RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
CLTCL1-209ENST00000617103 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
CLTCL1-209ENST00000617103 CHD7Q9P2D1 2997 aa6.52□□□□□ -1.37
CLTCL1-209ENST00000617103 CFAP54Q96N23 3096 aa6.52□□□□□ -1.37
CLTCL1-209ENST00000617103 TNP2Q05952 138 aa6.51□□□□□ -1.37
CLTCL1-209ENST00000617103 ZCCHC13Q8WW36 166 aaKnown RBP6.51□□□□□ -1.37
CLTCL1-209ENST00000617103 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
CLTCL1-209ENST00000617103 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
CLTCL1-209ENST00000617103 NOTCH1P46531 2555 aa6.48□□□□□ -1.37
CLTCL1-209ENST00000617103 PCNTO95613 3336 aa6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 CFAP46Q8IYW2 2715 aa6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 J3QL48 77 aa6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 GCN1Q92616 2671 aaKnown RBP6.47□□□□□ -1.37
CLTCL1-209ENST00000617103 HELZ2Q9BYK8 2649 aaKnown RBP6.46□□□□□ -1.37
CLTCL1-209ENST00000617103 C5orf42Q9H799 3197 aa6.46□□□□□ -1.37
CLTCL1-209ENST00000617103 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
CLTCL1-209ENST00000617103 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
CLTCL1-209ENST00000617103 Q6ZR54 194 aa6.43□□□□□ -1.38
CLTCL1-209ENST00000617103 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
CLTCL1-209ENST00000617103 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
CLTCL1-209ENST00000617103 Q6ZSA8 131 aa6.4□□□□□ -1.38
CLTCL1-209ENST00000617103 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
CLTCL1-209ENST00000617103 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
CLTCL1-209ENST00000617103 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
CLTCL1-209ENST00000617103 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
CLTCL1-209ENST00000617103 TEX15Q9BXT5 2789 aa6.38□□□□□ -1.39
CLTCL1-209ENST00000617103 CHD9Q3L8U1 2897 aa6.38□□□□□ -1.39
CLTCL1-209ENST00000617103 ROMO1P60602 79 aa6.37□□□□□ -1.39
CLTCL1-209ENST00000617103 S4R3F8 94 aa6.36□□□□□ -1.39
CLTCL1-209ENST00000617103 MGAQ8IWI9 3026 aa6.36□□□□□ -1.39
CLTCL1-209ENST00000617103 KRTAP1-5Q9BYS1 174 aa6.35□□□□□ -1.39
CLTCL1-209ENST00000617103 COL6A5A8TX70 2615 aa6.35□□□□□ -1.39
CLTCL1-209ENST00000617103 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
CLTCL1-209ENST00000617103 NBEAL2Q6ZNJ1 2754 aa6.34□□□□□ -1.39
CLTCL1-209ENST00000617103 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
CLTCL1-209ENST00000617103 A6NN06 94 aa6.34□□□□□ -1.39
CLTCL1-209ENST00000617103 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
CLTCL1-209ENST00000617103 LCE6AA0A183 80 aa6.33□□□□□ -1.4
CLTCL1-209ENST00000617103 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
CLTCL1-209ENST00000617103 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
CLTCL1-209ENST00000617103 R4GN34 69 aa6.28□□□□□ -1.4
CLTCL1-209ENST00000617103 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
CLTCL1-209ENST00000617103 RANBP2P49792 3224 aaKnown RBP6.25□□□□□ -1.41
CLTCL1-209ENST00000617103 ZNF292O60281 2723 aa6.25□□□□□ -1.41
CLTCL1-209ENST00000617103 A0A087X002 238 aa6.23□□□□□ -1.41
CLTCL1-209ENST00000617103 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
CLTCL1-209ENST00000617103 TRANK1O15050 2925 aa6.23□□□□□ -1.41
CLTCL1-209ENST00000617103 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
CLTCL1-209ENST00000617103 HTTP42858 3142 aa6.22□□□□□ -1.41
CLTCL1-209ENST00000617103 PANO1I0J062 215 aa6.21□□□□□ -1.41
CLTCL1-209ENST00000617103 BAHCC1Q9P281 2608 aa6.21□□□□□ -1.41
CLTCL1-209ENST00000617103 SETXQ7Z333 2677 aaKnown RBP6.21□□□□□ -1.41
CLTCL1-209ENST00000617103 WDFY4Q6ZS81 3184 aa6.21□□□□□ -1.42
CLTCL1-209ENST00000617103 FRYQ5TBA9 3013 aa6.2□□□□□ -1.42
CLTCL1-209ENST00000617103 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
CLTCL1-209ENST00000617103 A8MU10 97 aa6.2□□□□□ -1.42
CLTCL1-209ENST00000617103 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
CLTCL1-209ENST00000617103 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
CLTCL1-209ENST00000617103 FREM2Q5SZK8 3169 aa6.16□□□□□ -1.42
CLTCL1-209ENST00000617103 M0QZ58 72 aa6.16□□□□□ -1.42
CLTCL1-209ENST00000617103 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
CLTCL1-209ENST00000617103 TRIOO75962 3097 aa6.15□□□□□ -1.42
CLTCL1-209ENST00000617103 ITPR1Q14643 2758 aa6.14□□□□□ -1.43
CLTCL1-209ENST00000617103 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
CLTCL1-209ENST00000617103 KRTAP11-1Q8IUC1 163 aa6.13□□□□□ -1.43
CLTCL1-209ENST00000617103 KRTAP10-2P60368 255 aa6.13□□□□□ -1.43
CLTCL1-209ENST00000617103 MKI67P46013 3256 aaKnown RBP6.11□□□□□ -1.43
CLTCL1-209ENST00000617103 DSPP15924 2871 aaKnown RBP6.11□□□□□ -1.43
CLTCL1-209ENST00000617103 NSD1Q96L73 2696 aaPredicted RBP6.11□□□□□ -1.43
CLTCL1-209ENST00000617103 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
CLTCL1-209ENST00000617103 M0R2T5 61 aa6.1□□□□□ -1.43
CLTCL1-209ENST00000617103 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
CLTCL1-209ENST00000617103 LAMA3Q16787 3333 aa6.09□□□□□ -1.43
CLTCL1-209ENST00000617103 KALRNO60229 2985 aa6.09□□□□□ -1.44
CLTCL1-209ENST00000617103 NBEAQ8NFP9 2946 aa6.07□□□□□ -1.44
CLTCL1-209ENST00000617103 KRTAP13-1Q8IUC0 172 aa6.05□□□□□ -1.44
CLTCL1-209ENST00000617103 PRUNE2Q8WUY3 3088 aa6.04□□□□□ -1.44
CLTCL1-209ENST00000617103 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
CLTCL1-209ENST00000617103 BRCA2P51587 3418 aa6.03□□□□□ -1.44
CLTCL1-209ENST00000617103 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
CLTCL1-209ENST00000617103 IGSF10Q6WRI0 2623 aa6.02□□□□□ -1.45
CLTCL1-209ENST00000617103 ASH1LQ9NR48 2969 aaKnown RBP6.01□□□□□ -1.45
CLTCL1-209ENST00000617103 Q5VSD8 79 aa6□□□□□ -1.45
CLTCL1-209ENST00000617103 APCP25054 2843 aa6□□□□□ -1.45
CLTCL1-209ENST00000617103 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
CLTCL1-209ENST00000617103 DMXL2Q8TDJ6 3036 aa5.99□□□□□ -1.45
CLTCL1-209ENST00000617103 XIRP2A4UGR9 3374 aa5.97□□□□□ -1.45
CLTCL1-209ENST00000617103 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
CLTCL1-209ENST00000617103 UNC80Q8N2C7 3258 aa5.97□□□□□ -1.45
CLTCL1-209ENST00000617103 ITPR2Q14571 2701 aa5.96□□□□□ -1.45
CLTCL1-209ENST00000617103 TACC2O95359 2948 aa5.96□□□□□ -1.46
CLTCL1-209ENST00000617103 A8MUU9 505 aa5.95□□□□□ -1.46
CLTCL1-209ENST00000617103 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
CLTCL1-209ENST00000617103 UTP20O75691 2785 aaKnown RBP5.93□□□□□ -1.46
CLTCL1-209ENST00000617103 FLNCQ14315 2725 aa5.92□□□□□ -1.46
CLTCL1-209ENST00000617103 CELSR3Q9NYQ7 3312 aa5.9□□□□□ -1.46
CLTCL1-209ENST00000617103 HIVEP1P15822 2718 aa5.9□□□□□ -1.47
CLTCL1-209ENST00000617103 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms