RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
SHKBP1-203ENST00000594298 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
SHKBP1-203ENST00000594298 HSD52Q0P140 79 aa9.89□□□□□ -0.83
SHKBP1-203ENST00000594298 Q1RN00 199 aa9.89□□□□□ -0.83
SHKBP1-203ENST00000594298 LINC01547P58512 204 aaPredicted RBP9.88□□□□□ -0.83
SHKBP1-203ENST00000594298 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
SHKBP1-203ENST00000594298 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
SHKBP1-203ENST00000594298 H0YGX0 51 aa9.87□□□□□ -0.83
SHKBP1-203ENST00000594298 Q8N377 158 aa9.86□□□□□ -0.83
SHKBP1-203ENST00000594298 FXYD2P54710 66 aa9.85□□□□□ -0.83
SHKBP1-203ENST00000594298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-203ENST00000594298 SMIM29Q86T20 159 aa9.85□□□□□ -0.83
SHKBP1-203ENST00000594298 F8WEM9 126 aa9.84□□□□□ -0.83
SHKBP1-203ENST00000594298 Q6ZQY7 126 aa9.84□□□□□ -0.83
SHKBP1-203ENST00000594298 CD164Q04900 197 aa9.83□□□□□ -0.84
SHKBP1-203ENST00000594298 PPDPFLQ8WWR9 84 aa9.82□□□□□ -0.84
SHKBP1-203ENST00000594298 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
SHKBP1-203ENST00000594298 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-203ENST00000594298 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
SHKBP1-203ENST00000594298 KRTAP4-1Q9BYQ7 146 aa9.8□□□□□ -0.84
SHKBP1-203ENST00000594298 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
SHKBP1-203ENST00000594298 A0A1B0GX51 115 aa9.78□□□□□ -0.84
SHKBP1-203ENST00000594298 GHRHP01286 108 aa9.78□□□□□ -0.84
SHKBP1-203ENST00000594298 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
SHKBP1-203ENST00000594298 SMIM6P0DI80 62 aa9.77□□□□□ -0.85
SHKBP1-203ENST00000594298 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-203ENST00000594298 PSMB2P49721 201 aa9.75□□□□□ -0.85
SHKBP1-203ENST00000594298 Q6JHZ5 121 aa9.75□□□□□ -0.85
SHKBP1-203ENST00000594298 COX6CP09669 75 aa9.74□□□□□ -0.85
SHKBP1-203ENST00000594298 TRIAP1O43715 76 aa9.73□□□□□ -0.85
SHKBP1-203ENST00000594298 XP32Q5T750 250 aa9.73□□□□□ -0.85
SHKBP1-203ENST00000594298 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
SHKBP1-203ENST00000594298 K7ERJ3 54 aa9.72□□□□□ -0.85
SHKBP1-203ENST00000594298 FAM218AQ96MZ4 157 aa9.72□□□□□ -0.85
SHKBP1-203ENST00000594298 Q5XG85 94 aa9.71□□□□□ -0.86
SHKBP1-203ENST00000594298 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 H3BQ85 93 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 M0R143 59 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 TCL1BO95988 128 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 DNAL4O96015 105 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 CLEC2BQ92478 149 aa9.68□□□□□ -0.86
SHKBP1-203ENST00000594298 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
SHKBP1-203ENST00000594298 FABP2P12104 132 aa9.65□□□□□ -0.86
SHKBP1-203ENST00000594298 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-203ENST00000594298 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
SHKBP1-203ENST00000594298 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
SHKBP1-203ENST00000594298 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
SHKBP1-203ENST00000594298 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
SHKBP1-203ENST00000594298 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
SHKBP1-203ENST00000594298 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
SHKBP1-203ENST00000594298 H3BUT2 72 aa9.62□□□□□ -0.87
SHKBP1-203ENST00000594298 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
SHKBP1-203ENST00000594298 H3BMG7 143 aa9.6□□□□□ -0.87
SHKBP1-203ENST00000594298 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
SHKBP1-203ENST00000594298 CRCT1Q9UGL9 99 aa9.6□□□□□ -0.87
SHKBP1-203ENST00000594298 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
SHKBP1-203ENST00000594298 KRTAP19-2Q3LHN2 52 aa9.59□□□□□ -0.87
SHKBP1-203ENST00000594298 TRACP01848 142 aa9.58□□□□□ -0.88
SHKBP1-203ENST00000594298 Q6Q795 121 aa9.57□□□□□ -0.88
SHKBP1-203ENST00000594298 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
SHKBP1-203ENST00000594298 LST1O00453 97 aa9.55□□□□□ -0.88
SHKBP1-203ENST00000594298 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
SHKBP1-203ENST00000594298 MT1HP80294 61 aa9.53□□□□□ -0.88
SHKBP1-203ENST00000594298 UBE2V1Q13404 147 aa9.52□□□□□ -0.89
SHKBP1-203ENST00000594298 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
SHKBP1-203ENST00000594298 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
SHKBP1-203ENST00000594298 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
SHKBP1-203ENST00000594298 ATXN8Q156A1 80 aa9.48□□□□□ -0.89
SHKBP1-203ENST00000594298 BATFQ16520 125 aa9.48□□□□□ -0.89
SHKBP1-203ENST00000594298 LYRM7Q5U5X0 104 aa9.48□□□□□ -0.89
SHKBP1-203ENST00000594298 BAALC-AS2P0C853 105 aa9.46□□□□□ -0.9
SHKBP1-203ENST00000594298 A0A087WSZ3 146 aa9.45□□□□□ -0.9
SHKBP1-203ENST00000594298 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-203ENST00000594298 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
SHKBP1-203ENST00000594298 A0A1B0GV72 72 aa9.44□□□□□ -0.9
SHKBP1-203ENST00000594298 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
SHKBP1-203ENST00000594298 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-203ENST00000594298 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-203ENST00000594298 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
SHKBP1-203ENST00000594298 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
SHKBP1-203ENST00000594298 CCKP06307 115 aa9.4□□□□□ -0.9
SHKBP1-203ENST00000594298 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-203ENST00000594298 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
SHKBP1-203ENST00000594298 JMJD7-PLA2G4BH0Y9G9 81 aa9.37□□□□□ -0.91
SHKBP1-203ENST00000594298 C9JAW5 83 aa9.36□□□□□ -0.91
SHKBP1-203ENST00000594298 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
SHKBP1-203ENST00000594298 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-203ENST00000594298 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
SHKBP1-203ENST00000594298 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
SHKBP1-203ENST00000594298 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
SHKBP1-203ENST00000594298 Q96NJ1 140 aa9.32□□□□□ -0.92
SHKBP1-203ENST00000594298 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
SHKBP1-203ENST00000594298 PDE6GP18545 87 aa9.3□□□□□ -0.92
SHKBP1-203ENST00000594298 SIGMAR1Q99720 223 aa9.3□□□□□ -0.92
SHKBP1-203ENST00000594298 M0R2T5 61 aa9.29□□□□□ -0.92
SHKBP1-203ENST00000594298 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
SHKBP1-203ENST00000594298 A0A1B0GW54 56 aa9.27□□□□□ -0.93
SHKBP1-203ENST00000594298 LOC110117498A0A087WWA1 95 aa9.26□□□□□ -0.93
SHKBP1-203ENST00000594298 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
SHKBP1-203ENST00000594298 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms