RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 FLNAP21333 2647 aaKnown RBP9.63□□□□□ -0.87
CLN5-208ENST00000636183 OCR1Q9BZK8 76 aa9.63□□□□□ -0.87
CLN5-208ENST00000636183 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
CLN5-208ENST00000636183 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
CLN5-208ENST00000636183 FP248Q71RG6 208 aaPredicted RBP9.6□□□□□ -0.87
CLN5-208ENST00000636183 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
CLN5-208ENST00000636183 Q8NDZ9 215 aa9.54□□□□□ -0.88
CLN5-208ENST00000636183 CEP350Q5VT06 3117 aa9.52□□□□□ -0.89
CLN5-208ENST00000636183 SPRR1AP35321 89 aa9.51□□□□□ -0.89
CLN5-208ENST00000636183 RPL37P61927 97 aaKnown RBP9.5□□□□□ -0.89
CLN5-208ENST00000636183 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
CLN5-208ENST00000636183 PANO1I0J062 215 aa9.47□□□□□ -0.89
CLN5-208ENST00000636183 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.89
CLN5-208ENST00000636183 Q75L30 129 aa9.46□□□□□ -0.9
CLN5-208ENST00000636183 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CLN5-208ENST00000636183 PRRC2CQ9Y520 2896 aaKnown RBP9.45□□□□□ -0.9
CLN5-208ENST00000636183 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
CLN5-208ENST00000636183 A0A087X002 238 aa9.44□□□□□ -0.9
CLN5-208ENST00000636183 SPRR1BP22528 89 aa9.43□□□□□ -0.9
CLN5-208ENST00000636183 C5orf42Q9H799 3197 aa9.43□□□□□ -0.9
CLN5-208ENST00000636183 KRTAP26-1Q6PEX3 210 aa9.42□□□□□ -0.9
CLN5-208ENST00000636183 Q6ZR54 194 aa9.42□□□□□ -0.9
CLN5-208ENST00000636183 LINC01558Q9Y6Z2 57 aa9.42□□□□□ -0.9
CLN5-208ENST00000636183 ROMO1P60602 79 aa9.42□□□□□ -0.9
CLN5-208ENST00000636183 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.9
CLN5-208ENST00000636183 TEX15Q9BXT5 2789 aa9.37□□□□□ -0.91
CLN5-208ENST00000636183 A8MUU9 505 aa9.34□□□□□ -0.91
CLN5-208ENST00000636183 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
CLN5-208ENST00000636183 UTRNP46939 3433 aa9.33□□□□□ -0.92
CLN5-208ENST00000636183 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
CLN5-208ENST00000636183 BAHCC1Q9P281 2608 aa9.31□□□□□ -0.92
CLN5-208ENST00000636183 NBEAL1Q6ZS30 2694 aa9.29□□□□□ -0.92
CLN5-208ENST00000636183 AKAP13Q12802 2813 aa9.27□□□□□ -0.92
CLN5-208ENST00000636183 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
CLN5-208ENST00000636183 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
CLN5-208ENST00000636183 Q5VV11 94 aa9.2□□□□□ -0.94
CLN5-208ENST00000636183 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.95
CLN5-208ENST00000636183 CHD6Q8TD26 2715 aa9.15□□□□□ -0.95
CLN5-208ENST00000636183 UNC79Q9P2D8 2635 aa9.14□□□□□ -0.95
CLN5-208ENST00000636183 CENPEQ02224 2701 aa9.13□□□□□ -0.95
CLN5-208ENST00000636183 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
CLN5-208ENST00000636183 COL6A5A8TX70 2615 aa9.09□□□□□ -0.95
CLN5-208ENST00000636183 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
CLN5-208ENST00000636183 A8MU10 97 aa9.06□□□□□ -0.96
CLN5-208ENST00000636183 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
CLN5-208ENST00000636183 TNP1P09430 55 aa9.05□□□□□ -0.96
CLN5-208ENST00000636183 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
CLN5-208ENST00000636183 RPS29P62273 56 aaKnown RBP9.05□□□□□ -0.96
CLN5-208ENST00000636183 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
CLN5-208ENST00000636183 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
CLN5-208ENST00000636183 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
CLN5-208ENST00000636183 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
CLN5-208ENST00000636183 H3BS24 57 aa9□□□□□ -0.97
CLN5-208ENST00000636183 C10orf95Q9H7T3 257 aa8.98□□□□□ -0.97
CLN5-208ENST00000636183 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
CLN5-208ENST00000636183 Q5XG85 94 aa8.94□□□□□ -0.98
CLN5-208ENST00000636183 A0A0C4DFX4 3053 aa8.91□□□□□ -0.98
CLN5-208ENST00000636183 ASB16-AS1Q495Z4 193 aa8.9□□□□□ -0.98
CLN5-208ENST00000636183 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
CLN5-208ENST00000636183 FRYQ5TBA9 3013 aa8.87□□□□□ -0.99
CLN5-208ENST00000636183 CFAP54Q96N23 3096 aa8.86□□□□□ -0.99
CLN5-208ENST00000636183 MGAQ8IWI9 3026 aa8.86□□□□□ -0.99
CLN5-208ENST00000636183 PCNTO95613 3336 aa8.86□□□□□ -0.99
CLN5-208ENST00000636183 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
CLN5-208ENST00000636183 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
CLN5-208ENST00000636183 IGSF10Q6WRI0 2623 aa8.8□□□□□ -1
CLN5-208ENST00000636183 KMT2BQ9UMN6 2715 aaPredicted RBP8.79□□□□□ -1
CLN5-208ENST00000636183 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
CLN5-208ENST00000636183 REV3LO60673 3130 aa8.77□□□□□ -1.01
CLN5-208ENST00000636183 GCN1Q92616 2671 aaKnown RBP8.74□□□□□ -1.01
CLN5-208ENST00000636183 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
CLN5-208ENST00000636183 ITPR2Q14571 2701 aa8.72□□□□□ -1.01
CLN5-208ENST00000636183 ZNF292O60281 2723 aa8.71□□□□□ -1.01
CLN5-208ENST00000636183 KRTAP25-1Q3LHN0 102 aa8.7□□□□□ -1.02
CLN5-208ENST00000636183 XP32Q5T750 250 aa8.7□□□□□ -1.02
CLN5-208ENST00000636183 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
CLN5-208ENST00000636183 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
CLN5-208ENST00000636183 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
CLN5-208ENST00000636183 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
CLN5-208ENST00000636183 P0C880 135 aa8.65□□□□□ -1.02
CLN5-208ENST00000636183 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
CLN5-208ENST00000636183 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
CLN5-208ENST00000636183 LAMA3Q16787 3333 aa8.61□□□□□ -1.03
CLN5-208ENST00000636183 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
CLN5-208ENST00000636183 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
CLN5-208ENST00000636183 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
CLN5-208ENST00000636183 RANBP2P49792 3224 aaKnown RBP8.57□□□□□ -1.04
CLN5-208ENST00000636183 MAP1AP78559 2803 aaPredicted RBP8.56□□□□□ -1.04
CLN5-208ENST00000636183 XIRP2A4UGR9 3374 aa8.56□□□□□ -1.04
CLN5-208ENST00000636183 TRIOO75962 3097 aa8.55□□□□□ -1.04
CLN5-208ENST00000636183 LAMA2P24043 3122 aaKnown RBP8.54□□□□□ -1.04
CLN5-208ENST00000636183 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
CLN5-208ENST00000636183 DSPP15924 2871 aaKnown RBP8.52□□□□□ -1.05
CLN5-208ENST00000636183 BRCA2P51587 3418 aa8.51□□□□□ -1.05
CLN5-208ENST00000636183 UNC80Q8N2C7 3258 aa8.47□□□□□ -1.05
CLN5-208ENST00000636183 CHD9Q3L8U1 2897 aa8.46□□□□□ -1.05
CLN5-208ENST00000636183 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
CLN5-208ENST00000636183 FREM2Q5SZK8 3169 aa8.44□□□□□ -1.06
CLN5-208ENST00000636183 CELSR3Q9NYQ7 3312 aa8.44□□□□□ -1.06
CLN5-208ENST00000636183 TENM4Q6N022 2769 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms