RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 IGLV5-48A0A075B6I7 105 aa11.34□□□□□ -0.59
ATXN2-227ENST00000616825 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
ATXN2-227ENST00000616825 CRIPTQ9P021 101 aa11.32□□□□□ -0.6
ATXN2-227ENST00000616825 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
ATXN2-227ENST00000616825 DMBT1Q9UGM3 2413 aaPredicted RBP11.31□□□□□ -0.6
ATXN2-227ENST00000616825 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
ATXN2-227ENST00000616825 FRYLO94915 3013 aa11.3□□□□□ -0.6
ATXN2-227ENST00000616825 GCN1Q92616 2671 aaKnown RBP11.27□□□□□ -0.61
ATXN2-227ENST00000616825 UBR5O95071 2799 aaPredicted RBP11.27□□□□□ -0.61
ATXN2-227ENST00000616825 TNP2Q05952 138 aa11.25□□□□□ -0.61
ATXN2-227ENST00000616825 WIPF1O43516 503 aa11.24□□□□□ -0.61
ATXN2-227ENST00000616825 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
ATXN2-227ENST00000616825 SPANXA2-OT1Q8N9U9 137 aa11.24□□□□□ -0.61
ATXN2-227ENST00000616825 USP34Q70CQ2 3546 aa11.23□□□□□ -0.61
ATXN2-227ENST00000616825 MGAQ8IWI9 3026 aa11.22□□□□□ -0.61
ATXN2-227ENST00000616825 Q8N1X5 172 aa11.21□□□□□ -0.62
ATXN2-227ENST00000616825 NSD1Q96L73 2696 aaPredicted RBP11.2□□□□□ -0.62
ATXN2-227ENST00000616825 WDFY4Q6ZS81 3184 aa11.18□□□□□ -0.62
ATXN2-227ENST00000616825 CYSTM1Q9H1C7 97 aa11.18□□□□□ -0.62
ATXN2-227ENST00000616825 LINC01554Q52M75 96 aa11.18□□□□□ -0.62
ATXN2-227ENST00000616825 CD164Q04900 197 aa11.17□□□□□ -0.62
ATXN2-227ENST00000616825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
ATXN2-227ENST00000616825 PRR26Q8N8Z3 221 aa11.12□□□□□ -0.63
ATXN2-227ENST00000616825 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
ATXN2-227ENST00000616825 MYO15AQ9UKN7 3530 aa11.1□□□□□ -0.63
ATXN2-227ENST00000616825 A0A0D9SG42 100 aa11.1□□□□□ -0.63
ATXN2-227ENST00000616825 Q6ZSA8 131 aa11.09□□□□□ -0.63
ATXN2-227ENST00000616825 Q5XG85 94 aa11.07□□□□□ -0.64
ATXN2-227ENST00000616825 CDC42SE1Q9NRR8 79 aa11.07□□□□□ -0.64
ATXN2-227ENST00000616825 IGLV7-46A0A075B6I9 117 aa11.07□□□□□ -0.64
ATXN2-227ENST00000616825 IGSF10Q6WRI0 2623 aa11.07□□□□□ -0.64
ATXN2-227ENST00000616825 NBEAL2Q6ZNJ1 2754 aa11.05□□□□□ -0.64
ATXN2-227ENST00000616825 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
ATXN2-227ENST00000616825 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
ATXN2-227ENST00000616825 COL6A3P12111 3177 aa11.04□□□□□ -0.64
ATXN2-227ENST00000616825 OXTP01178 125 aa11.04□□□□□ -0.64
ATXN2-227ENST00000616825 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
ATXN2-227ENST00000616825 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
ATXN2-227ENST00000616825 SPRR1AP35321 89 aa10.97□□□□□ -0.65
ATXN2-227ENST00000616825 LCA10Q71F78 164 aa10.97□□□□□ -0.65
ATXN2-227ENST00000616825 HRES1P13985 223 aa10.96□□□□□ -0.65
ATXN2-227ENST00000616825 KALRNO60229 2985 aa10.95□□□□□ -0.66
ATXN2-227ENST00000616825 A0A1B0GU33 70 aa10.91□□□□□ -0.66
ATXN2-227ENST00000616825 CAMK2N1Q7Z7J9 78 aa10.9□□□□□ -0.66
ATXN2-227ENST00000616825 MMP24-AS1A0A0U1RRL7 71 aa10.9□□□□□ -0.66
ATXN2-227ENST00000616825 Q8NDZ9 215 aa10.9□□□□□ -0.66
ATXN2-227ENST00000616825 TACC2O95359 2948 aa10.9□□□□□ -0.66
ATXN2-227ENST00000616825 REV3LO60673 3130 aa10.89□□□□□ -0.67
ATXN2-227ENST00000616825 Q1T7F1 81 aa10.88□□□□□ -0.67
ATXN2-227ENST00000616825 SPRR1BP22528 89 aa10.88□□□□□ -0.67
ATXN2-227ENST00000616825 ZCCHC13Q8WW36 166 aaKnown RBP10.87□□□□□ -0.67
ATXN2-227ENST00000616825 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
ATXN2-227ENST00000616825 FP248Q71RG6 208 aaPredicted RBP10.85□□□□□ -0.67
ATXN2-227ENST00000616825 M0R2T5 61 aa10.84□□□□□ -0.67
ATXN2-227ENST00000616825 ADGRG4Q8IZF6 3080 aa10.84□□□□□ -0.67
ATXN2-227ENST00000616825 BOD1L1Q8NFC6 3051 aa10.83□□□□□ -0.68
ATXN2-227ENST00000616825 CSAG1Q6PB30 78 aa10.83□□□□□ -0.68
ATXN2-227ENST00000616825 LUZP6Q538Z0 58 aa10.82□□□□□ -0.68
ATXN2-227ENST00000616825 SPTBN5Q9NRC6 3674 aaKnown RBP10.82□□□□□ -0.68
ATXN2-227ENST00000616825 EYSQ5T1H1 3165 aa10.81□□□□□ -0.68
ATXN2-227ENST00000616825 LINC00472Q9H8W2 130 aa10.81□□□□□ -0.68
ATXN2-227ENST00000616825 KRTAP1-5Q9BYS1 174 aa10.8□□□□□ -0.68
ATXN2-227ENST00000616825 ITPR1Q14643 2758 aa10.79□□□□□ -0.68
ATXN2-227ENST00000616825 CFAP47Q6ZTR5 3102 aa10.76□□□□□ -0.69
ATXN2-227ENST00000616825 ITPR2Q14571 2701 aa10.75□□□□□ -0.69
ATXN2-227ENST00000616825 SPINK7P58062 85 aa10.75□□□□□ -0.69
ATXN2-227ENST00000616825 WDFY3Q8IZQ1 3526 aa10.74□□□□□ -0.69
ATXN2-227ENST00000616825 LINC01558Q9Y6Z2 57 aa10.74□□□□□ -0.69
ATXN2-227ENST00000616825 Q75L30 129 aa10.74□□□□□ -0.69
ATXN2-227ENST00000616825 HIVEP1P15822 2718 aa10.73□□□□□ -0.69
ATXN2-227ENST00000616825 Q5W150 140 aa10.73□□□□□ -0.69
ATXN2-227ENST00000616825 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
ATXN2-227ENST00000616825 KMT2BQ9UMN6 2715 aaPredicted RBP10.72□□□□□ -0.69
ATXN2-227ENST00000616825 DMXL2Q8TDJ6 3036 aa10.72□□□□□ -0.69
ATXN2-227ENST00000616825 FLNCQ14315 2725 aa10.71□□□□□ -0.7
ATXN2-227ENST00000616825 ZZEF1O43149 2961 aa10.7□□□□□ -0.7
ATXN2-227ENST00000616825 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
ATXN2-227ENST00000616825 SEC61BP60468 96 aaKnown RBP10.66□□□□□ -0.7
ATXN2-227ENST00000616825 S4R3F8 94 aa10.65□□□□□ -0.7
ATXN2-227ENST00000616825 TENM4Q6N022 2769 aa10.65□□□□□ -0.71
ATXN2-227ENST00000616825 DCHS1Q96JQ0 3298 aa10.64□□□□□ -0.71
ATXN2-227ENST00000616825 KRTAP10-1P60331 282 aa10.64□□□□□ -0.71
ATXN2-227ENST00000616825 LCE6AA0A183 80 aa10.63□□□□□ -0.71
ATXN2-227ENST00000616825 R4GN34 69 aa10.62□□□□□ -0.71
ATXN2-227ENST00000616825 LINC00483Q53H64 154 aa10.61□□□□□ -0.71
ATXN2-227ENST00000616825 Q5VSD8 79 aa10.6□□□□□ -0.71
ATXN2-227ENST00000616825 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
ATXN2-227ENST00000616825 LOC400499M0QZD8 3231 aa10.59□□□□□ -0.71
ATXN2-227ENST00000616825 LRBAP50851 2863 aa10.59□□□□□ -0.71
ATXN2-227ENST00000616825 UTP20O75691 2785 aaKnown RBP10.58□□□□□ -0.72
ATXN2-227ENST00000616825 Q5VV11 94 aa10.5□□□□□ -0.73
ATXN2-227ENST00000616825 ASH1LQ9NR48 2969 aaKnown RBP10.5□□□□□ -0.73
ATXN2-227ENST00000616825 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
ATXN2-227ENST00000616825 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
ATXN2-227ENST00000616825 PANO1I0J062 215 aa10.48□□□□□ -0.73
ATXN2-227ENST00000616825 Q6ZR54 194 aa10.47□□□□□ -0.73
ATXN2-227ENST00000616825 ATMQ13315 3056 aa10.46□□□□□ -0.73
ATXN2-227ENST00000616825 COL12A1Q99715 3063 aa10.46□□□□□ -0.74
ATXN2-227ENST00000616825 DMXL1Q9Y485 3027 aa10.46□□□□□ -0.74
ATXN2-227ENST00000616825 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms