RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 Q6ZQY7 126 aa9.84□□□□□ -0.83
SHKBP1-212ENST00000596163 CD164Q04900 197 aa9.83□□□□□ -0.84
SHKBP1-212ENST00000596163 PPDPFLQ8WWR9 84 aa9.82□□□□□ -0.84
SHKBP1-212ENST00000596163 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
SHKBP1-212ENST00000596163 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
SHKBP1-212ENST00000596163 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
SHKBP1-212ENST00000596163 LPAP08519 4548 aa9.79□□□□□ -0.84
SHKBP1-212ENST00000596163 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
SHKBP1-212ENST00000596163 A0A1B0GX51 115 aa9.78□□□□□ -0.84
SHKBP1-212ENST00000596163 GHRHP01286 108 aa9.78□□□□□ -0.84
SHKBP1-212ENST00000596163 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
SHKBP1-212ENST00000596163 SMIM6P0DI80 62 aa9.77□□□□□ -0.85
SHKBP1-212ENST00000596163 CDIP1Q9H305 208 aa9.77□□□□□ -0.85
SHKBP1-212ENST00000596163 PSMB2P49721 201 aa9.75□□□□□ -0.85
SHKBP1-212ENST00000596163 Q6JHZ5 121 aa9.75□□□□□ -0.85
SHKBP1-212ENST00000596163 COX6CP09669 75 aa9.74□□□□□ -0.85
SHKBP1-212ENST00000596163 TRIAP1O43715 76 aa9.73□□□□□ -0.85
SHKBP1-212ENST00000596163 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
SHKBP1-212ENST00000596163 K7ERJ3 54 aa9.72□□□□□ -0.85
SHKBP1-212ENST00000596163 FAM218AQ96MZ4 157 aa9.72□□□□□ -0.85
SHKBP1-212ENST00000596163 Q5XG85 94 aa9.71□□□□□ -0.86
SHKBP1-212ENST00000596163 RNF213Q63HN8 5207 aa9.71□□□□□ -0.86
SHKBP1-212ENST00000596163 H3BQ85 93 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 M0R143 59 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 TCL1BO95988 128 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 DNAL4O96015 105 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 CLEC2BQ92478 149 aa9.68□□□□□ -0.86
SHKBP1-212ENST00000596163 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
SHKBP1-212ENST00000596163 FABP2P12104 132 aa9.65□□□□□ -0.86
SHKBP1-212ENST00000596163 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-212ENST00000596163 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
SHKBP1-212ENST00000596163 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
SHKBP1-212ENST00000596163 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
SHKBP1-212ENST00000596163 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
SHKBP1-212ENST00000596163 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
SHKBP1-212ENST00000596163 H3BUT2 72 aa9.62□□□□□ -0.87
SHKBP1-212ENST00000596163 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
SHKBP1-212ENST00000596163 H3BMG7 143 aa9.6□□□□□ -0.87
SHKBP1-212ENST00000596163 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
SHKBP1-212ENST00000596163 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
SHKBP1-212ENST00000596163 TRACP01848 142 aa9.58□□□□□ -0.88
SHKBP1-212ENST00000596163 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
SHKBP1-212ENST00000596163 Q6Q795 121 aa9.57□□□□□ -0.88
SHKBP1-212ENST00000596163 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
SHKBP1-212ENST00000596163 LST1O00453 97 aa9.55□□□□□ -0.88
SHKBP1-212ENST00000596163 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-212ENST00000596163 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
SHKBP1-212ENST00000596163 UBE2V1Q13404 147 aa9.52□□□□□ -0.89
SHKBP1-212ENST00000596163 XP32Q5T750 250 aa9.52□□□□□ -0.89
SHKBP1-212ENST00000596163 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
SHKBP1-212ENST00000596163 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
SHKBP1-212ENST00000596163 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
SHKBP1-212ENST00000596163 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
SHKBP1-212ENST00000596163 ATXN8Q156A1 80 aa9.48□□□□□ -0.89
SHKBP1-212ENST00000596163 BATFQ16520 125 aa9.48□□□□□ -0.89
SHKBP1-212ENST00000596163 LYRM7Q5U5X0 104 aa9.48□□□□□ -0.89
SHKBP1-212ENST00000596163 BAALC-AS2P0C853 105 aa9.46□□□□□ -0.9
SHKBP1-212ENST00000596163 A0A087WSZ3 146 aa9.45□□□□□ -0.9
SHKBP1-212ENST00000596163 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-212ENST00000596163 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
SHKBP1-212ENST00000596163 A0A1B0GV72 72 aa9.44□□□□□ -0.9
SHKBP1-212ENST00000596163 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
SHKBP1-212ENST00000596163 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-212ENST00000596163 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
SHKBP1-212ENST00000596163 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
SHKBP1-212ENST00000596163 CCKP06307 115 aa9.4□□□□□ -0.9
SHKBP1-212ENST00000596163 MUC2Q02817 5179 aa9.37□□□□□ -0.91
SHKBP1-212ENST00000596163 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
SHKBP1-212ENST00000596163 JMJD7-PLA2G4BH0Y9G9 81 aa9.37□□□□□ -0.91
SHKBP1-212ENST00000596163 C9JAW5 83 aa9.36□□□□□ -0.91
SHKBP1-212ENST00000596163 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
SHKBP1-212ENST00000596163 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
SHKBP1-212ENST00000596163 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
SHKBP1-212ENST00000596163 RPL37P61927 97 aaKnown RBP9.33□□□□□ -0.92
SHKBP1-212ENST00000596163 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
SHKBP1-212ENST00000596163 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
SHKBP1-212ENST00000596163 Q96NJ1 140 aa9.32□□□□□ -0.92
SHKBP1-212ENST00000596163 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
SHKBP1-212ENST00000596163 PDE6GP18545 87 aa9.3□□□□□ -0.92
SHKBP1-212ENST00000596163 SIGMAR1Q99720 223 aa9.3□□□□□ -0.92
SHKBP1-212ENST00000596163 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
SHKBP1-212ENST00000596163 A0A1B0GW54 56 aa9.27□□□□□ -0.93
SHKBP1-212ENST00000596163 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
SHKBP1-212ENST00000596163 LOC110117498A0A087WWA1 95 aa9.26□□□□□ -0.93
SHKBP1-212ENST00000596163 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
SHKBP1-212ENST00000596163 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
SHKBP1-212ENST00000596163 Q75L30 129 aa9.25□□□□□ -0.93
SHKBP1-212ENST00000596163 H3BT86 120 aa9.24□□□□□ -0.93
SHKBP1-212ENST00000596163 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
SHKBP1-212ENST00000596163 Q6ZQT0 140 aa9.24□□□□□ -0.93
SHKBP1-212ENST00000596163 LINC00313P59037 77 aa9.22□□□□□ -0.93
SHKBP1-212ENST00000596163 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
SHKBP1-212ENST00000596163 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
SHKBP1-212ENST00000596163 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
SHKBP1-212ENST00000596163 J3KT08 172 aa9.2□□□□□ -0.94
SHKBP1-212ENST00000596163 DSCR10P59022 87 aa9.2□□□□□ -0.94
SHKBP1-212ENST00000596163 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
SHKBP1-212ENST00000596163 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
SHKBP1-212ENST00000596163 A8MUU9 505 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms