RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 UBL5Q9BZL1 73 aa13.79□□□□□ -0.2
UBE3C-209ENST00000611269 ST20-AS1Q8NBB2 130 aa13.78□□□□□ -0.2
UBE3C-209ENST00000611269 FAM19A1Q7Z5A9 133 aa13.78□□□□□ -0.2
UBE3C-209ENST00000611269 ATP5EP2Q5VTU8 51 aa13.76□□□□□ -0.21
UBE3C-209ENST00000611269 KRTAP11-1Q8IUC1 163 aa13.76□□□□□ -0.21
UBE3C-209ENST00000611269 APOBP04114 4563 aaKnown RBP13.75□□□□□ -0.21
UBE3C-209ENST00000611269 H0Y9J4 135 aa13.75□□□□□ -0.21
UBE3C-209ENST00000611269 IGKV3D-7A0A0C4DH55 119 aa13.74□□□□□ -0.21
UBE3C-209ENST00000611269 PRLHP81277 87 aa13.72□□□□□ -0.21
UBE3C-209ENST00000611269 ANAPC13Q9BS18 74 aa13.72□□□□□ -0.21
UBE3C-209ENST00000611269 C3orf22Q8N5N4 141 aa13.7□□□□□ -0.22
UBE3C-209ENST00000611269 Q6ZVQ6 151 aa13.69□□□□□ -0.22
UBE3C-209ENST00000611269 SMIM29Q86T20 159 aa13.67□□□□□ -0.22
UBE3C-209ENST00000611269 FAM236AA0A1B0GUQ0 79 aa13.67□□□□□ -0.22
UBE3C-209ENST00000611269 FAM236BA0A1B0GV22 79 aa13.67□□□□□ -0.22
UBE3C-209ENST00000611269 HIGD2AQ9BW72 106 aa13.66□□□□□ -0.22
UBE3C-209ENST00000611269 A0A1B0GW54 56 aa13.64□□□□□ -0.23
UBE3C-209ENST00000611269 BCE1O60756 84 aa13.64□□□□□ -0.23
UBE3C-209ENST00000611269 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
UBE3C-209ENST00000611269 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
UBE3C-209ENST00000611269 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
UBE3C-209ENST00000611269 HIST1H4AP62805 103 aaKnown RBP13.63□□□□□ -0.23
UBE3C-209ENST00000611269 C1orf137Q5JT78 98 aa13.63□□□□□ -0.23
UBE3C-209ENST00000611269 UBE2AP49459 152 aa13.61□□□□□ -0.23
UBE3C-209ENST00000611269 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
UBE3C-209ENST00000611269 CXCL6P80162 114 aa13.59□□□□□ -0.23
UBE3C-209ENST00000611269 A0A1W2PNM2 257 aa13.59□□□□□ -0.23
UBE3C-209ENST00000611269 SPRR1BP22528 89 aa13.59□□□□□ -0.23
UBE3C-209ENST00000611269 F8WEM9 126 aa13.58□□□□□ -0.24
UBE3C-209ENST00000611269 VPS13BQ7Z7G8 4022 aa13.57□□□□□ -0.24
UBE3C-209ENST00000611269 IGLV8-61A0A075B6I0 122 aa13.57□□□□□ -0.24
UBE3C-209ENST00000611269 A0A087WVE0 104 aa13.57□□□□□ -0.24
UBE3C-209ENST00000611269 HSPG2P98160 4391 aa13.56□□□□□ -0.24
UBE3C-209ENST00000611269 Q8NBF4 154 aa13.56□□□□□ -0.24
UBE3C-209ENST00000611269 SPRR4Q96PI1 79 aa13.55□□□□□ -0.24
UBE3C-209ENST00000611269 RYR1P21817 5038 aa13.53□□□□□ -0.24
UBE3C-209ENST00000611269 NREPQ16612 68 aa13.53□□□□□ -0.24
UBE3C-209ENST00000611269 KIAA1109Q2LD37 5005 aa13.52□□□□□ -0.24
UBE3C-209ENST00000611269 ATOX1O00244 68 aa13.52□□□□□ -0.25
UBE3C-209ENST00000611269 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
UBE3C-209ENST00000611269 FAT1Q14517 4588 aa13.51□□□□□ -0.25
UBE3C-209ENST00000611269 IGLV7-43P04211 117 aa13.48□□□□□ -0.25
UBE3C-209ENST00000611269 CRYGAP11844 174 aa13.48□□□□□ -0.25
UBE3C-209ENST00000611269 IGFL1Q6UW32 110 aa13.48□□□□□ -0.25
UBE3C-209ENST00000611269 SRRM2Q9UQ35 2752 aaKnown RBP13.45□□□□□ -0.26
UBE3C-209ENST00000611269 CCDC179H3BU77 68 aa13.44□□□□□ -0.26
UBE3C-209ENST00000611269 ZNF861PO60384 105 aa13.44□□□□□ -0.26
UBE3C-209ENST00000611269 FAM229AH3BQW9 127 aa13.42□□□□□ -0.26
UBE3C-209ENST00000611269 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
UBE3C-209ENST00000611269 BIRC6Q9NR09 4857 aa13.42□□□□□ -0.26
UBE3C-209ENST00000611269 KRTAP17-1Q9BYP8 105 aa13.42□□□□□ -0.26
UBE3C-209ENST00000611269 BPY2O14599 106 aa13.41□□□□□ -0.26
UBE3C-209ENST00000611269 Q5VSD8 79 aa13.4□□□□□ -0.26
UBE3C-209ENST00000611269 A0A0G2JQZ4 141 aa13.4□□□□□ -0.26
UBE3C-209ENST00000611269 PLA2G1BP04054 148 aaKnown RBP13.38□□□□□ -0.27
UBE3C-209ENST00000611269 LINC00483Q53H64 154 aa13.38□□□□□ -0.27
UBE3C-209ENST00000611269 UQCRQO14949 82 aa13.37□□□□□ -0.27
UBE3C-209ENST00000611269 COX7CP15954 63 aa13.37□□□□□ -0.27
UBE3C-209ENST00000611269 ZNF706Q9Y5V0 76 aaPredicted RBP13.37□□□□□ -0.27
UBE3C-209ENST00000611269 Q8N1X5 172 aa13.36□□□□□ -0.27
UBE3C-209ENST00000611269 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
UBE3C-209ENST00000611269 IGKV4-1P06312 121 aa13.33□□□□□ -0.28
UBE3C-209ENST00000611269 SPINK6Q6UWN8 80 aa13.29□□□□□ -0.28
UBE3C-209ENST00000611269 Q8N9L7 120 aa13.29□□□□□ -0.28
UBE3C-209ENST00000611269 A0A087WSZ3 146 aa13.29□□□□□ -0.28
UBE3C-209ENST00000611269 SMIM20Q8N5G0 67 aa13.26□□□□□ -0.29
UBE3C-209ENST00000611269 DSCR10P59022 87 aa13.25□□□□□ -0.29
UBE3C-209ENST00000611269 C9orf153Q5TBE3 101 aa13.25□□□□□ -0.29
UBE3C-209ENST00000611269 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
UBE3C-209ENST00000611269 TRAV7A0A075B6U4 112 aa13.22□□□□□ -0.29
UBE3C-209ENST00000611269 PKHD1L1Q86WI1 4243 aa13.22□□□□□ -0.29
UBE3C-209ENST00000611269 ANAPC11Q9NYG5 84 aa13.21□□□□□ -0.3
UBE3C-209ENST00000611269 KRTAP4-5Q9BYR2 181 aa13.18□□□□□ -0.3
UBE3C-209ENST00000611269 KRTAP1-4P0C5Y4 121 aa13.16□□□□□ -0.3
UBE3C-209ENST00000611269 HERC2O95714 4834 aa13.16□□□□□ -0.3
UBE3C-209ENST00000611269 K7EQZ3 153 aa13.15□□□□□ -0.3
UBE3C-209ENST00000611269 LINC00472Q9H8W2 130 aa13.14□□□□□ -0.31
UBE3C-209ENST00000611269 MOBPQ13875 183 aa13.13□□□□□ -0.31
UBE3C-209ENST00000611269 DEFB116Q30KQ4 102 aa13.13□□□□□ -0.31
UBE3C-209ENST00000611269 A0A087X002 238 aa13.08□□□□□ -0.32
UBE3C-209ENST00000611269 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
UBE3C-209ENST00000611269 OCR1Q9BZK8 76 aa13.07□□□□□ -0.32
UBE3C-209ENST00000611269 J3KT08 172 aa13.06□□□□□ -0.32
UBE3C-209ENST00000611269 FLG2Q5D862 2391 aaPredicted RBP13.05□□□□□ -0.32
UBE3C-209ENST00000611269 SS18L2Q9UHA2 77 aa13.05□□□□□ -0.32
UBE3C-209ENST00000611269 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
UBE3C-209ENST00000611269 CYSTM1Q9H1C7 97 aa13.04□□□□□ -0.32
UBE3C-209ENST00000611269 A8MWP4 228 aa13.04□□□□□ -0.32
UBE3C-209ENST00000611269 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
UBE3C-209ENST00000611269 HRCT1Q6UXD1 115 aa13.03□□□□□ -0.32
UBE3C-209ENST00000611269 KRTAP13-2Q52LG2 175 aa13.02□□□□□ -0.32
UBE3C-209ENST00000611269 SSBP3-AS1Q7Z2R9 100 aa13.02□□□□□ -0.32
UBE3C-209ENST00000611269 PRR15Q8IV56 129 aa13.02□□□□□ -0.32
UBE3C-209ENST00000611269 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.33
UBE3C-209ENST00000611269 Q96NJ1 140 aa13.01□□□□□ -0.33
UBE3C-209ENST00000611269 LRP1Q07954 4544 aaKnown RBP13□□□□□ -0.33
UBE3C-209ENST00000611269 MYCBP2O75592 4640 aa12.98□□□□□ -0.33
UBE3C-209ENST00000611269 CD164Q04900 197 aa12.98□□□□□ -0.33
UBE3C-209ENST00000611269 KLKP1Q107X0 134 aa12.98□□□□□ -0.33
UBE3C-209ENST00000611269 ABCA13Q86UQ4 5058 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms