RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 Q5VV11 94 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 CHCHD10Q8WYQ3 142 aaPredicted RBP4.04□□□□□ -1.76
RTTN-215ENST00000639487 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 DEFB1P60022 68 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 RNASE13Q5GAN3 156 aaKnown RBP4.04□□□□□ -1.76
RTTN-215ENST00000639487 FAM218AQ96MZ4 157 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
RTTN-215ENST00000639487 IGLV4-60A0A075B6I1 120 aa4.03□□□□□ -1.76
RTTN-215ENST00000639487 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
RTTN-215ENST00000639487 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
RTTN-215ENST00000639487 SPTAN1Q13813 2472 aaKnown RBP4.03□□□□□ -1.76
RTTN-215ENST00000639487 SCXQ7RTU7 201 aa4.02□□□□□ -1.77
RTTN-215ENST00000639487 SLPIP03973 132 aa4.02□□□□□ -1.77
RTTN-215ENST00000639487 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
RTTN-215ENST00000639487 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
RTTN-215ENST00000639487 COX7B2Q8TF08 81 aa4.01□□□□□ -1.77
RTTN-215ENST00000639487 SND1-IT1Q9HBX3 110 aa4.01□□□□□ -1.77
RTTN-215ENST00000639487 TRBV7-4A0A0J9YYF1 115 aa4.01□□□□□ -1.77
RTTN-215ENST00000639487 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
RTTN-215ENST00000639487 TNP2Q05952 138 aa4□□□□□ -1.77
RTTN-215ENST00000639487 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
RTTN-215ENST00000639487 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
RTTN-215ENST00000639487 NCR3O14931 201 aa4□□□□□ -1.77
RTTN-215ENST00000639487 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
RTTN-215ENST00000639487 TRBV10-3A0A0K0K1G6 114 aa3.99□□□□□ -1.77
RTTN-215ENST00000639487 IGKV3-7A0A075B6H7 116 aa3.99□□□□□ -1.77
RTTN-215ENST00000639487 C9orf116Q5BN46 136 aaPredicted RBP3.99□□□□□ -1.77
RTTN-215ENST00000639487 SPAG11AQ6PDA7 123 aa3.99□□□□□ -1.77
RTTN-215ENST00000639487 OBSCN-AS1Q96MR7 158 aa3.99□□□□□ -1.77
RTTN-215ENST00000639487 KIAA1109Q2LD37 5005 aa3.99□□□□□ -1.77
RTTN-215ENST00000639487 A6NED7 52 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 MOBPQ13875 183 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 FAM74A4Q5TZK3 123 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 CRPP02741 224 aa3.98□□□□□ -1.77
RTTN-215ENST00000639487 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
RTTN-215ENST00000639487 A0A087WYN8 130 aa3.97□□□□□ -1.77
RTTN-215ENST00000639487 PSCAO43653 123 aa3.97□□□□□ -1.77
RTTN-215ENST00000639487 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
RTTN-215ENST00000639487 PSORS1C2Q9UIG4 136 aa3.96□□□□□ -1.77
RTTN-215ENST00000639487 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
RTTN-215ENST00000639487 LCE2BO14633 110 aa3.96□□□□□ -1.78
RTTN-215ENST00000639487 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
RTTN-215ENST00000639487 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
RTTN-215ENST00000639487 REG3GQ6UW15 175 aa3.96□□□□□ -1.78
RTTN-215ENST00000639487 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 COX6A2Q02221 97 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 NREPQ16612 68 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 UBE2DNLQ8IWF7 75 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
RTTN-215ENST00000639487 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
RTTN-215ENST00000639487 TGP01266 2768 aa3.94□□□□□ -1.78
RTTN-215ENST00000639487 ERC2-IT1O76042 136 aa3.94□□□□□ -1.78
RTTN-215ENST00000639487 KRTAP10-2P60368 255 aa3.94□□□□□ -1.78
RTTN-215ENST00000639487 SSBP3-AS1Q7Z2R9 100 aa3.94□□□□□ -1.78
RTTN-215ENST00000639487 DHRS4-AS1Q9P1J3 65 aa3.94□□□□□ -1.78
RTTN-215ENST00000639487 ATRQ13535 2644 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 NBEAL1Q6ZS30 2694 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 MIR7-3HGQ8N6C7 128 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 LECT2O14960 151 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
RTTN-215ENST00000639487 LIMD2Q9BT23 127 aa3.92□□□□□ -1.78
RTTN-215ENST00000639487 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
RTTN-215ENST00000639487 IGLV7-43P04211 117 aa3.92□□□□□ -1.78
RTTN-215ENST00000639487 SPAG11BQ08648 103 aa3.92□□□□□ -1.78
RTTN-215ENST00000639487 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
RTTN-215ENST00000639487 IGHV3-73A0A0B4J1V6 119 aa3.92□□□□□ -1.78
RTTN-215ENST00000639487 IGKV2-29A2NJV5 120 aaPredicted RBP3.91□□□□□ -1.78
RTTN-215ENST00000639487 ZNF861PO60384 105 aa3.91□□□□□ -1.78
RTTN-215ENST00000639487 LINC01547P58512 204 aaPredicted RBP3.91□□□□□ -1.78
RTTN-215ENST00000639487 LINC00528Q8N1L1 170 aa3.91□□□□□ -1.78
RTTN-215ENST00000639487 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
RTTN-215ENST00000639487 NOTCH3Q9UM47 2321 aa3.9□□□□□ -1.78
RTTN-215ENST00000639487 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.78
RTTN-215ENST00000639487 TPRXLQ17RH7 258 aa3.9□□□□□ -1.78
RTTN-215ENST00000639487 CASC2Q6XLA1 102 aa3.9□□□□□ -1.78
RTTN-215ENST00000639487 Q8N3U1 123 aa3.9□□□□□ -1.78
RTTN-215ENST00000639487 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
RTTN-215ENST00000639487 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
RTTN-215ENST00000639487 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
RTTN-215ENST00000639487 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
RTTN-215ENST00000639487 ANGP03950 147 aaKnown RBP3.89□□□□□ -1.79
RTTN-215ENST00000639487 HAMPP81172 84 aa3.89□□□□□ -1.79
RTTN-215ENST00000639487 HIGD2AQ9BW72 106 aa3.89□□□□□ -1.79
RTTN-215ENST00000639487 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
RTTN-215ENST00000639487 A0A096LNI7 61 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 Q6ZRX8 168 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 IGKV2-28A0A075B6P5 120 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 IGKV2D-28P01615 120 aa3.88□□□□□ -1.79
RTTN-215ENST00000639487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms