RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 UBE2BP63146 152 aa5.83□□□□□ -1.48
VPS25-205ENST00000590339 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
VPS25-205ENST00000590339 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
VPS25-205ENST00000590339 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 PDE6GP18545 87 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 PRLHP81277 87 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 KRTAP13-1Q8IUC0 172 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 ST20-AS1Q8NBB2 130 aa5.82□□□□□ -1.48
VPS25-205ENST00000590339 LINC00643Q86TS7 51 aa5.81□□□□□ -1.48
VPS25-205ENST00000590339 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
VPS25-205ENST00000590339 FAT1Q14517 4588 aa5.81□□□□□ -1.48
VPS25-205ENST00000590339 TRBV7-7A0A0K0K1E9 115 aa5.8□□□□□ -1.48
VPS25-205ENST00000590339 BCE1O60756 84 aa5.8□□□□□ -1.48
VPS25-205ENST00000590339 Q6Q795 121 aa5.8□□□□□ -1.48
VPS25-205ENST00000590339 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
VPS25-205ENST00000590339 SPRR1BP22528 89 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 Q6JHZ5 121 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 Q6ZSA8 131 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 SCXQ7RTU7 201 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 SMIM29Q86T20 159 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 DEFB105AQ8NG35 78 aa5.78□□□□□ -1.48
VPS25-205ENST00000590339 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
VPS25-205ENST00000590339 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
VPS25-205ENST00000590339 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
VPS25-205ENST00000590339 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
VPS25-205ENST00000590339 UBE2AP49459 152 aa5.76□□□□□ -1.49
VPS25-205ENST00000590339 CIRBP-AS1Q8TBR5 109 aa5.76□□□□□ -1.49
VPS25-205ENST00000590339 IMUPQ9GZP8 106 aa5.76□□□□□ -1.49
VPS25-205ENST00000590339 ATP5EP2Q5VTU8 51 aa5.75□□□□□ -1.49
VPS25-205ENST00000590339 DPH3Q96FX2 82 aa5.75□□□□□ -1.49
VPS25-205ENST00000590339 PCP4P48539 62 aa5.74□□□□□ -1.49
VPS25-205ENST00000590339 PSORS1C2Q9UIG4 136 aa5.74□□□□□ -1.49
VPS25-205ENST00000590339 A0A1B0GW54 56 aa5.73□□□□□ -1.49
VPS25-205ENST00000590339 C1orf137Q5JT78 98 aa5.73□□□□□ -1.49
VPS25-205ENST00000590339 Q8NBF4 154 aa5.73□□□□□ -1.49
VPS25-205ENST00000590339 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
VPS25-205ENST00000590339 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
VPS25-205ENST00000590339 J3QL48 77 aa5.72□□□□□ -1.49
VPS25-205ENST00000590339 Q6ZVQ6 151 aa5.72□□□□□ -1.49
VPS25-205ENST00000590339 F8WEM9 126 aa5.71□□□□□ -1.5
VPS25-205ENST00000590339 LINC00483Q53H64 154 aa5.71□□□□□ -1.5
VPS25-205ENST00000590339 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
VPS25-205ENST00000590339 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
VPS25-205ENST00000590339 IGFL1Q6UW32 110 aa5.7□□□□□ -1.5
VPS25-205ENST00000590339 ZNF861PO60384 105 aa5.69□□□□□ -1.5
VPS25-205ENST00000590339 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
VPS25-205ENST00000590339 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
VPS25-205ENST00000590339 IGLV7-43P04211 117 aa5.68□□□□□ -1.5
VPS25-205ENST00000590339 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
VPS25-205ENST00000590339 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
VPS25-205ENST00000590339 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
VPS25-205ENST00000590339 CRYGAP11844 174 aa5.67□□□□□ -1.5
VPS25-205ENST00000590339 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
VPS25-205ENST00000590339 CXCL6P80162 114 aa5.67□□□□□ -1.5
VPS25-205ENST00000590339 HERC1Q15751 4861 aa5.67□□□□□ -1.5
VPS25-205ENST00000590339 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
VPS25-205ENST00000590339 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
VPS25-205ENST00000590339 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
VPS25-205ENST00000590339 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
VPS25-205ENST00000590339 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
VPS25-205ENST00000590339 A0A087WVE0 104 aa5.63□□□□□ -1.51
VPS25-205ENST00000590339 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
VPS25-205ENST00000590339 NREPQ16612 68 aa5.63□□□□□ -1.51
VPS25-205ENST00000590339 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
VPS25-205ENST00000590339 DMBT1Q9UGM3 2413 aaPredicted RBP5.61□□□□□ -1.51
VPS25-205ENST00000590339 OXTP01178 125 aa5.6□□□□□ -1.51
VPS25-205ENST00000590339 A0A087WSZ3 146 aa5.59□□□□□ -1.51
VPS25-205ENST00000590339 ATOX1O00244 68 aa5.59□□□□□ -1.51
VPS25-205ENST00000590339 BPY2O14599 106 aa5.59□□□□□ -1.51
VPS25-205ENST00000590339 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
VPS25-205ENST00000590339 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
VPS25-205ENST00000590339 C9orf153Q5TBE3 101 aa5.58□□□□□ -1.52
VPS25-205ENST00000590339 DSCR10P59022 87 aa5.57□□□□□ -1.52
VPS25-205ENST00000590339 MOBPQ13875 183 aa5.57□□□□□ -1.52
VPS25-205ENST00000590339 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
VPS25-205ENST00000590339 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
VPS25-205ENST00000590339 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
VPS25-205ENST00000590339 Q8N9L7 120 aa5.55□□□□□ -1.52
VPS25-205ENST00000590339 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
VPS25-205ENST00000590339 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
VPS25-205ENST00000590339 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 CCDC179H3BU77 68 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 K7EQZ3 153 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 CD164Q04900 197 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 Q96NJ1 140 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 SS18L2Q9UHA2 77 aa5.52□□□□□ -1.53
VPS25-205ENST00000590339 A0A087X002 238 aa5.51□□□□□ -1.53
VPS25-205ENST00000590339 COX7CP15954 63 aa5.51□□□□□ -1.53
VPS25-205ENST00000590339 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
VPS25-205ENST00000590339 UQCRQO14949 82 aa5.5□□□□□ -1.53
VPS25-205ENST00000590339 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
VPS25-205ENST00000590339 J3KT08 172 aa5.49□□□□□ -1.53
VPS25-205ENST00000590339 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
VPS25-205ENST00000590339 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
VPS25-205ENST00000590339 A8MWP4 228 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms