RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 CFAP54Q96N23 3096 aa9.36□□□□□ -0.91
TNXB-209ENST00000613214 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
TNXB-209ENST00000613214 BRCA2P51587 3418 aa9.34□□□□□ -0.91
TNXB-209ENST00000613214 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
TNXB-209ENST00000613214 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
TNXB-209ENST00000613214 LAMA3Q16787 3333 aa9.3□□□□□ -0.92
TNXB-209ENST00000613214 A0A0A0MQY5 61 aa9.3□□□□□ -0.92
TNXB-209ENST00000613214 CHD7Q9P2D1 2997 aa9.29□□□□□ -0.92
TNXB-209ENST00000613214 EPG5Q9HCE0 2579 aa9.28□□□□□ -0.92
TNXB-209ENST00000613214 FLG2Q5D862 2391 aaPredicted RBP9.28□□□□□ -0.92
TNXB-209ENST00000613214 Q75L30 129 aa9.27□□□□□ -0.93
TNXB-209ENST00000613214 FLNBO75369 2602 aaKnown RBP9.26□□□□□ -0.93
TNXB-209ENST00000613214 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
TNXB-209ENST00000613214 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
TNXB-209ENST00000613214 LCE6AA0A183 80 aa9.22□□□□□ -0.93
TNXB-209ENST00000613214 ATRQ13535 2644 aa9.21□□□□□ -0.94
TNXB-209ENST00000613214 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
TNXB-209ENST00000613214 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
TNXB-209ENST00000613214 A0A0C4DFX4 3053 aa9.19□□□□□ -0.94
TNXB-209ENST00000613214 PANO1I0J062 215 aa9.18□□□□□ -0.94
TNXB-209ENST00000613214 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
TNXB-209ENST00000613214 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
TNXB-209ENST00000613214 FLNAP21333 2647 aaKnown RBP9.17□□□□□ -0.94
TNXB-209ENST00000613214 ROMO1P60602 79 aa9.17□□□□□ -0.94
TNXB-209ENST00000613214 HTTP42858 3142 aa9.16□□□□□ -0.94
TNXB-209ENST00000613214 PRUNE2Q8WUY3 3088 aa9.16□□□□□ -0.94
TNXB-209ENST00000613214 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
TNXB-209ENST00000613214 FREM2Q5SZK8 3169 aa9.15□□□□□ -0.94
TNXB-209ENST00000613214 Q5VV11 94 aa9.15□□□□□ -0.94
TNXB-209ENST00000613214 LINC00472Q9H8W2 130 aa9.14□□□□□ -0.95
TNXB-209ENST00000613214 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
TNXB-209ENST00000613214 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
TNXB-209ENST00000613214 A0A087X002 238 aa9.11□□□□□ -0.95
TNXB-209ENST00000613214 Q6ZR54 194 aa9.09□□□□□ -0.95
TNXB-209ENST00000613214 TRIOO75962 3097 aa9.08□□□□□ -0.96
TNXB-209ENST00000613214 MAST4O15021 2626 aa9.08□□□□□ -0.96
TNXB-209ENST00000613214 CFAP46Q8IYW2 2715 aa9.07□□□□□ -0.96
TNXB-209ENST00000613214 SPRR1AP35321 89 aa9.07□□□□□ -0.96
TNXB-209ENST00000613214 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
TNXB-209ENST00000613214 OXTP01178 125 aa9.06□□□□□ -0.96
TNXB-209ENST00000613214 Q5XG85 94 aa9.06□□□□□ -0.96
TNXB-209ENST00000613214 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
TNXB-209ENST00000613214 CDH23Q9H251 3354 aa9.04□□□□□ -0.96
TNXB-209ENST00000613214 AKAP13Q12802 2813 aa9.02□□□□□ -0.97
TNXB-209ENST00000613214 NOTCH2NLQ7Z3S9 236 aa9□□□□□ -0.97
TNXB-209ENST00000613214 A8MU10 97 aa9□□□□□ -0.97
TNXB-209ENST00000613214 HELZ2Q9BYK8 2649 aaKnown RBP8.96□□□□□ -0.97
TNXB-209ENST00000613214 DNAH14Q0VDD8 3507 aa8.95□□□□□ -0.98
TNXB-209ENST00000613214 CHD9Q3L8U1 2897 aa8.95□□□□□ -0.98
TNXB-209ENST00000613214 CHD6Q8TD26 2715 aa8.93□□□□□ -0.98
TNXB-209ENST00000613214 A8MUU9 505 aa8.93□□□□□ -0.98
TNXB-209ENST00000613214 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
TNXB-209ENST00000613214 TEX15Q9BXT5 2789 aa8.93□□□□□ -0.98
TNXB-209ENST00000613214 MGAQ8IWI9 3026 aa8.93□□□□□ -0.98
TNXB-209ENST00000613214 SPRR1BP22528 89 aa8.91□□□□□ -0.98
TNXB-209ENST00000613214 SZT2Q5T011 3432 aa8.88□□□□□ -0.99
TNXB-209ENST00000613214 KRTAP11-1Q8IUC1 163 aa8.88□□□□□ -0.99
TNXB-209ENST00000613214 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
TNXB-209ENST00000613214 REV3LO60673 3130 aa8.85□□□□□ -0.99
TNXB-209ENST00000613214 NBEAL1Q6ZS30 2694 aa8.84□□□□□ -0.99
TNXB-209ENST00000613214 VPS13AQ96RL7 3174 aa8.82□□□□□ -1
TNXB-209ENST00000613214 STAB1Q9NY15 2570 aa8.82□□□□□ -1
TNXB-209ENST00000613214 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
TNXB-209ENST00000613214 FRYQ5TBA9 3013 aa8.8□□□□□ -1
TNXB-209ENST00000613214 CENPEQ02224 2701 aa8.79□□□□□ -1
TNXB-209ENST00000613214 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
TNXB-209ENST00000613214 TEP1Q99973 2627 aaKnown RBP8.79□□□□□ -1
TNXB-209ENST00000613214 COL6A3P12111 3177 aa8.78□□□□□ -1
TNXB-209ENST00000613214 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
TNXB-209ENST00000613214 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
TNXB-209ENST00000613214 CFAP47Q6ZTR5 3102 aa8.72□□□□□ -1.01
TNXB-209ENST00000613214 TRANK1O15050 2925 aa8.7□□□□□ -1.02
TNXB-209ENST00000613214 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
TNXB-209ENST00000613214 VCANP13611 3396 aa8.67□□□□□ -1.02
TNXB-209ENST00000613214 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
TNXB-209ENST00000613214 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.03
TNXB-209ENST00000613214 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
TNXB-209ENST00000613214 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
TNXB-209ENST00000613214 SPEGQ15772 3267 aa8.64□□□□□ -1.03
TNXB-209ENST00000613214 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
TNXB-209ENST00000613214 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
TNXB-209ENST00000613214 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
TNXB-209ENST00000613214 NBEAL2Q6ZNJ1 2754 aa8.61□□□□□ -1.03
TNXB-209ENST00000613214 KRTAP25-1Q3LHN0 102 aa8.6□□□□□ -1.03
TNXB-209ENST00000613214 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
TNXB-209ENST00000613214 GCN1Q92616 2671 aaKnown RBP8.59□□□□□ -1.03
TNXB-209ENST00000613214 LAMA1P25391 3075 aa8.58□□□□□ -1.04
TNXB-209ENST00000613214 TNP1P09430 55 aa8.58□□□□□ -1.04
TNXB-209ENST00000613214 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
TNXB-209ENST00000613214 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
TNXB-209ENST00000613214 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
TNXB-209ENST00000613214 MAP1AP78559 2803 aaPredicted RBP8.53□□□□□ -1.04
TNXB-209ENST00000613214 KALRNO60229 2985 aa8.52□□□□□ -1.05
TNXB-209ENST00000613214 BAHCC1Q9P281 2608 aa8.48□□□□□ -1.05
TNXB-209ENST00000613214 DMXL2Q8TDJ6 3036 aa8.47□□□□□ -1.05
TNXB-209ENST00000613214 ZNF292O60281 2723 aa8.46□□□□□ -1.05
TNXB-209ENST00000613214 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
TNXB-209ENST00000613214 SPTBN5Q9NRC6 3674 aaKnown RBP8.42□□□□□ -1.06
TNXB-209ENST00000613214 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
TNXB-209ENST00000613214 KRTAP10-10P60014 251 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms