RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.52□□□□□ -0.89
TRIM28-215ENST00000601150 H0YGX0 51 aa9.51□□□□□ -0.89
TRIM28-215ENST00000601150 CD164Q04900 197 aa9.51□□□□□ -0.89
TRIM28-215ENST00000601150 F8WEM9 126 aa9.5□□□□□ -0.89
TRIM28-215ENST00000601150 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
TRIM28-215ENST00000601150 SNCGO76070 127 aa9.49□□□□□ -0.89
TRIM28-215ENST00000601150 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
TRIM28-215ENST00000601150 PPDPFLQ8WWR9 84 aa9.48□□□□□ -0.89
TRIM28-215ENST00000601150 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
TRIM28-215ENST00000601150 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
TRIM28-215ENST00000601150 FAM218AQ96MZ4 157 aa9.44□□□□□ -0.9
TRIM28-215ENST00000601150 K7ERJ3 54 aa9.43□□□□□ -0.9
TRIM28-215ENST00000601150 TRIAP1O43715 76 aa9.43□□□□□ -0.9
TRIM28-215ENST00000601150 OCIAD2Q56VL3 154 aa9.43□□□□□ -0.9
TRIM28-215ENST00000601150 SNHG12Q9BXW3 62 aa9.43□□□□□ -0.9
TRIM28-215ENST00000601150 IGLV8-61A0A075B6I0 122 aa9.42□□□□□ -0.9
TRIM28-215ENST00000601150 A0A1B0GX51 115 aa9.42□□□□□ -0.9
TRIM28-215ENST00000601150 Q6JHZ5 121 aa9.42□□□□□ -0.9
TRIM28-215ENST00000601150 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
TRIM28-215ENST00000601150 SMIM6P0DI80 62 aa9.41□□□□□ -0.9
TRIM28-215ENST00000601150 Q5XG85 94 aa9.41□□□□□ -0.9
TRIM28-215ENST00000601150 PSMB2P49721 201 aa9.4□□□□□ -0.9
TRIM28-215ENST00000601150 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
TRIM28-215ENST00000601150 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
TRIM28-215ENST00000601150 GHRHP01286 108 aa9.37□□□□□ -0.91
TRIM28-215ENST00000601150 COX6CP09669 75 aa9.36□□□□□ -0.91
TRIM28-215ENST00000601150 TCL1BO95988 128 aa9.35□□□□□ -0.91
TRIM28-215ENST00000601150 H3BUT2 72 aa9.34□□□□□ -0.91
TRIM28-215ENST00000601150 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
TRIM28-215ENST00000601150 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
TRIM28-215ENST00000601150 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
TRIM28-215ENST00000601150 DNAL4O96015 105 aa9.32□□□□□ -0.92
TRIM28-215ENST00000601150 FABP2P12104 132 aa9.32□□□□□ -0.92
TRIM28-215ENST00000601150 M0R143 59 aa9.31□□□□□ -0.92
TRIM28-215ENST00000601150 LOC105371267A0A1B0GV96 52 aa9.29□□□□□ -0.92
TRIM28-215ENST00000601150 H3BQ85 93 aa9.29□□□□□ -0.92
TRIM28-215ENST00000601150 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
TRIM28-215ENST00000601150 H3BMG7 143 aa9.28□□□□□ -0.92
TRIM28-215ENST00000601150 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
TRIM28-215ENST00000601150 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
TRIM28-215ENST00000601150 XP32Q5T750 250 aa9.27□□□□□ -0.93
TRIM28-215ENST00000601150 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
TRIM28-215ENST00000601150 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
TRIM28-215ENST00000601150 C9orf92A6NGG3 77 aa9.25□□□□□ -0.93
TRIM28-215ENST00000601150 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
TRIM28-215ENST00000601150 Q6Q795 121 aa9.25□□□□□ -0.93
TRIM28-215ENST00000601150 TMEM256-PLSCR3K7ERE1 68 aa9.24□□□□□ -0.93
TRIM28-215ENST00000601150 TRACP01848 142 aa9.24□□□□□ -0.93
TRIM28-215ENST00000601150 TEN1Q86WV5 123 aa9.24□□□□□ -0.93
TRIM28-215ENST00000601150 LST1O00453 97 aa9.23□□□□□ -0.93
TRIM28-215ENST00000601150 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
TRIM28-215ENST00000601150 SS18L2Q9UHA2 77 aa9.21□□□□□ -0.94
TRIM28-215ENST00000601150 MUC2Q02817 5179 aa9.2□□□□□ -0.94
TRIM28-215ENST00000601150 UBE2V1Q13404 147 aa9.19□□□□□ -0.94
TRIM28-215ENST00000601150 ANKRD29Q8N6D5 301 aa9.19□□□□□ -0.94
TRIM28-215ENST00000601150 A0A1B0GV72 72 aa9.17□□□□□ -0.94
TRIM28-215ENST00000601150 NAA38Q9BRA0 125 aaKnown RBP9.17□□□□□ -0.94
TRIM28-215ENST00000601150 A0A087WSZ3 146 aa9.16□□□□□ -0.94
TRIM28-215ENST00000601150 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
TRIM28-215ENST00000601150 BATFQ16520 125 aa9.15□□□□□ -0.94
TRIM28-215ENST00000601150 ATXN8Q156A1 80 aa9.14□□□□□ -0.95
TRIM28-215ENST00000601150 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
TRIM28-215ENST00000601150 BAALC-AS2P0C853 105 aa9.12□□□□□ -0.95
TRIM28-215ENST00000601150 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
TRIM28-215ENST00000601150 CCKP06307 115 aa9.1□□□□□ -0.95
TRIM28-215ENST00000601150 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
TRIM28-215ENST00000601150 KRTAP4-1Q9BYQ7 146 aa9.1□□□□□ -0.95
TRIM28-215ENST00000601150 RBM3P98179 157 aaKnown RBP9.09□□□□□ -0.95
TRIM28-215ENST00000601150 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
TRIM28-215ENST00000601150 Q96NJ1 140 aa9.07□□□□□ -0.96
TRIM28-215ENST00000601150 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
TRIM28-215ENST00000601150 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
TRIM28-215ENST00000601150 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
TRIM28-215ENST00000601150 C9orf118A6NHY6 69 aa9.03□□□□□ -0.96
TRIM28-215ENST00000601150 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
TRIM28-215ENST00000601150 C9JAW5 83 aa9.02□□□□□ -0.97
TRIM28-215ENST00000601150 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
TRIM28-215ENST00000601150 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
TRIM28-215ENST00000601150 TAX1BP3O14907 124 aa9.01□□□□□ -0.97
TRIM28-215ENST00000601150 IGKV4-1P06312 121 aa8.99□□□□□ -0.97
TRIM28-215ENST00000601150 A0A1W2PPM0 123 aa8.98□□□□□ -0.97
TRIM28-215ENST00000601150 C21orf62-AS1Q17RA5 79 aa8.98□□□□□ -0.97
TRIM28-215ENST00000601150 Q75L30 129 aa8.98□□□□□ -0.97
TRIM28-215ENST00000601150 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
TRIM28-215ENST00000601150 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
TRIM28-215ENST00000601150 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
TRIM28-215ENST00000601150 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
TRIM28-215ENST00000601150 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
TRIM28-215ENST00000601150 Q6ZQT0 140 aa8.95□□□□□ -0.98
TRIM28-215ENST00000601150 PDE6GP18545 87 aa8.94□□□□□ -0.98
TRIM28-215ENST00000601150 DSCR10P59022 87 aa8.94□□□□□ -0.98
TRIM28-215ENST00000601150 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
TRIM28-215ENST00000601150 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
TRIM28-215ENST00000601150 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
TRIM28-215ENST00000601150 A0A1B0GW54 56 aa8.91□□□□□ -0.98
TRIM28-215ENST00000601150 H3BT86 120 aa8.91□□□□□ -0.98
TRIM28-215ENST00000601150 LINC00313P59037 77 aa8.91□□□□□ -0.98
TRIM28-215ENST00000601150 A8MUU9 505 aa8.9□□□□□ -0.98
TRIM28-215ENST00000601150 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
TRIM28-215ENST00000601150 J3KT08 172 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms