RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SMIM29Q86T20 159 aa11.31□□□□□ -0.6
SHKBP1-214ENST00000597396 TRIAP1O43715 76 aa11.3□□□□□ -0.6
SHKBP1-214ENST00000597396 M0R143 59 aa11.29□□□□□ -0.6
SHKBP1-214ENST00000597396 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
SHKBP1-214ENST00000597396 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
SHKBP1-214ENST00000597396 F8WEM9 126 aa11.27□□□□□ -0.61
SHKBP1-214ENST00000597396 COX6CP09669 75 aa11.26□□□□□ -0.61
SHKBP1-214ENST00000597396 A0A1B0GX51 115 aa11.25□□□□□ -0.61
SHKBP1-214ENST00000597396 PPDPFLQ8WWR9 84 aa11.25□□□□□ -0.61
SHKBP1-214ENST00000597396 RPS29P62273 56 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-214ENST00000597396 OCIAD2Q56VL3 154 aa11.24□□□□□ -0.61
SHKBP1-214ENST00000597396 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
SHKBP1-214ENST00000597396 CLEC2BQ92478 149 aa11.23□□□□□ -0.61
SHKBP1-214ENST00000597396 SNHG12Q9BXW3 62 aa11.22□□□□□ -0.61
SHKBP1-214ENST00000597396 RNF213Q63HN8 5207 aa11.22□□□□□ -0.61
SHKBP1-214ENST00000597396 GHRHP01286 108 aa11.19□□□□□ -0.62
SHKBP1-214ENST00000597396 DNAL4O96015 105 aa11.18□□□□□ -0.62
SHKBP1-214ENST00000597396 SCGB1C2P0DMR2 95 aa11.18□□□□□ -0.62
SHKBP1-214ENST00000597396 CD164Q04900 197 aa11.18□□□□□ -0.62
SHKBP1-214ENST00000597396 LIMD2Q9BT23 127 aa11.17□□□□□ -0.62
SHKBP1-214ENST00000597396 IGLV7-46A0A075B6I9 117 aa11.16□□□□□ -0.62
SHKBP1-214ENST00000597396 A0A0G2JQZ4 141 aa11.16□□□□□ -0.62
SHKBP1-214ENST00000597396 BATFQ16520 125 aa11.15□□□□□ -0.62
SHKBP1-214ENST00000597396 Q6JHZ5 121 aa11.15□□□□□ -0.62
SHKBP1-214ENST00000597396 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-214ENST00000597396 IGLV8-61A0A075B6I0 122 aa11.14□□□□□ -0.63
SHKBP1-214ENST00000597396 FABP2P12104 132 aa11.13□□□□□ -0.63
SHKBP1-214ENST00000597396 NDUFV3P56181 108 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-214ENST00000597396 ORMDL1Q9P0S3 153 aa11.12□□□□□ -0.63
SHKBP1-214ENST00000597396 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
SHKBP1-214ENST00000597396 H3BUT2 72 aa11.1□□□□□ -0.63
SHKBP1-214ENST00000597396 LPAP08519 4548 aa11.1□□□□□ -0.63
SHKBP1-214ENST00000597396 H3BQ85 93 aa11.09□□□□□ -0.63
SHKBP1-214ENST00000597396 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-214ENST00000597396 LST1O00453 97 aa11.08□□□□□ -0.64
SHKBP1-214ENST00000597396 TRACP01848 142 aa11.08□□□□□ -0.64
SHKBP1-214ENST00000597396 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
SHKBP1-214ENST00000597396 H3BMG7 143 aa11.05□□□□□ -0.64
SHKBP1-214ENST00000597396 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
SHKBP1-214ENST00000597396 Q5XG85 94 aa11.04□□□□□ -0.64
SHKBP1-214ENST00000597396 TCL1BO95988 128 aa11.03□□□□□ -0.64
SHKBP1-214ENST00000597396 CDIP1Q9H305 208 aa11.03□□□□□ -0.64
SHKBP1-214ENST00000597396 TRBV7-7A0A0K0K1E9 115 aa11.02□□□□□ -0.65
SHKBP1-214ENST00000597396 LYRM7Q5U5X0 104 aa11.02□□□□□ -0.65
SHKBP1-214ENST00000597396 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
SHKBP1-214ENST00000597396 A0A1B0GV72 72 aa10.99□□□□□ -0.65
SHKBP1-214ENST00000597396 UBE2V1Q13404 147 aa10.98□□□□□ -0.65
SHKBP1-214ENST00000597396 KRTAP13-3Q3SY46 172 aa10.98□□□□□ -0.65
SHKBP1-214ENST00000597396 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.65
SHKBP1-214ENST00000597396 C1orf195Q5TG92 126 aa10.96□□□□□ -0.65
SHKBP1-214ENST00000597396 TEN1Q86WV5 123 aa10.96□□□□□ -0.65
SHKBP1-214ENST00000597396 C9orf118A6NHY6 69 aa10.95□□□□□ -0.66
SHKBP1-214ENST00000597396 TAX1BP3O14907 124 aa10.94□□□□□ -0.66
SHKBP1-214ENST00000597396 Q6Q795 121 aa10.94□□□□□ -0.66
SHKBP1-214ENST00000597396 ANKRD29Q8N6D5 301 aa10.94□□□□□ -0.66
SHKBP1-214ENST00000597396 TRBV20-1A0A075B6N2 111 aa10.92□□□□□ -0.66
SHKBP1-214ENST00000597396 ASB16-AS1Q495Z4 193 aa10.92□□□□□ -0.66
SHKBP1-214ENST00000597396 SS18L2Q9UHA2 77 aa10.91□□□□□ -0.66
SHKBP1-214ENST00000597396 A0A087WSZ3 146 aa10.88□□□□□ -0.67
SHKBP1-214ENST00000597396 A0A1W2PNM2 257 aa10.88□□□□□ -0.67
SHKBP1-214ENST00000597396 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
SHKBP1-214ENST00000597396 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-214ENST00000597396 PCP4L1A6NKN8 68 aa10.86□□□□□ -0.67
SHKBP1-214ENST00000597396 C9JAW5 83 aa10.86□□□□□ -0.67
SHKBP1-214ENST00000597396 CCKP06307 115 aa10.85□□□□□ -0.67
SHKBP1-214ENST00000597396 COL5A1-AS1Q5SY13 56 aa10.85□□□□□ -0.67
SHKBP1-214ENST00000597396 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
SHKBP1-214ENST00000597396 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
SHKBP1-214ENST00000597396 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
SHKBP1-214ENST00000597396 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
SHKBP1-214ENST00000597396 JMJD7-PLA2G4BH0Y9G9 81 aa10.8□□□□□ -0.68
SHKBP1-214ENST00000597396 XP32Q5T750 250 aa10.8□□□□□ -0.68
SHKBP1-214ENST00000597396 MUC2Q02817 5179 aa10.79□□□□□ -0.68
SHKBP1-214ENST00000597396 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
SHKBP1-214ENST00000597396 SPCS1Q9Y6A9 102 aa10.78□□□□□ -0.68
SHKBP1-214ENST00000597396 H3BT86 120 aa10.75□□□□□ -0.69
SHKBP1-214ENST00000597396 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
SHKBP1-214ENST00000597396 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-214ENST00000597396 Q96NJ1 140 aa10.73□□□□□ -0.69
SHKBP1-214ENST00000597396 MUC17Q685J3 4493 aa10.72□□□□□ -0.69
SHKBP1-214ENST00000597396 Q6ZQT0 140 aa10.71□□□□□ -0.69
SHKBP1-214ENST00000597396 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
SHKBP1-214ENST00000597396 LOC110117498A0A087WWA1 95 aa10.7□□□□□ -0.7
SHKBP1-214ENST00000597396 PDE6GP18545 87 aa10.7□□□□□ -0.7
SHKBP1-214ENST00000597396 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
SHKBP1-214ENST00000597396 SIGMAR1Q99720 223 aa10.7□□□□□ -0.7
SHKBP1-214ENST00000597396 OBSCN-AS1Q96MR7 158 aa10.68□□□□□ -0.7
SHKBP1-214ENST00000597396 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
SHKBP1-214ENST00000597396 K7EP34 96 aa10.65□□□□□ -0.7
SHKBP1-214ENST00000597396 DEFB116Q30KQ4 102 aa10.64□□□□□ -0.71
SHKBP1-214ENST00000597396 LINC00472Q9H8W2 130 aa10.64□□□□□ -0.71
SHKBP1-214ENST00000597396 A0A1B0GW54 56 aa10.62□□□□□ -0.71
SHKBP1-214ENST00000597396 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-214ENST00000597396 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
SHKBP1-214ENST00000597396 GTF2H5Q6ZYL4 71 aa10.59□□□□□ -0.71
SHKBP1-214ENST00000597396 SMCPP49901 116 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-214ENST00000597396 DSCR10P59022 87 aa10.57□□□□□ -0.72
SHKBP1-214ENST00000597396 PRO0461Q9UI25 63 aa10.56□□□□□ -0.72
SHKBP1-214ENST00000597396 J3KT08 172 aa10.55□□□□□ -0.72
SHKBP1-214ENST00000597396 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms