RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 COL6A5A8TX70 2615 aa9.63□□□□□ -0.87
COL5A1-208ENST00000618395 COL4A2P08572 1712 aa9.62□□□□□ -0.87
COL5A1-208ENST00000618395 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
COL5A1-208ENST00000618395 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
COL5A1-208ENST00000618395 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
COL5A1-208ENST00000618395 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
COL5A1-208ENST00000618395 UNC79Q9P2D8 2635 aa9.58□□□□□ -0.88
COL5A1-208ENST00000618395 CHD7Q9P2D1 2997 aa9.56□□□□□ -0.88
COL5A1-208ENST00000618395 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
COL5A1-208ENST00000618395 STAB1Q9NY15 2570 aa9.55□□□□□ -0.88
COL5A1-208ENST00000618395 A0A1W2PPR1 153 aa9.55□□□□□ -0.88
COL5A1-208ENST00000618395 J3QL48 77 aa9.55□□□□□ -0.88
COL5A1-208ENST00000618395 MGAQ8IWI9 3026 aa9.55□□□□□ -0.88
COL5A1-208ENST00000618395 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
COL5A1-208ENST00000618395 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
COL5A1-208ENST00000618395 HELZ2Q9BYK8 2649 aaKnown RBP9.52□□□□□ -0.89
COL5A1-208ENST00000618395 LAMA3Q16787 3333 aa9.52□□□□□ -0.89
COL5A1-208ENST00000618395 TNP2Q05952 138 aa9.52□□□□□ -0.89
COL5A1-208ENST00000618395 BRCA2P51587 3418 aa9.52□□□□□ -0.89
COL5A1-208ENST00000618395 KMT2BQ9UMN6 2715 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-208ENST00000618395 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
COL5A1-208ENST00000618395 UNC80Q8N2C7 3258 aa9.5□□□□□ -0.89
COL5A1-208ENST00000618395 APCP25054 2843 aa9.49□□□□□ -0.89
COL5A1-208ENST00000618395 A6NN06 94 aa9.48□□□□□ -0.89
COL5A1-208ENST00000618395 FRYLO94915 3013 aa9.48□□□□□ -0.89
COL5A1-208ENST00000618395 LAMA1P25391 3075 aa9.47□□□□□ -0.89
COL5A1-208ENST00000618395 NDUFAF8A1L188 74 aa9.46□□□□□ -0.89
COL5A1-208ENST00000618395 KALRNO60229 2985 aa9.46□□□□□ -0.89
COL5A1-208ENST00000618395 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
COL5A1-208ENST00000618395 A0A096LNT2 108 aa9.45□□□□□ -0.9
COL5A1-208ENST00000618395 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
COL5A1-208ENST00000618395 C10orf142B7Z368 130 aa9.45□□□□□ -0.9
COL5A1-208ENST00000618395 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
COL5A1-208ENST00000618395 CDH23Q9H251 3354 aa9.44□□□□□ -0.9
COL5A1-208ENST00000618395 WDFY4Q6ZS81 3184 aa9.43□□□□□ -0.9
COL5A1-208ENST00000618395 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-208ENST00000618395 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
COL5A1-208ENST00000618395 S4R3F8 94 aa9.41□□□□□ -0.9
COL5A1-208ENST00000618395 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
COL5A1-208ENST00000618395 H1FX-AS1Q4G0G2 97 aa9.39□□□□□ -0.91
COL5A1-208ENST00000618395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
COL5A1-208ENST00000618395 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
COL5A1-208ENST00000618395 Q5W150 140 aa9.37□□□□□ -0.91
COL5A1-208ENST00000618395 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
COL5A1-208ENST00000618395 UTP20O75691 2785 aaKnown RBP9.36□□□□□ -0.91
COL5A1-208ENST00000618395 ITPR1Q14643 2758 aa9.36□□□□□ -0.91
COL5A1-208ENST00000618395 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
COL5A1-208ENST00000618395 TACC2O95359 2948 aa9.35□□□□□ -0.91
COL5A1-208ENST00000618395 ZNF292O60281 2723 aa9.35□□□□□ -0.91
COL5A1-208ENST00000618395 HTTP42858 3142 aa9.34□□□□□ -0.91
COL5A1-208ENST00000618395 R4GN34 69 aa9.34□□□□□ -0.91
COL5A1-208ENST00000618395 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
COL5A1-208ENST00000618395 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
COL5A1-208ENST00000618395 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
COL5A1-208ENST00000618395 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
COL5A1-208ENST00000618395 LRBAP50851 2863 aa9.3□□□□□ -0.92
COL5A1-208ENST00000618395 NBEAL2Q6ZNJ1 2754 aa9.29□□□□□ -0.92
COL5A1-208ENST00000618395 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
COL5A1-208ENST00000618395 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
COL5A1-208ENST00000618395 PLAC4Q8WY50 150 aa9.28□□□□□ -0.92
COL5A1-208ENST00000618395 A0A087WTM6 91 aa9.28□□□□□ -0.92
COL5A1-208ENST00000618395 Q6ZSA8 131 aa9.26□□□□□ -0.93
COL5A1-208ENST00000618395 KRTAP24-1Q3LI83 254 aa9.26□□□□□ -0.93
COL5A1-208ENST00000618395 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
COL5A1-208ENST00000618395 Q6ZR54 194 aa9.24□□□□□ -0.93
COL5A1-208ENST00000618395 VCANP13611 3396 aa9.22□□□□□ -0.93
COL5A1-208ENST00000618395 COL6A3P12111 3177 aa9.21□□□□□ -0.94
COL5A1-208ENST00000618395 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
COL5A1-208ENST00000618395 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
COL5A1-208ENST00000618395 A0A087X002 238 aa9.18□□□□□ -0.94
COL5A1-208ENST00000618395 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
COL5A1-208ENST00000618395 USP34Q70CQ2 3546 aa9.17□□□□□ -0.94
COL5A1-208ENST00000618395 SETXQ7Z333 2677 aaKnown RBP9.17□□□□□ -0.94
COL5A1-208ENST00000618395 DMXL2Q8TDJ6 3036 aa9.14□□□□□ -0.95
COL5A1-208ENST00000618395 SMR3BP02814 79 aaPredicted RBP9.14□□□□□ -0.95
COL5A1-208ENST00000618395 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
COL5A1-208ENST00000618395 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
COL5A1-208ENST00000618395 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
COL5A1-208ENST00000618395 Q8NDZ9 215 aa9.13□□□□□ -0.95
COL5A1-208ENST00000618395 SPRR1AP35321 89 aa9.13□□□□□ -0.95
COL5A1-208ENST00000618395 KRTAP10-11P60412 298 aa9.13□□□□□ -0.95
COL5A1-208ENST00000618395 K7EIL1 84 aa9.11□□□□□ -0.95
COL5A1-208ENST00000618395 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
COL5A1-208ENST00000618395 M0QZ58 72 aa9.09□□□□□ -0.95
COL5A1-208ENST00000618395 UBR5O95071 2799 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-208ENST00000618395 ZZEF1O43149 2961 aa9.07□□□□□ -0.96
COL5A1-208ENST00000618395 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
COL5A1-208ENST00000618395 PANO1I0J062 215 aa9.05□□□□□ -0.96
COL5A1-208ENST00000618395 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
COL5A1-208ENST00000618395 CFAP47Q6ZTR5 3102 aa9.04□□□□□ -0.96
COL5A1-208ENST00000618395 WDFY3Q8IZQ1 3526 aa9.04□□□□□ -0.96
COL5A1-208ENST00000618395 M0R2T5 61 aa9.03□□□□□ -0.96
COL5A1-208ENST00000618395 SPRR1BP22528 89 aa9.03□□□□□ -0.96
COL5A1-208ENST00000618395 SPEGQ15772 3267 aa9.02□□□□□ -0.97
COL5A1-208ENST00000618395 SZT2Q5T011 3432 aa9.01□□□□□ -0.97
COL5A1-208ENST00000618395 A8MUU9 505 aa9.01□□□□□ -0.97
COL5A1-208ENST00000618395 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
COL5A1-208ENST00000618395 A8MU10 97 aa8.99□□□□□ -0.97
COL5A1-208ENST00000618395 LCE6AA0A183 80 aa8.94□□□□□ -0.98
COL5A1-208ENST00000618395 CRYBG3Q68DQ2 2970 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms