641570 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
PHGDH-220ENST00000641570 PDE6GP18545 87 aa7.61□□□□□ -1.19
PHGDH-220ENST00000641570 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
PHGDH-220ENST00000641570 SPINK1P00995 79 aa7.59□□□□□ -1.19
PHGDH-220ENST00000641570 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
PHGDH-220ENST00000641570 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.2
PHGDH-220ENST00000641570 CCKP06307 115 aa7.58□□□□□ -1.2
PHGDH-220ENST00000641570 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
PHGDH-220ENST00000641570 CD164Q04900 197 aa7.58□□□□□ -1.2
PHGDH-220ENST00000641570 TEN1Q86WV5 123 aa7.57□□□□□ -1.2
PHGDH-220ENST00000641570 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
PHGDH-220ENST00000641570 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
PHGDH-220ENST00000641570 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
PHGDH-220ENST00000641570 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
PHGDH-220ENST00000641570 PRO0461Q9UI25 63 aa7.54□□□□□ -1.2
PHGDH-220ENST00000641570 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
PHGDH-220ENST00000641570 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
PHGDH-220ENST00000641570 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
PHGDH-220ENST00000641570 A0A0G2JQZ4 141 aa7.52□□□□□ -1.21
PHGDH-220ENST00000641570 TRBV7-7A0A0K0K1E9 115 aa7.52□□□□□ -1.21
PHGDH-220ENST00000641570 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
PHGDH-220ENST00000641570 SMCPP49901 116 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-220ENST00000641570 ETDBQ3ZM63 59 aa7.52□□□□□ -1.21
PHGDH-220ENST00000641570 Q6Q795 121 aa7.51□□□□□ -1.21
PHGDH-220ENST00000641570 MYCBP2O75592 4640 aa7.51□□□□□ -1.21
PHGDH-220ENST00000641570 A0A087WSZ3 146 aa7.5□□□□□ -1.21
PHGDH-220ENST00000641570 Q6ZQT0 140 aa7.5□□□□□ -1.21
PHGDH-220ENST00000641570 OBSCN-AS1Q96MR7 158 aa7.5□□□□□ -1.21
PHGDH-220ENST00000641570 FAT3Q8TDW7 4589 aa7.5□□□□□ -1.21
PHGDH-220ENST00000641570 A0A1B0GW54 56 aa7.49□□□□□ -1.21
PHGDH-220ENST00000641570 A0A1W2PNM2 257 aa7.47□□□□□ -1.21
PHGDH-220ENST00000641570 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
PHGDH-220ENST00000641570 J3QR89 54 aa7.46□□□□□ -1.22
PHGDH-220ENST00000641570 PRR4Q16378 134 aa7.44□□□□□ -1.22
PHGDH-220ENST00000641570 NREPQ16612 68 aa7.43□□□□□ -1.22
PHGDH-220ENST00000641570 Q5XG85 94 aa7.43□□□□□ -1.22
PHGDH-220ENST00000641570 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
PHGDH-220ENST00000641570 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-220ENST00000641570 SIGMAR1Q99720 223 aa7.41□□□□□ -1.22
PHGDH-220ENST00000641570 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
PHGDH-220ENST00000641570 TNXBP22105 4242 aa7.41□□□□□ -1.22
PHGDH-220ENST00000641570 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
PHGDH-220ENST00000641570 FP248Q71RG6 208 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-220ENST00000641570 ACYP1P07311 99 aa7.39□□□□□ -1.23
PHGDH-220ENST00000641570 J3KT08 172 aa7.38□□□□□ -1.23
PHGDH-220ENST00000641570 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
PHGDH-220ENST00000641570 NDUFB1O75438 58 aa7.36□□□□□ -1.23
PHGDH-220ENST00000641570 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
PHGDH-220ENST00000641570 C1orf195Q5TG92 126 aa7.35□□□□□ -1.23
PHGDH-220ENST00000641570 FAM240AA0A1B0GVK7 77 aa7.34□□□□□ -1.23
PHGDH-220ENST00000641570 BPY2O14599 106 aa7.33□□□□□ -1.24
PHGDH-220ENST00000641570 K7ERU9 68 aa7.32□□□□□ -1.24
PHGDH-220ENST00000641570 DEFB116Q30KQ4 102 aa7.31□□□□□ -1.24
PHGDH-220ENST00000641570 Q6ZVQ6 151 aa7.31□□□□□ -1.24
PHGDH-220ENST00000641570 LINC00846Q9NV44 126 aa7.31□□□□□ -1.24
PHGDH-220ENST00000641570 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
PHGDH-220ENST00000641570 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.25
PHGDH-220ENST00000641570 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
PHGDH-220ENST00000641570 A8MWP4 228 aa7.25□□□□□ -1.25
PHGDH-220ENST00000641570 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms