RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 Q8N377 158 aa7.91□□□□□ -1.14
MUC1-229ENST00000620770 SNHG12Q9BXW3 62 aa7.91□□□□□ -1.14
MUC1-229ENST00000620770 Q8NBF4 154 aa7.9□□□□□ -1.14
MUC1-229ENST00000620770 DNAL4O96015 105 aa7.89□□□□□ -1.15
MUC1-229ENST00000620770 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
MUC1-229ENST00000620770 A0A1B0GX51 115 aa7.88□□□□□ -1.15
MUC1-229ENST00000620770 H3BUT2 72 aa7.88□□□□□ -1.15
MUC1-229ENST00000620770 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
MUC1-229ENST00000620770 F8WEM9 126 aa7.86□□□□□ -1.15
MUC1-229ENST00000620770 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
MUC1-229ENST00000620770 LST1O00453 97 aa7.85□□□□□ -1.15
MUC1-229ENST00000620770 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
MUC1-229ENST00000620770 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 FABP2P12104 132 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 LYRM7Q5U5X0 104 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 ORMDL1Q9P0S3 153 aa7.84□□□□□ -1.15
MUC1-229ENST00000620770 TCL1BO95988 128 aa7.83□□□□□ -1.16
MUC1-229ENST00000620770 TRACP01848 142 aa7.83□□□□□ -1.16
MUC1-229ENST00000620770 LRP2P98164 4655 aa7.83□□□□□ -1.16
MUC1-229ENST00000620770 COL5A1-AS1Q5SY13 56 aa7.83□□□□□ -1.16
MUC1-229ENST00000620770 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
MUC1-229ENST00000620770 ATXN8Q156A1 80 aa7.82□□□□□ -1.16
MUC1-229ENST00000620770 A0A0G2JQZ4 141 aa7.81□□□□□ -1.16
MUC1-229ENST00000620770 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
MUC1-229ENST00000620770 A0A1B0GV72 72 aa7.8□□□□□ -1.16
MUC1-229ENST00000620770 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
MUC1-229ENST00000620770 GHRHP01286 108 aa7.8□□□□□ -1.16
MUC1-229ENST00000620770 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
MUC1-229ENST00000620770 NDUFV3P56181 108 aaKnown RBP7.79□□□□□ -1.16
MUC1-229ENST00000620770 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
MUC1-229ENST00000620770 H3BQ85 93 aa7.76□□□□□ -1.17
MUC1-229ENST00000620770 SPINK1P00995 79 aa7.76□□□□□ -1.17
MUC1-229ENST00000620770 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
MUC1-229ENST00000620770 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 H3BMG7 143 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 TMEM256-PLSCR3K7ERE1 68 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 SPCS1Q9Y6A9 102 aa7.75□□□□□ -1.17
MUC1-229ENST00000620770 C9JAW5 83 aa7.74□□□□□ -1.17
MUC1-229ENST00000620770 Q6JHZ5 121 aa7.74□□□□□ -1.17
MUC1-229ENST00000620770 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
MUC1-229ENST00000620770 PRR4Q16378 134 aa7.72□□□□□ -1.17
MUC1-229ENST00000620770 MTURNQ8N3F0 131 aa7.72□□□□□ -1.17
MUC1-229ENST00000620770 ANKRD29Q8N6D5 301 aa7.72□□□□□ -1.17
MUC1-229ENST00000620770 CD164Q04900 197 aa7.71□□□□□ -1.18
MUC1-229ENST00000620770 UBE2V1Q13404 147 aa7.71□□□□□ -1.18
MUC1-229ENST00000620770 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
MUC1-229ENST00000620770 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
MUC1-229ENST00000620770 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
MUC1-229ENST00000620770 K7EP34 96 aa7.66□□□□□ -1.18
MUC1-229ENST00000620770 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
MUC1-229ENST00000620770 LPAP08519 4548 aa7.64□□□□□ -1.19
MUC1-229ENST00000620770 H3BT86 120 aa7.64□□□□□ -1.19
MUC1-229ENST00000620770 DSCR8Q96T75 97 aa7.64□□□□□ -1.19
MUC1-229ENST00000620770 VPS25Q9BRG1 176 aa7.64□□□□□ -1.19
MUC1-229ENST00000620770 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
MUC1-229ENST00000620770 TEN1Q86WV5 123 aa7.63□□□□□ -1.19
MUC1-229ENST00000620770 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
MUC1-229ENST00000620770 CCKP06307 115 aa7.62□□□□□ -1.19
MUC1-229ENST00000620770 GTF2H5Q6ZYL4 71 aa7.62□□□□□ -1.19
MUC1-229ENST00000620770 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
MUC1-229ENST00000620770 JMJD7-PLA2G4BH0Y9G9 81 aa7.61□□□□□ -1.19
MUC1-229ENST00000620770 Q6Q795 121 aa7.61□□□□□ -1.19
MUC1-229ENST00000620770 A0A087WSZ3 146 aa7.6□□□□□ -1.19
MUC1-229ENST00000620770 FP248Q71RG6 208 aaPredicted RBP7.6□□□□□ -1.19
MUC1-229ENST00000620770 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
MUC1-229ENST00000620770 Q5XG85 94 aa7.59□□□□□ -1.19
MUC1-229ENST00000620770 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
MUC1-229ENST00000620770 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
MUC1-229ENST00000620770 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
MUC1-229ENST00000620770 PRO0461Q9UI25 63 aa7.57□□□□□ -1.2
MUC1-229ENST00000620770 Q6ZQT0 140 aa7.56□□□□□ -1.2
MUC1-229ENST00000620770 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
MUC1-229ENST00000620770 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
MUC1-229ENST00000620770 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
MUC1-229ENST00000620770 A0A1B0GV90 55 aa7.52□□□□□ -1.21
MUC1-229ENST00000620770 PDE6GP18545 87 aa7.52□□□□□ -1.21
MUC1-229ENST00000620770 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
MUC1-229ENST00000620770 F8W1H4 67 aa7.5□□□□□ -1.21
MUC1-229ENST00000620770 CDIP1Q9H305 208 aa7.5□□□□□ -1.21
MUC1-229ENST00000620770 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
MUC1-229ENST00000620770 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
MUC1-229ENST00000620770 Q96NJ1 140 aa7.48□□□□□ -1.21
MUC1-229ENST00000620770 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
MUC1-229ENST00000620770 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
MUC1-229ENST00000620770 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
MUC1-229ENST00000620770 ETDBQ3ZM63 59 aa7.46□□□□□ -1.22
MUC1-229ENST00000620770 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
MUC1-229ENST00000620770 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
MUC1-229ENST00000620770 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
MUC1-229ENST00000620770 A0A1B0GW54 56 aa7.42□□□□□ -1.22
MUC1-229ENST00000620770 MUC2Q02817 5179 aa7.41□□□□□ -1.22
MUC1-229ENST00000620770 NREPQ16612 68 aa7.4□□□□□ -1.22
MUC1-229ENST00000620770 XP32Q5T750 250 aa7.4□□□□□ -1.22
MUC1-229ENST00000620770 DSCR10P59022 87 aa7.37□□□□□ -1.23
MUC1-229ENST00000620770 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
MUC1-229ENST00000620770 J3KT08 172 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms