RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
SCAF1-203ENST00000598359 CBY1Q9Y3M2 126 aa8.05□□□□□ -1.12
SCAF1-203ENST00000598359 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
SCAF1-203ENST00000598359 DNAL4O96015 105 aa8.04□□□□□ -1.12
SCAF1-203ENST00000598359 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
SCAF1-203ENST00000598359 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
SCAF1-203ENST00000598359 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
SCAF1-203ENST00000598359 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
SCAF1-203ENST00000598359 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
SCAF1-203ENST00000598359 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
SCAF1-203ENST00000598359 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
SCAF1-203ENST00000598359 LINC00575Q6W349 94 aa8.01□□□□□ -1.13
SCAF1-203ENST00000598359 C3orf22Q8N5N4 141 aa8□□□□□ -1.13
SCAF1-203ENST00000598359 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
SCAF1-203ENST00000598359 FAM240AA0A1B0GVK7 77 aa7.99□□□□□ -1.13
SCAF1-203ENST00000598359 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
SCAF1-203ENST00000598359 SNCGO76070 127 aa7.99□□□□□ -1.13
SCAF1-203ENST00000598359 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
SCAF1-203ENST00000598359 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
SCAF1-203ENST00000598359 ORMDL1Q9P0S3 153 aa7.99□□□□□ -1.13
SCAF1-203ENST00000598359 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
SCAF1-203ENST00000598359 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
SCAF1-203ENST00000598359 A0A0U1RQV1 116 aa7.97□□□□□ -1.13
SCAF1-203ENST00000598359 PRYO14603 147 aa7.97□□□□□ -1.13
SCAF1-203ENST00000598359 SPRR4Q96PI1 79 aa7.97□□□□□ -1.13
SCAF1-203ENST00000598359 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
SCAF1-203ENST00000598359 hADV29S1A0JD25 119 aa7.96□□□□□ -1.14
SCAF1-203ENST00000598359 H3BQ85 93 aa7.96□□□□□ -1.14
SCAF1-203ENST00000598359 COX7BP24311 80 aa7.96□□□□□ -1.14
SCAF1-203ENST00000598359 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
SCAF1-203ENST00000598359 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
SCAF1-203ENST00000598359 SPRR1AP35321 89 aa7.95□□□□□ -1.14
SCAF1-203ENST00000598359 TMEM256-PLSCR3K7ERE1 68 aa7.94□□□□□ -1.14
SCAF1-203ENST00000598359 SMCR5Q8TEV8 140 aa7.94□□□□□ -1.14
SCAF1-203ENST00000598359 ACYP1P07311 99 aa7.93□□□□□ -1.14
SCAF1-203ENST00000598359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.93□□□□□ -1.14
SCAF1-203ENST00000598359 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
SCAF1-203ENST00000598359 SIGMAR1Q99720 223 aa7.92□□□□□ -1.14
SCAF1-203ENST00000598359 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
SCAF1-203ENST00000598359 ZNF706Q9Y5V0 76 aaPredicted RBP7.91□□□□□ -1.14
SCAF1-203ENST00000598359 B5MCH6 92 aa7.9□□□□□ -1.14
SCAF1-203ENST00000598359 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
SCAF1-203ENST00000598359 GHRHP01286 108 aa7.9□□□□□ -1.14
SCAF1-203ENST00000598359 Q6ZQY7 126 aa7.89□□□□□ -1.15
SCAF1-203ENST00000598359 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
SCAF1-203ENST00000598359 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
SCAF1-203ENST00000598359 Q8NBF4 154 aa7.88□□□□□ -1.15
SCAF1-203ENST00000598359 Q9BRP9 147 aa7.88□□□□□ -1.15
SCAF1-203ENST00000598359 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
SCAF1-203ENST00000598359 Q6ZRX8 168 aa7.86□□□□□ -1.15
SCAF1-203ENST00000598359 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
SCAF1-203ENST00000598359 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
SCAF1-203ENST00000598359 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
SCAF1-203ENST00000598359 IGLV9-49A0A0B4J1Y8 123 aa7.84□□□□□ -1.15
SCAF1-203ENST00000598359 MT-ATP8P03928 68 aa7.84□□□□□ -1.15
SCAF1-203ENST00000598359 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
SCAF1-203ENST00000598359 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
SCAF1-203ENST00000598359 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
SCAF1-203ENST00000598359 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
SCAF1-203ENST00000598359 CCKP06307 115 aa7.83□□□□□ -1.16
SCAF1-203ENST00000598359 MOBPQ13875 183 aa7.83□□□□□ -1.16
SCAF1-203ENST00000598359 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
SCAF1-203ENST00000598359 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
SCAF1-203ENST00000598359 TPRXLQ17RH7 258 aa7.82□□□□□ -1.16
SCAF1-203ENST00000598359 Q6Q795 121 aa7.81□□□□□ -1.16
SCAF1-203ENST00000598359 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
SCAF1-203ENST00000598359 PDE6GP18545 87 aa7.8□□□□□ -1.16
SCAF1-203ENST00000598359 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
SCAF1-203ENST00000598359 LINC00643Q86TS7 51 aa7.8□□□□□ -1.16
SCAF1-203ENST00000598359 TRBV7-4A0A0J9YYF1 115 aa7.79□□□□□ -1.16
SCAF1-203ENST00000598359 PCP4P48539 62 aa7.79□□□□□ -1.16
SCAF1-203ENST00000598359 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
SCAF1-203ENST00000598359 Q6ZQT0 140 aa7.79□□□□□ -1.16
SCAF1-203ENST00000598359 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
SCAF1-203ENST00000598359 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
SCAF1-203ENST00000598359 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
SCAF1-203ENST00000598359 NDUFV3P56181 108 aaKnown RBP7.78□□□□□ -1.16
SCAF1-203ENST00000598359 SPINK1P00995 79 aa7.77□□□□□ -1.17
SCAF1-203ENST00000598359 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
SCAF1-203ENST00000598359 Q8N377 158 aa7.76□□□□□ -1.17
SCAF1-203ENST00000598359 LINC00846Q9NV44 126 aa7.76□□□□□ -1.17
SCAF1-203ENST00000598359 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
SCAF1-203ENST00000598359 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
SCAF1-203ENST00000598359 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
SCAF1-203ENST00000598359 IMUPQ9GZP8 106 aa7.75□□□□□ -1.17
SCAF1-203ENST00000598359 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SCAF1-203ENST00000598359 Q6JHZ5 121 aa7.74□□□□□ -1.17
SCAF1-203ENST00000598359 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
SCAF1-203ENST00000598359 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
SCAF1-203ENST00000598359 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
SCAF1-203ENST00000598359 SPRR1BP22528 89 aa7.68□□□□□ -1.18
SCAF1-203ENST00000598359 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
SCAF1-203ENST00000598359 HRCT1Q6UXD1 115 aa7.68□□□□□ -1.18
SCAF1-203ENST00000598359 A0A1B0GW54 56 aa7.67□□□□□ -1.18
SCAF1-203ENST00000598359 SMIM29Q86T20 159 aa7.67□□□□□ -1.18
SCAF1-203ENST00000598359 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
SCAF1-203ENST00000598359 UBL5Q9BZL1 73 aa7.67□□□□□ -1.18
SCAF1-203ENST00000598359 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
SCAF1-203ENST00000598359 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.18
SCAF1-203ENST00000598359 Q6ZVQ6 151 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 508.6 ms