RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CNOT1A5YKK6 2376 aaKnown RBP0.92□□□□□ -2.26
HMGB1P24-202ENST00000615653 MGAQ8IWI9 3026 aa0.91□□□□□ -2.26
HMGB1P24-202ENST00000615653 COL6A6A6NMZ7 2263 aa0.91□□□□□ -2.26
HMGB1P24-202ENST00000615653 TENM1Q9UKZ4 2725 aa0.91□□□□□ -2.26
HMGB1P24-202ENST00000615653 WT1-ASQ06250 92 aa0.91□□□□□ -2.26
HMGB1P24-202ENST00000615653 LELP1Q5T871 98 aa0.91□□□□□ -2.26
HMGB1P24-202ENST00000615653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.9□□□□□ -2.26
HMGB1P24-202ENST00000615653 WNK2Q9Y3S1 2297 aa0.9□□□□□ -2.26
HMGB1P24-202ENST00000615653 PIEZO2Q9H5I5 2752 aa0.9□□□□□ -2.27
HMGB1P24-202ENST00000615653 DEFB131AP59861 70 aa0.9□□□□□ -2.27
HMGB1P24-202ENST00000615653 LEAP2Q969E1 77 aa0.9□□□□□ -2.27
HMGB1P24-202ENST00000615653 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
HMGB1P24-202ENST00000615653 STATHP02808 62 aa0.89□□□□□ -2.27
HMGB1P24-202ENST00000615653 KLK9Q2XQG4 91 aa0.89□□□□□ -2.27
HMGB1P24-202ENST00000615653 RPL39P5Q59GN2 51 aa0.89□□□□□ -2.27
HMGB1P24-202ENST00000615653 TMEM167AQ8TBQ9 72 aa0.89□□□□□ -2.27
HMGB1P24-202ENST00000615653 RP1L1Q8IWN7 2480 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P24-202ENST00000615653 IGLV5-48A0A075B6I7 105 aa0.88□□□□□ -2.27
HMGB1P24-202ENST00000615653 DEFB108AA8MXU0 73 aa0.88□□□□□ -2.27
HMGB1P24-202ENST00000615653 M0QY20 66 aa0.88□□□□□ -2.27
HMGB1P24-202ENST00000615653 COX14Q96I36 57 aa0.88□□□□□ -2.27
HMGB1P24-202ENST00000615653 KAAG1Q9UBP8 84 aa0.88□□□□□ -2.27
HMGB1P24-202ENST00000615653 GPR98Q8WXG9 6306 aa0.87□□□□□ -2.27
HMGB1P24-202ENST00000615653 PCNTO95613 3336 aa0.87□□□□□ -2.27
HMGB1P24-202ENST00000615653 CHD7Q9P2D1 2997 aa0.87□□□□□ -2.27
HMGB1P24-202ENST00000615653 ASH1LQ9NR48 2969 aaKnown RBP0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 CEP350Q5VT06 3117 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 GOLGB1Q14789 3259 aaKnown RBP0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 H0YGG7 62 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 K7EIM0 57 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 PRLHP81277 87 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 DEFB109BQ30KR1 87 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 DEFB104AQ8WTQ1 72 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 NOP10Q9NPE3 64 aaKnown RBP0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 IGF2RP11717 2491 aa0.86□□□□□ -2.27
HMGB1P24-202ENST00000615653 SPTBN1Q01082 2364 aaKnown RBP0.85□□□□□ -2.27
HMGB1P24-202ENST00000615653 PTPRZ1P23471 2315 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P24-202ENST00000615653 SRCAPQ6ZRS2 3230 aa0.85□□□□□ -2.27
HMGB1P24-202ENST00000615653 SPTBN5Q9NRC6 3674 aaKnown RBP0.84□□□□□ -2.27
HMGB1P24-202ENST00000615653 USP34Q70CQ2 3546 aa0.84□□□□□ -2.27
HMGB1P24-202ENST00000615653 ACACAQ13085 2346 aa0.84□□□□□ -2.28
HMGB1P24-202ENST00000615653 WDR87Q6ZQQ6 2873 aa0.84□□□□□ -2.28
HMGB1P24-202ENST00000615653 UTRNP46939 3433 aa0.84□□□□□ -2.28
HMGB1P24-202ENST00000615653 RANBP2P49792 3224 aaKnown RBP0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 NBPF19A0A087WUL8 3843 aa0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 KRTAP10-4P60372 401 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 S4R3F8 94 aa0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 CENPFP49454 3210 aa0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
HMGB1P24-202ENST00000615653 ROS1P08922 2347 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 PCNX1Q96RV3 2341 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 CFAP54Q96N23 3096 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 A8MTW9 85 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 SZT2Q5T011 3432 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 PKDREJQ9NTG1 2253 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 ZNF462Q96JM2 2506 aa0.82□□□□□ -2.28
HMGB1P24-202ENST00000615653 TPRP12270 2363 aaKnown RBP0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 WNK1Q9H4A3 2382 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 APELAP0DMC3 54 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 DEFB110Q30KQ9 67 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 TENM2Q9NT68 2774 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 CFAP47Q6ZTR5 3102 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 VPS13AQ96RL7 3174 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 OTOGQ6ZRI0 2925 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 APC2O95996 2303 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 MKI67P46013 3256 aaKnown RBP0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
HMGB1P24-202ENST00000615653 PRUNE2Q8WUY3 3088 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 AKAP9Q99996 3911 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 AKAP6Q13023 2319 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPTA1P02549 2419 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 REV3LO60673 3130 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 CSPG4Q6UVK1 2322 aa0.8□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPEGQ15772 3267 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 NBEAQ8NFP9 2946 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 DEFB1P60022 68 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPINK6Q6UWN8 80 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPTBN2O15020 2390 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 DMDP11532 3685 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 MEGF8Q7Z7M0 2845 aa0.79□□□□□ -2.28
HMGB1P24-202ENST00000615653 ZFHX4Q86UP3 3567 aa0.78□□□□□ -2.28
HMGB1P24-202ENST00000615653 C5orf42Q9H799 3197 aa0.78□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPTBN4Q9H254 2564 aa0.78□□□□□ -2.28
HMGB1P24-202ENST00000615653 VPS13DQ5THJ4 4388 aa0.78□□□□□ -2.28
HMGB1P24-202ENST00000615653 SPINK1P00995 79 aa0.78□□□□□ -2.28
HMGB1P24-202ENST00000615653 FRYLO94915 3013 aa0.78□□□□□ -2.29
HMGB1P24-202ENST00000615653 CEP250Q9BV73 2442 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 UNC80Q8N2C7 3258 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 RELNP78509 3460 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 CD52P31358 61 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 ZZEF1O43149 2961 aa0.77□□□□□ -2.29
HMGB1P24-202ENST00000615653 HTTP42858 3142 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 CELSR2Q9HCU4 2923 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms