RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
CNOT1-223ENST00000628857 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 PRLHP81277 87 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 DEFB103AP81534 67 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 DEFB109BQ30KR1 87 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 KRTAP13-4Q3LI77 160 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 CLPSL2Q6UWE3 100 aa1.24□□□□□ -2.21
CNOT1-223ENST00000628857 K7EIL1 84 aa1.23□□□□□ -2.21
CNOT1-223ENST00000628857 CACNA1GO43497 2377 aa1.22□□□□□ -2.21
CNOT1-223ENST00000628857 JMJD1CQ15652 2540 aa1.22□□□□□ -2.21
CNOT1-223ENST00000628857 SPRR1AP35321 89 aa1.22□□□□□ -2.21
CNOT1-223ENST00000628857 PCNX1Q96RV3 2341 aa1.22□□□□□ -2.21
CNOT1-223ENST00000628857 ROS1P08922 2347 aa1.2□□□□□ -2.22
CNOT1-223ENST00000628857 Q5VSD8 79 aa1.2□□□□□ -2.22
CNOT1-223ENST00000628857 A0A0C4DFX4 3053 aa1.19□□□□□ -2.22
CNOT1-223ENST00000628857 STATHP02808 62 aa1.19□□□□□ -2.22
CNOT1-223ENST00000628857 BAHCC1Q9P281 2608 aa1.19□□□□□ -2.22
CNOT1-223ENST00000628857 S4R3F8 94 aa1.19□□□□□ -2.22
CNOT1-223ENST00000628857 ZNF462Q96JM2 2506 aa1.19□□□□□ -2.22
CNOT1-223ENST00000628857 CSPG4Q6UVK1 2322 aa1.18□□□□□ -2.22
CNOT1-223ENST00000628857 SPINK1P00995 79 aa1.18□□□□□ -2.22
CNOT1-223ENST00000628857 NOP10Q9NPE3 64 aaKnown RBP1.18□□□□□ -2.22
CNOT1-223ENST00000628857 SPTBN2O15020 2390 aa1.17□□□□□ -2.22
CNOT1-223ENST00000628857 APELAP0DMC3 54 aa1.17□□□□□ -2.22
CNOT1-223ENST00000628857 SPRR1BP22528 89 aa1.17□□□□□ -2.22
CNOT1-223ENST00000628857 KLK9Q2XQG4 91 aa1.17□□□□□ -2.22
CNOT1-223ENST00000628857 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
CNOT1-223ENST00000628857 REV3LO60673 3130 aa1.16□□□□□ -2.22
CNOT1-223ENST00000628857 H0YGG7 62 aa1.15□□□□□ -2.23
CNOT1-223ENST00000628857 J3QKU1 62 aa1.15□□□□□ -2.23
CNOT1-223ENST00000628857 MUC6Q6W4X9 2439 aa1.15□□□□□ -2.23
CNOT1-223ENST00000628857 C2CD3Q4AC94 2353 aa1.14□□□□□ -2.23
CNOT1-223ENST00000628857 MGAQ8IWI9 3026 aa1.14□□□□□ -2.23
CNOT1-223ENST00000628857 A0A0D9SG42 100 aa1.14□□□□□ -2.23
CNOT1-223ENST00000628857 CHD7Q9P2D1 2997 aa1.14□□□□□ -2.23
CNOT1-223ENST00000628857 SPTBN1Q01082 2364 aaKnown RBP1.14□□□□□ -2.23
CNOT1-223ENST00000628857 WNK1Q9H4A3 2382 aa1.14□□□□□ -2.23
CNOT1-223ENST00000628857 KRTAP12-1P59990 96 aa1.13□□□□□ -2.23
CNOT1-223ENST00000628857 DEFB119Q8N690 84 aa1.13□□□□□ -2.23
CNOT1-223ENST00000628857 ACACAQ13085 2346 aa1.13□□□□□ -2.23
CNOT1-223ENST00000628857 DSPP15924 2871 aaKnown RBP1.12□□□□□ -2.23
CNOT1-223ENST00000628857 COX14Q96I36 57 aa1.12□□□□□ -2.23
CNOT1-223ENST00000628857 CRCT1Q9UGL9 99 aa1.12□□□□□ -2.23
CNOT1-223ENST00000628857 SPTA1P02549 2419 aa1.11□□□□□ -2.23
CNOT1-223ENST00000628857 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
CNOT1-223ENST00000628857 DEFB1P60022 68 aa1.1□□□□□ -2.23
CNOT1-223ENST00000628857 KRTAP21-3Q3LHN1 58 aa1.1□□□□□ -2.23
CNOT1-223ENST00000628857 F8P00451 2351 aa1.1□□□□□ -2.23
CNOT1-223ENST00000628857 H3BUX3 64 aa1.09□□□□□ -2.23
CNOT1-223ENST00000628857 HTN1P15515 57 aa1.09□□□□□ -2.23
CNOT1-223ENST00000628857 RHPN1-AS1Q9BWJ2 59 aa1.09□□□□□ -2.23
CNOT1-223ENST00000628857 TRANK1O15050 2925 aa1.08□□□□□ -2.24
CNOT1-223ENST00000628857 TENM2Q9NT68 2774 aa1.08□□□□□ -2.24
CNOT1-223ENST00000628857 SPTBN4Q9H254 2564 aa1.07□□□□□ -2.24
CNOT1-223ENST00000628857 CEP290O15078 2479 aa1.07□□□□□ -2.24
CNOT1-223ENST00000628857 PRRC2CQ9Y520 2896 aaKnown RBP1.07□□□□□ -2.24
CNOT1-223ENST00000628857 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
CNOT1-223ENST00000628857 ABCA12Q86UK0 2595 aa1.06□□□□□ -2.24
CNOT1-223ENST00000628857 CELSR2Q9HCU4 2923 aa1.06□□□□□ -2.24
CNOT1-223ENST00000628857 CACNA1HO95180 2353 aa1.06□□□□□ -2.24
CNOT1-223ENST00000628857 OTOGQ6ZRI0 2925 aa1.05□□□□□ -2.24
CNOT1-223ENST00000628857 M0QZ58 72 aa1.05□□□□□ -2.24
CNOT1-223ENST00000628857 DEFB110Q30KQ9 67 aa1.05□□□□□ -2.24
CNOT1-223ENST00000628857 UBR5O95071 2799 aaPredicted RBP1.05□□□□□ -2.24
CNOT1-223ENST00000628857 GVINP1Q7Z2Y8 2422 aa1.05□□□□□ -2.24
CNOT1-223ENST00000628857 WDR87Q6ZQQ6 2873 aa1.04□□□□□ -2.24
CNOT1-223ENST00000628857 COL6A3P12111 3177 aa1.04□□□□□ -2.24
CNOT1-223ENST00000628857 DEFB108BQ8NET1 73 aa1.04□□□□□ -2.24
CNOT1-223ENST00000628857 CCDC168Q8NDH2 2452 aa1.04□□□□□ -2.24
CNOT1-223ENST00000628857 COL6A5A8TX70 2615 aa1.03□□□□□ -2.24
CNOT1-223ENST00000628857 SRRM2Q9UQ35 2752 aaKnown RBP1.03□□□□□ -2.24
CNOT1-223ENST00000628857 DEFB136Q30KP8 78 aa1.03□□□□□ -2.24
CNOT1-223ENST00000628857 ZNF292O60281 2723 aa1.03□□□□□ -2.24
CNOT1-223ENST00000628857 PKD1L2Q7Z442 2459 aa1.03□□□□□ -2.25
CNOT1-223ENST00000628857 EP300Q09472 2414 aaPredicted RBP1.02□□□□□ -2.25
CNOT1-223ENST00000628857 TTC28Q96AY4 2481 aa1.02□□□□□ -2.25
CNOT1-223ENST00000628857 KRTAP4-1Q9BYQ7 146 aa1.02□□□□□ -2.25
CNOT1-223ENST00000628857 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
CNOT1-223ENST00000628857 FBN3Q75N90 2809 aa1.02□□□□□ -2.25
CNOT1-223ENST00000628857 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
CNOT1-223ENST00000628857 CREBBPQ92793 2442 aa1.01□□□□□ -2.25
CNOT1-223ENST00000628857 CELSR1Q9NYQ6 3014 aa1.01□□□□□ -2.25
CNOT1-223ENST00000628857 VWFP04275 2813 aa1.01□□□□□ -2.25
CNOT1-223ENST00000628857 SPINK6Q6UWN8 80 aa1.01□□□□□ -2.25
CNOT1-223ENST00000628857 MEGF8Q7Z7M0 2845 aa1.01□□□□□ -2.25
CNOT1-223ENST00000628857 NAV2Q8IVL1 2488 aa1□□□□□ -2.25
CNOT1-223ENST00000628857 RANBP2P49792 3224 aaKnown RBP1□□□□□ -2.25
CNOT1-223ENST00000628857 A0A096LNI7 61 aa1□□□□□ -2.25
CNOT1-223ENST00000628857 RP1L1Q8IWN7 2480 aaPredicted RBP1□□□□□ -2.25
CNOT1-223ENST00000628857 AKAP13Q12802 2813 aa0.99□□□□□ -2.25
CNOT1-223ENST00000628857 NCOR1O75376 2440 aa0.99□□□□□ -2.25
CNOT1-223ENST00000628857 CRYBG3Q68DQ2 2970 aa0.98□□□□□ -2.25
CNOT1-223ENST00000628857 DEFB135Q30KP9 77 aa0.98□□□□□ -2.25
CNOT1-223ENST00000628857 CEP250Q9BV73 2442 aa0.98□□□□□ -2.25
CNOT1-223ENST00000628857 CHD6Q8TD26 2715 aa0.97□□□□□ -2.25
CNOT1-223ENST00000628857 NBASA2RRP1 2371 aa0.97□□□□□ -2.25
CNOT1-223ENST00000628857 APC2O95996 2303 aa0.97□□□□□ -2.25
CNOT1-223ENST00000628857 CEP350Q5VT06 3117 aa0.96□□□□□ -2.26
CNOT1-223ENST00000628857 DMBT1Q9UGM3 2413 aaPredicted RBP0.96□□□□□ -2.26
CNOT1-223ENST00000628857 POLQO75417 2590 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms