RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 KRTAP1-4P0C5Y4 121 aa12.46□□□□□ -0.42
SCARB2-219ENST00000639738 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
SCARB2-219ENST00000639738 GAGE2AQ6NT46 116 aa12.44□□□□□ -0.42
SCARB2-219ENST00000639738 H3BT86 120 aa12.43□□□□□ -0.42
SCARB2-219ENST00000639738 ZNF706Q9Y5V0 76 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-219ENST00000639738 TMEM256-PLSCR3K7ERE1 68 aa12.42□□□□□ -0.42
SCARB2-219ENST00000639738 H3BQ85 93 aa12.42□□□□□ -0.42
SCARB2-219ENST00000639738 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
SCARB2-219ENST00000639738 ANAPC11Q9NYG5 84 aa12.42□□□□□ -0.42
SCARB2-219ENST00000639738 F8W1H4 67 aa12.41□□□□□ -0.42
SCARB2-219ENST00000639738 C3orf22Q8N5N4 141 aa12.4□□□□□ -0.42
SCARB2-219ENST00000639738 GHRHP01286 108 aa12.38□□□□□ -0.43
SCARB2-219ENST00000639738 NDUFV3P56181 108 aaKnown RBP12.37□□□□□ -0.43
SCARB2-219ENST00000639738 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-219ENST00000639738 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
SCARB2-219ENST00000639738 OBSCN-AS1Q96MR7 158 aa12.34□□□□□ -0.43
SCARB2-219ENST00000639738 A0A087X002 238 aa12.33□□□□□ -0.44
SCARB2-219ENST00000639738 HERC1Q15751 4861 aa12.32□□□□□ -0.44
SCARB2-219ENST00000639738 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
SCARB2-219ENST00000639738 FLG2Q5D862 2391 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-219ENST00000639738 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
SCARB2-219ENST00000639738 KRTAP13-2Q52LG2 175 aa12.31□□□□□ -0.44
SCARB2-219ENST00000639738 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
SCARB2-219ENST00000639738 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
SCARB2-219ENST00000639738 FAT3Q8TDW7 4589 aa12.29□□□□□ -0.44
SCARB2-219ENST00000639738 ETDBQ3ZM63 59 aa12.27□□□□□ -0.44
SCARB2-219ENST00000639738 TEN1Q86WV5 123 aa12.27□□□□□ -0.45
SCARB2-219ENST00000639738 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
SCARB2-219ENST00000639738 A0A1B0GV72 72 aa12.24□□□□□ -0.45
SCARB2-219ENST00000639738 JMJD7-PLA2G4BH0Y9G9 81 aa12.24□□□□□ -0.45
SCARB2-219ENST00000639738 CRYGAP11844 174 aa12.24□□□□□ -0.45
SCARB2-219ENST00000639738 TRBV7-4A0A0J9YYF1 115 aa12.23□□□□□ -0.45
SCARB2-219ENST00000639738 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
SCARB2-219ENST00000639738 PRR26Q8N8Z3 221 aa12.22□□□□□ -0.45
SCARB2-219ENST00000639738 F8WEM9 126 aa12.21□□□□□ -0.45
SCARB2-219ENST00000639738 MOBPQ13875 183 aa12.21□□□□□ -0.45
SCARB2-219ENST00000639738 A0A0G2JQZ4 141 aa12.21□□□□□ -0.46
SCARB2-219ENST00000639738 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
SCARB2-219ENST00000639738 Q8NBF4 154 aa12.2□□□□□ -0.46
SCARB2-219ENST00000639738 TNXBP22105 4242 aa12.19□□□□□ -0.46
SCARB2-219ENST00000639738 C14orf132Q9NPU4 83 aa12.19□□□□□ -0.46
SCARB2-219ENST00000639738 LOC110117498A0A087WWA1 95 aa12.18□□□□□ -0.46
SCARB2-219ENST00000639738 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
SCARB2-219ENST00000639738 SSBP3-AS1Q7Z2R9 100 aa12.18□□□□□ -0.46
SCARB2-219ENST00000639738 KRTAP10-8P60410 259 aa12.16□□□□□ -0.46
SCARB2-219ENST00000639738 Q6JHZ5 121 aa12.16□□□□□ -0.46
SCARB2-219ENST00000639738 Q6ZQT0 140 aa12.16□□□□□ -0.46
SCARB2-219ENST00000639738 A0A1W2PNM2 257 aa12.14□□□□□ -0.47
SCARB2-219ENST00000639738 DSCR8Q96T75 97 aa12.14□□□□□ -0.47
SCARB2-219ENST00000639738 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
SCARB2-219ENST00000639738 J3QL48 77 aa12.11□□□□□ -0.47
SCARB2-219ENST00000639738 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
SCARB2-219ENST00000639738 PDE6GP18545 87 aa12.1□□□□□ -0.47
SCARB2-219ENST00000639738 CCKP06307 115 aa12.09□□□□□ -0.47
SCARB2-219ENST00000639738 Q6Q795 121 aa12.08□□□□□ -0.48
SCARB2-219ENST00000639738 KRTAP29-1A8MX34 341 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-219ENST00000639738 OXTP01178 125 aa12.06□□□□□ -0.48
SCARB2-219ENST00000639738 CD164Q04900 197 aa12.04□□□□□ -0.48
SCARB2-219ENST00000639738 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
SCARB2-219ENST00000639738 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
SCARB2-219ENST00000639738 C21orf62-AS1Q17RA5 79 aa12□□□□□ -0.49
SCARB2-219ENST00000639738 LINC00304Q8N9R0 145 aa12□□□□□ -0.49
SCARB2-219ENST00000639738 VPS25Q9BRG1 176 aa12□□□□□ -0.49
SCARB2-219ENST00000639738 A0A1B0GW54 56 aa11.97□□□□□ -0.49
SCARB2-219ENST00000639738 SPAG11AQ6PDA7 123 aa11.96□□□□□ -0.5
SCARB2-219ENST00000639738 A0A087WSZ3 146 aa11.94□□□□□ -0.5
SCARB2-219ENST00000639738 SPINK1P00995 79 aa11.94□□□□□ -0.5
SCARB2-219ENST00000639738 Q5XG85 94 aa11.93□□□□□ -0.5
SCARB2-219ENST00000639738 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
SCARB2-219ENST00000639738 RPS29P62273 56 aaKnown RBP11.91□□□□□ -0.5
SCARB2-219ENST00000639738 LINC00846Q9NV44 126 aa11.91□□□□□ -0.5
SCARB2-219ENST00000639738 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
SCARB2-219ENST00000639738 ACYP1P07311 99 aa11.87□□□□□ -0.51
SCARB2-219ENST00000639738 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
SCARB2-219ENST00000639738 J3QR89 54 aa11.86□□□□□ -0.51
SCARB2-219ENST00000639738 Q96NJ1 140 aa11.85□□□□□ -0.51
SCARB2-219ENST00000639738 K7ERU9 68 aa11.83□□□□□ -0.52
SCARB2-219ENST00000639738 LINC00472Q9H8W2 130 aa11.83□□□□□ -0.52
SCARB2-219ENST00000639738 LIMD2Q9BT23 127 aa11.82□□□□□ -0.52
SCARB2-219ENST00000639738 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
SCARB2-219ENST00000639738 Q6ZVQ6 151 aa11.81□□□□□ -0.52
SCARB2-219ENST00000639738 C1orf195Q5TG92 126 aa11.79□□□□□ -0.52
SCARB2-219ENST00000639738 HMCN2Q8NDA2 5059 aa11.78□□□□□ -0.52
SCARB2-219ENST00000639738 NREPQ16612 68 aa11.78□□□□□ -0.52
SCARB2-219ENST00000639738 CDIP1Q9H305 208 aa11.78□□□□□ -0.52
SCARB2-219ENST00000639738 UBL5Q9BZL1 73 aa11.76□□□□□ -0.53
SCARB2-219ENST00000639738 DEFB116Q30KQ4 102 aa11.73□□□□□ -0.53
SCARB2-219ENST00000639738 RETNLBQ9BQ08 111 aa11.69□□□□□ -0.54
SCARB2-219ENST00000639738 DSCR10P59022 87 aa11.67□□□□□ -0.54
SCARB2-219ENST00000639738 LINC00643Q86TS7 51 aa11.66□□□□□ -0.54
SCARB2-219ENST00000639738 IGKV4-1P06312 121 aa11.65□□□□□ -0.55
SCARB2-219ENST00000639738 J3KT08 172 aa11.64□□□□□ -0.55
SCARB2-219ENST00000639738 BPY2O14599 106 aa11.64□□□□□ -0.55
SCARB2-219ENST00000639738 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
SCARB2-219ENST00000639738 UBR4Q5T4S7 5183 aa11.63□□□□□ -0.55
SCARB2-219ENST00000639738 CXCL6P80162 114 aa11.61□□□□□ -0.55
SCARB2-219ENST00000639738 IGKV3D-7A0A0C4DH55 119 aa11.59□□□□□ -0.55
SCARB2-219ENST00000639738 A8MWP4 228 aa11.58□□□□□ -0.56
SCARB2-219ENST00000639738 ATP5EP2Q5VTU8 51 aa11.58□□□□□ -0.56
SCARB2-219ENST00000639738 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms