RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
CACNA1A-227ENST00000636549 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
CACNA1A-227ENST00000636549 MGAM2Q2M2H8 2515 aa10.65□□□□□ -0.7
CACNA1A-227ENST00000636549 ROMO1P60602 79 aa10.63□□□□□ -0.71
CACNA1A-227ENST00000636549 PCNTO95613 3336 aa10.61□□□□□ -0.71
CACNA1A-227ENST00000636549 Q75L30 129 aa10.61□□□□□ -0.71
CACNA1A-227ENST00000636549 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-227ENST00000636549 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
CACNA1A-227ENST00000636549 PANO1I0J062 215 aa10.56□□□□□ -0.72
CACNA1A-227ENST00000636549 OXTP01178 125 aa10.55□□□□□ -0.72
CACNA1A-227ENST00000636549 PRRC2CQ9Y520 2896 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-227ENST00000636549 Q6ZR54 194 aa10.5□□□□□ -0.73
CACNA1A-227ENST00000636549 A0A087X002 238 aa10.5□□□□□ -0.73
CACNA1A-227ENST00000636549 LINC01558Q9Y6Z2 57 aa10.49□□□□□ -0.73
CACNA1A-227ENST00000636549 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
CACNA1A-227ENST00000636549 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
CACNA1A-227ENST00000636549 Q5VV11 94 aa10.46□□□□□ -0.74
CACNA1A-227ENST00000636549 A0A1B0GVY2 172 aa10.45□□□□□ -0.74
CACNA1A-227ENST00000636549 FLG2Q5D862 2391 aaPredicted RBP10.45□□□□□ -0.74
CACNA1A-227ENST00000636549 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
CACNA1A-227ENST00000636549 A8MU10 97 aa10.43□□□□□ -0.74
CACNA1A-227ENST00000636549 LINC00472Q9H8W2 130 aa10.43□□□□□ -0.74
CACNA1A-227ENST00000636549 EPG5Q9HCE0 2579 aa10.43□□□□□ -0.74
CACNA1A-227ENST00000636549 A8MUU9 505 aa10.41□□□□□ -0.74
CACNA1A-227ENST00000636549 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-227ENST00000636549 Q5XG85 94 aa10.38□□□□□ -0.75
CACNA1A-227ENST00000636549 ITPR3Q14573 2671 aa10.34□□□□□ -0.75
CACNA1A-227ENST00000636549 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
CACNA1A-227ENST00000636549 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-227ENST00000636549 CFAP54Q96N23 3096 aa10.33□□□□□ -0.76
CACNA1A-227ENST00000636549 SPRR1BP22528 89 aa10.31□□□□□ -0.76
CACNA1A-227ENST00000636549 SPRR1AP35321 89 aa10.3□□□□□ -0.76
CACNA1A-227ENST00000636549 C10orf95Q9H7T3 257 aa10.3□□□□□ -0.76
CACNA1A-227ENST00000636549 ATRQ13535 2644 aa10.28□□□□□ -0.76
CACNA1A-227ENST00000636549 CELSR3Q9NYQ7 3312 aa10.26□□□□□ -0.77
CACNA1A-227ENST00000636549 A0A0C4DFX4 3053 aa10.18□□□□□ -0.78
CACNA1A-227ENST00000636549 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
CACNA1A-227ENST00000636549 CFAP46Q8IYW2 2715 aa10.16□□□□□ -0.78
CACNA1A-227ENST00000636549 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
CACNA1A-227ENST00000636549 BRCA2P51587 3418 aa10.16□□□□□ -0.78
CACNA1A-227ENST00000636549 MAST4O15021 2626 aa10.16□□□□□ -0.78
CACNA1A-227ENST00000636549 HELZ2Q9BYK8 2649 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-227ENST00000636549 FREM2Q5SZK8 3169 aa10.14□□□□□ -0.79
CACNA1A-227ENST00000636549 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CACNA1A-227ENST00000636549 LAMA3Q16787 3333 aa10.11□□□□□ -0.79
CACNA1A-227ENST00000636549 CHD7Q9P2D1 2997 aa10.08□□□□□ -0.8
CACNA1A-227ENST00000636549 TRIOO75962 3097 aa10.06□□□□□ -0.8
CACNA1A-227ENST00000636549 LAMA2P24043 3122 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-227ENST00000636549 PRUNE2Q8WUY3 3088 aa10.02□□□□□ -0.8
CACNA1A-227ENST00000636549 DNAH14Q0VDD8 3507 aa10.02□□□□□ -0.81
CACNA1A-227ENST00000636549 TNP1P09430 55 aa10.01□□□□□ -0.81
CACNA1A-227ENST00000636549 TEX15Q9BXT5 2789 aa10.01□□□□□ -0.81
CACNA1A-227ENST00000636549 NDUFAF8A1L188 74 aa10□□□□□ -0.81
CACNA1A-227ENST00000636549 SZT2Q5T011 3432 aa10□□□□□ -0.81
CACNA1A-227ENST00000636549 UNC80Q8N2C7 3258 aa9.99□□□□□ -0.81
CACNA1A-227ENST00000636549 AKAP13Q12802 2813 aa9.99□□□□□ -0.81
CACNA1A-227ENST00000636549 MGAQ8IWI9 3026 aa9.98□□□□□ -0.81
CACNA1A-227ENST00000636549 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
CACNA1A-227ENST00000636549 KRTAP13-2Q52LG2 175 aa9.93□□□□□ -0.82
CACNA1A-227ENST00000636549 CDH23Q9H251 3354 aa9.92□□□□□ -0.82
CACNA1A-227ENST00000636549 REV3LO60673 3130 aa9.92□□□□□ -0.82
CACNA1A-227ENST00000636549 KRTAP25-1Q3LHN0 102 aa9.9□□□□□ -0.82
CACNA1A-227ENST00000636549 RANBP2P49792 3224 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-227ENST00000636549 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
CACNA1A-227ENST00000636549 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
CACNA1A-227ENST00000636549 WDFY4Q6ZS81 3184 aa9.88□□□□□ -0.83
CACNA1A-227ENST00000636549 TEP1Q99973 2627 aaKnown RBP9.88□□□□□ -0.83
CACNA1A-227ENST00000636549 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
CACNA1A-227ENST00000636549 HTTP42858 3142 aa9.87□□□□□ -0.83
CACNA1A-227ENST00000636549 CRYBG3Q68DQ2 2970 aa9.87□□□□□ -0.83
CACNA1A-227ENST00000636549 NBEAL1Q6ZS30 2694 aa9.86□□□□□ -0.83
CACNA1A-227ENST00000636549 KRTAP4-16G5E9R7 235 aaPredicted RBP9.85□□□□□ -0.83
CACNA1A-227ENST00000636549 COL6A3P12111 3177 aa9.83□□□□□ -0.84
CACNA1A-227ENST00000636549 FRYQ5TBA9 3013 aa9.82□□□□□ -0.84
CACNA1A-227ENST00000636549 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
CACNA1A-227ENST00000636549 Q6ZRN7 208 aaPredicted RBP9.77□□□□□ -0.85
CACNA1A-227ENST00000636549 CENPEQ02224 2701 aa9.76□□□□□ -0.85
CACNA1A-227ENST00000636549 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
CACNA1A-227ENST00000636549 SETXQ7Z333 2677 aaKnown RBP9.74□□□□□ -0.85
CACNA1A-227ENST00000636549 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
CACNA1A-227ENST00000636549 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
CACNA1A-227ENST00000636549 P0C880 135 aa9.7□□□□□ -0.86
CACNA1A-227ENST00000636549 SPEGQ15772 3267 aa9.68□□□□□ -0.86
CACNA1A-227ENST00000636549 BAHCC1Q9P281 2608 aa9.66□□□□□ -0.86
CACNA1A-227ENST00000636549 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
CACNA1A-227ENST00000636549 COL6A5A8TX70 2615 aa9.64□□□□□ -0.87
CACNA1A-227ENST00000636549 VCANP13611 3396 aa9.63□□□□□ -0.87
CACNA1A-227ENST00000636549 NBEAL2Q6ZNJ1 2754 aa9.59□□□□□ -0.87
CACNA1A-227ENST00000636549 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
CACNA1A-227ENST00000636549 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
CACNA1A-227ENST00000636549 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
CACNA1A-227ENST00000636549 STAB2Q8WWQ8 2551 aa9.57□□□□□ -0.88
CACNA1A-227ENST00000636549 XP32Q5T750 250 aa9.56□□□□□ -0.88
CACNA1A-227ENST00000636549 A6NN06 94 aa9.55□□□□□ -0.88
CACNA1A-227ENST00000636549 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
CACNA1A-227ENST00000636549 PRO2289Q9P1D8 64 aa9.44□□□□□ -0.9
CACNA1A-227ENST00000636549 KALRNO60229 2985 aa9.43□□□□□ -0.9
CACNA1A-227ENST00000636549 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
CACNA1A-227ENST00000636549 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
CACNA1A-227ENST00000636549 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms