RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
TPM1-233ENST00000610733 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
TPM1-233ENST00000610733 NDUFB1O75438 58 aa6.24□□□□□ -1.41
TPM1-233ENST00000610733 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
TPM1-233ENST00000610733 KRTAP24-1Q3LI83 254 aa6.23□□□□□ -1.41
TPM1-233ENST00000610733 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
TPM1-233ENST00000610733 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
TPM1-233ENST00000610733 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
TPM1-233ENST00000610733 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
TPM1-233ENST00000610733 Q8NBF4 154 aa6.22□□□□□ -1.41
TPM1-233ENST00000610733 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
TPM1-233ENST00000610733 GVQW2A0A096LPI5 108 aaPredicted RBP6.21□□□□□ -1.42
TPM1-233ENST00000610733 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
TPM1-233ENST00000610733 Q1T7F1 81 aa6.2□□□□□ -1.42
TPM1-233ENST00000610733 B9D2Q9BPU9 175 aa6.2□□□□□ -1.42
TPM1-233ENST00000610733 H0Y9P7 68 aa6.19□□□□□ -1.42
TPM1-233ENST00000610733 DNAH10OSP0CZ25 163 aa6.19□□□□□ -1.42
TPM1-233ENST00000610733 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
TPM1-233ENST00000610733 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
TPM1-233ENST00000610733 A6NED7 52 aa6.18□□□□□ -1.42
TPM1-233ENST00000610733 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
TPM1-233ENST00000610733 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
TPM1-233ENST00000610733 IGLV1-50A0A075B6I6 118 aa6.17□□□□□ -1.42
TPM1-233ENST00000610733 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
TPM1-233ENST00000610733 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
TPM1-233ENST00000610733 A8MUN3 132 aa6.16□□□□□ -1.42
TPM1-233ENST00000610733 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
TPM1-233ENST00000610733 LCA10Q71F78 164 aa6.15□□□□□ -1.42
TPM1-233ENST00000610733 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.43
TPM1-233ENST00000610733 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
TPM1-233ENST00000610733 hDV103S1A0JD37 113 aa6.13□□□□□ -1.43
TPM1-233ENST00000610733 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
TPM1-233ENST00000610733 OCR1Q9BZK8 76 aa6.13□□□□□ -1.43
TPM1-233ENST00000610733 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
TPM1-233ENST00000610733 TGP01266 2768 aa6.13□□□□□ -1.43
TPM1-233ENST00000610733 SPAG11AQ6PDA7 123 aa6.12□□□□□ -1.43
TPM1-233ENST00000610733 DSCR10P59022 87 aa6.11□□□□□ -1.43
TPM1-233ENST00000610733 MOBPQ13875 183 aa6.1□□□□□ -1.43
TPM1-233ENST00000610733 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
TPM1-233ENST00000610733 H3BNG1 76 aa6.08□□□□□ -1.44
TPM1-233ENST00000610733 KRTAP26-1Q6PEX3 210 aa6.08□□□□□ -1.44
TPM1-233ENST00000610733 K7EIL1 84 aa6.07□□□□□ -1.44
TPM1-233ENST00000610733 MDFIQ99750 246 aa6.07□□□□□ -1.44
TPM1-233ENST00000610733 LIMD2Q9BT23 127 aa6.07□□□□□ -1.44
TPM1-233ENST00000610733 IGLV5-48A0A075B6I7 105 aa6.07□□□□□ -1.44
TPM1-233ENST00000610733 LY6G6CO95867 125 aa6.07□□□□□ -1.44
TPM1-233ENST00000610733 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
TPM1-233ENST00000610733 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
TPM1-233ENST00000610733 C16orf90A8MZG2 172 aa6.05□□□□□ -1.44
TPM1-233ENST00000610733 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
TPM1-233ENST00000610733 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
TPM1-233ENST00000610733 SPINK1P00995 79 aa6.03□□□□□ -1.44
TPM1-233ENST00000610733 Q5VV11 94 aa6.01□□□□□ -1.45
TPM1-233ENST00000610733 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
TPM1-233ENST00000610733 A8MU10 97 aa5.99□□□□□ -1.45
TPM1-233ENST00000610733 A6NN06 94 aa5.99□□□□□ -1.45
TPM1-233ENST00000610733 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
TPM1-233ENST00000610733 A8MWP4 228 aa5.98□□□□□ -1.45
TPM1-233ENST00000610733 COA5Q86WW8 74 aa5.98□□□□□ -1.45
TPM1-233ENST00000610733 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
TPM1-233ENST00000610733 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
TPM1-233ENST00000610733 IGLV5-52A0A0A0MRZ9 124 aa5.97□□□□□ -1.45
TPM1-233ENST00000610733 PANO1I0J062 215 aa5.97□□□□□ -1.45
TPM1-233ENST00000610733 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
TPM1-233ENST00000610733 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
TPM1-233ENST00000610733 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
TPM1-233ENST00000610733 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.45
TPM1-233ENST00000610733 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.46
TPM1-233ENST00000610733 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
TPM1-233ENST00000610733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
TPM1-233ENST00000610733 CNBPP62633 177 aaKnown RBP5.94□□□□□ -1.46
TPM1-233ENST00000610733 SPACA4Q8TDM5 124 aa5.94□□□□□ -1.46
TPM1-233ENST00000610733 ANK3Q12955 4377 aaKnown RBP5.94□□□□□ -1.46
TPM1-233ENST00000610733 SPRR1AP35321 89 aa5.93□□□□□ -1.46
TPM1-233ENST00000610733 KRTAP4-16G5E9R7 235 aaPredicted RBP5.93□□□□□ -1.46
TPM1-233ENST00000610733 RTL8CO15255 209 aa5.92□□□□□ -1.46
TPM1-233ENST00000610733 Q75L30 129 aa5.92□□□□□ -1.46
TPM1-233ENST00000610733 FBN3Q75N90 2809 aa5.92□□□□□ -1.46
TPM1-233ENST00000610733 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
TPM1-233ENST00000610733 TNP2Q05952 138 aa5.91□□□□□ -1.46
TPM1-233ENST00000610733 PSORS1C2Q9UIG4 136 aa5.91□□□□□ -1.46
TPM1-233ENST00000610733 PLA2G2DQ9UNK4 145 aa5.91□□□□□ -1.46
TPM1-233ENST00000610733 FLG2Q5D862 2391 aaPredicted RBP5.91□□□□□ -1.46
TPM1-233ENST00000610733 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
TPM1-233ENST00000610733 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
TPM1-233ENST00000610733 A0A1B0GW54 56 aa5.9□□□□□ -1.47
TPM1-233ENST00000610733 LINC00313P59037 77 aa5.89□□□□□ -1.47
TPM1-233ENST00000610733 ZNF706Q9Y5V0 76 aaPredicted RBP5.89□□□□□ -1.47
TPM1-233ENST00000610733 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
TPM1-233ENST00000610733 NUPR2A6NF83 97 aa5.88□□□□□ -1.47
TPM1-233ENST00000610733 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
TPM1-233ENST00000610733 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
TPM1-233ENST00000610733 C1orf134Q5TEV5 83 aa5.86□□□□□ -1.47
TPM1-233ENST00000610733 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
TPM1-233ENST00000610733 A0A087X002 238 aa5.86□□□□□ -1.47
TPM1-233ENST00000610733 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
TPM1-233ENST00000610733 MMP24-AS1A0A0U1RRL7 71 aa5.85□□□□□ -1.47
TPM1-233ENST00000610733 A0A1B0GVX0 72 aa5.85□□□□□ -1.47
TPM1-233ENST00000610733 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
TPM1-233ENST00000610733 A0A087WTM6 91 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms