RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.38□□□□□ -0.91
SSBP4-213ENST00000602088 LIMD2Q9BT23 127 aa9.38□□□□□ -0.91
SSBP4-213ENST00000602088 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
SSBP4-213ENST00000602088 KRTAP13-3Q3SY46 172 aa9.37□□□□□ -0.91
SSBP4-213ENST00000602088 H0YGX0 51 aa9.36□□□□□ -0.91
SSBP4-213ENST00000602088 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
SSBP4-213ENST00000602088 HSD52Q0P140 79 aa9.35□□□□□ -0.91
SSBP4-213ENST00000602088 UQCR10Q9UDW1 63 aa9.34□□□□□ -0.91
SSBP4-213ENST00000602088 F8WEM9 126 aa9.33□□□□□ -0.92
SSBP4-213ENST00000602088 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
SSBP4-213ENST00000602088 Q5XG85 94 aa9.32□□□□□ -0.92
SSBP4-213ENST00000602088 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
SSBP4-213ENST00000602088 IGLV8-61A0A075B6I0 122 aa9.31□□□□□ -0.92
SSBP4-213ENST00000602088 SNCGO76070 127 aa9.31□□□□□ -0.92
SSBP4-213ENST00000602088 MUC2Q02817 5179 aa9.31□□□□□ -0.92
SSBP4-213ENST00000602088 OCIAD2Q56VL3 154 aa9.3□□□□□ -0.92
SSBP4-213ENST00000602088 TRIAP1O43715 76 aa9.28□□□□□ -0.92
SSBP4-213ENST00000602088 Q6JHZ5 121 aa9.28□□□□□ -0.92
SSBP4-213ENST00000602088 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
SSBP4-213ENST00000602088 A0A1B0GX51 115 aa9.27□□□□□ -0.93
SSBP4-213ENST00000602088 K7ERJ3 54 aa9.26□□□□□ -0.93
SSBP4-213ENST00000602088 IGFL1Q6UW32 110 aa9.26□□□□□ -0.93
SSBP4-213ENST00000602088 CLEC2BQ92478 149 aa9.25□□□□□ -0.93
SSBP4-213ENST00000602088 C1orf195Q5TG92 126 aa9.24□□□□□ -0.93
SSBP4-213ENST00000602088 MUC17Q685J3 4493 aa9.24□□□□□ -0.93
SSBP4-213ENST00000602088 TCL1BO95988 128 aa9.22□□□□□ -0.93
SSBP4-213ENST00000602088 H3BUT2 72 aa9.21□□□□□ -0.94
SSBP4-213ENST00000602088 PSMB2P49721 201 aa9.21□□□□□ -0.94
SSBP4-213ENST00000602088 GHRHP01286 108 aa9.2□□□□□ -0.94
SSBP4-213ENST00000602088 NDUFV3P56181 108 aaKnown RBP9.2□□□□□ -0.94
SSBP4-213ENST00000602088 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
SSBP4-213ENST00000602088 XP32Q5T750 250 aa9.2□□□□□ -0.94
SSBP4-213ENST00000602088 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
SSBP4-213ENST00000602088 COX6CP09669 75 aa9.19□□□□□ -0.94
SSBP4-213ENST00000602088 SMIM6P0DI80 62 aa9.18□□□□□ -0.94
SSBP4-213ENST00000602088 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
SSBP4-213ENST00000602088 FABP2P12104 132 aa9.16□□□□□ -0.94
SSBP4-213ENST00000602088 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
SSBP4-213ENST00000602088 H3BMG7 143 aa9.15□□□□□ -0.94
SSBP4-213ENST00000602088 DNAL4O96015 105 aa9.15□□□□□ -0.94
SSBP4-213ENST00000602088 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
SSBP4-213ENST00000602088 Q6Q795 121 aa9.14□□□□□ -0.95
SSBP4-213ENST00000602088 ORMDL1Q9P0S3 153 aa9.13□□□□□ -0.95
SSBP4-213ENST00000602088 H3BQ85 93 aa9.12□□□□□ -0.95
SSBP4-213ENST00000602088 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
SSBP4-213ENST00000602088 M0R143 59 aa9.1□□□□□ -0.95
SSBP4-213ENST00000602088 TMEM256-PLSCR3K7ERE1 68 aa9.09□□□□□ -0.95
SSBP4-213ENST00000602088 TRACP01848 142 aa9.09□□□□□ -0.95
SSBP4-213ENST00000602088 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
SSBP4-213ENST00000602088 LOC105371267A0A1B0GV96 52 aa9.08□□□□□ -0.96
SSBP4-213ENST00000602088 LST1O00453 97 aa9.08□□□□□ -0.96
SSBP4-213ENST00000602088 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
SSBP4-213ENST00000602088 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
SSBP4-213ENST00000602088 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
SSBP4-213ENST00000602088 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
SSBP4-213ENST00000602088 A0A1W2PNM2 257 aa9.04□□□□□ -0.96
SSBP4-213ENST00000602088 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
SSBP4-213ENST00000602088 A0A087WSZ3 146 aa9.03□□□□□ -0.96
SSBP4-213ENST00000602088 ANKRD29Q8N6D5 301 aa9.03□□□□□ -0.96
SSBP4-213ENST00000602088 A0A1B0GV72 72 aa9.02□□□□□ -0.97
SSBP4-213ENST00000602088 PCOTHQ58A44 107 aa9.02□□□□□ -0.97
SSBP4-213ENST00000602088 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
SSBP4-213ENST00000602088 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
SSBP4-213ENST00000602088 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
SSBP4-213ENST00000602088 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
SSBP4-213ENST00000602088 Q96NJ1 140 aa8.98□□□□□ -0.97
SSBP4-213ENST00000602088 BAALC-AS2P0C853 105 aa8.97□□□□□ -0.97
SSBP4-213ENST00000602088 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
SSBP4-213ENST00000602088 CCKP06307 115 aa8.95□□□□□ -0.98
SSBP4-213ENST00000602088 OBSCN-AS1Q96MR7 158 aa8.95□□□□□ -0.98
SSBP4-213ENST00000602088 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
SSBP4-213ENST00000602088 BATFQ16520 125 aa8.94□□□□□ -0.98
SSBP4-213ENST00000602088 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
SSBP4-213ENST00000602088 LYRM7Q5U5X0 104 aa8.9□□□□□ -0.98
SSBP4-213ENST00000602088 TRBV20-1A0A075B6N2 111 aa8.88□□□□□ -0.99
SSBP4-213ENST00000602088 Q75L30 129 aa8.88□□□□□ -0.99
SSBP4-213ENST00000602088 VPS25Q9BRG1 176 aa8.88□□□□□ -0.99
SSBP4-213ENST00000602088 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
SSBP4-213ENST00000602088 C9JAW5 83 aa8.87□□□□□ -0.99
SSBP4-213ENST00000602088 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
SSBP4-213ENST00000602088 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
SSBP4-213ENST00000602088 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
SSBP4-213ENST00000602088 JMJD7-PLA2G4BH0Y9G9 81 aa8.85□□□□□ -0.99
SSBP4-213ENST00000602088 TAX1BP3O14907 124 aa8.85□□□□□ -0.99
SSBP4-213ENST00000602088 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
SSBP4-213ENST00000602088 DSCR10P59022 87 aa8.83□□□□□ -1
SSBP4-213ENST00000602088 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
SSBP4-213ENST00000602088 LCE2CQ5TA81 110 aa8.83□□□□□ -1
SSBP4-213ENST00000602088 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
SSBP4-213ENST00000602088 C21orf62-AS1Q17RA5 79 aa8.82□□□□□ -1
SSBP4-213ENST00000602088 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
SSBP4-213ENST00000602088 A8MUU9 505 aa8.81□□□□□ -1
SSBP4-213ENST00000602088 Q6ZQT0 140 aa8.81□□□□□ -1
SSBP4-213ENST00000602088 LOC110117498A0A087WWA1 95 aa8.8□□□□□ -1
SSBP4-213ENST00000602088 A0A1W2PPM0 123 aa8.8□□□□□ -1
SSBP4-213ENST00000602088 LINC00313P59037 77 aa8.8□□□□□ -1
SSBP4-213ENST00000602088 PDE6GP18545 87 aa8.78□□□□□ -1
SSBP4-213ENST00000602088 A0A1B0GW54 56 aa8.77□□□□□ -1.01
SSBP4-213ENST00000602088 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
SSBP4-213ENST00000602088 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms