RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 Q8N377 158 aa9.1□□□□□ -0.95
DDX39A-211ENST00000590239 TMEM256-PLSCR3K7ERE1 68 aa9.08□□□□□ -0.96
DDX39A-211ENST00000590239 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
DDX39A-211ENST00000590239 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
DDX39A-211ENST00000590239 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
DDX39A-211ENST00000590239 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
DDX39A-211ENST00000590239 H3BT86 120 aa9.05□□□□□ -0.96
DDX39A-211ENST00000590239 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
DDX39A-211ENST00000590239 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
DDX39A-211ENST00000590239 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
DDX39A-211ENST00000590239 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
DDX39A-211ENST00000590239 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
DDX39A-211ENST00000590239 PRO0461Q9UI25 63 aa9.03□□□□□ -0.96
DDX39A-211ENST00000590239 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
DDX39A-211ENST00000590239 MTURNQ8N3F0 131 aa9.02□□□□□ -0.97
DDX39A-211ENST00000590239 ANKRD29Q8N6D5 301 aa9.02□□□□□ -0.97
DDX39A-211ENST00000590239 F8W1H4 67 aa9.01□□□□□ -0.97
DDX39A-211ENST00000590239 CRYGAP11844 174 aa9.01□□□□□ -0.97
DDX39A-211ENST00000590239 F8WEM9 126 aa9□□□□□ -0.97
DDX39A-211ENST00000590239 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
DDX39A-211ENST00000590239 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
DDX39A-211ENST00000590239 A0A087X002 238 aa8.98□□□□□ -0.97
DDX39A-211ENST00000590239 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
DDX39A-211ENST00000590239 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
DDX39A-211ENST00000590239 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
DDX39A-211ENST00000590239 JMJD7-PLA2G4BH0Y9G9 81 aa8.95□□□□□ -0.98
DDX39A-211ENST00000590239 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
DDX39A-211ENST00000590239 Q8NBF4 154 aa8.95□□□□□ -0.98
DDX39A-211ENST00000590239 MOBPQ13875 183 aa8.94□□□□□ -0.98
DDX39A-211ENST00000590239 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
DDX39A-211ENST00000590239 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
DDX39A-211ENST00000590239 OBSCN-AS1Q96MR7 158 aa8.94□□□□□ -0.98
DDX39A-211ENST00000590239 Q6JHZ5 121 aa8.93□□□□□ -0.98
DDX39A-211ENST00000590239 RBM3P98179 157 aaKnown RBP8.92□□□□□ -0.98
DDX39A-211ENST00000590239 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
DDX39A-211ENST00000590239 OXTP01178 125 aa8.91□□□□□ -0.98
DDX39A-211ENST00000590239 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-211ENST00000590239 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
DDX39A-211ENST00000590239 MYCBP2O75592 4640 aa8.9□□□□□ -0.99
DDX39A-211ENST00000590239 A0A1B0GV72 72 aa8.89□□□□□ -0.99
DDX39A-211ENST00000590239 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
DDX39A-211ENST00000590239 DSCR8Q96T75 97 aa8.89□□□□□ -0.99
DDX39A-211ENST00000590239 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
DDX39A-211ENST00000590239 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
DDX39A-211ENST00000590239 LOC110117498A0A087WWA1 95 aa8.87□□□□□ -0.99
DDX39A-211ENST00000590239 PDE6GP18545 87 aa8.87□□□□□ -0.99
DDX39A-211ENST00000590239 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
DDX39A-211ENST00000590239 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
DDX39A-211ENST00000590239 C21orf62-AS1Q17RA5 79 aa8.85□□□□□ -0.99
DDX39A-211ENST00000590239 C14orf132Q9NPU4 83 aa8.85□□□□□ -0.99
DDX39A-211ENST00000590239 CD164Q04900 197 aa8.84□□□□□ -0.99
DDX39A-211ENST00000590239 A0A0G2JQZ4 141 aa8.83□□□□□ -1
DDX39A-211ENST00000590239 MT1HL1P0DM35 61 aa8.83□□□□□ -1
DDX39A-211ENST00000590239 Q6ZQT0 140 aa8.83□□□□□ -1
DDX39A-211ENST00000590239 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
DDX39A-211ENST00000590239 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
DDX39A-211ENST00000590239 Q6Q795 121 aa8.82□□□□□ -1
DDX39A-211ENST00000590239 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
DDX39A-211ENST00000590239 HMCN2Q8NDA2 5059 aa8.82□□□□□ -1
DDX39A-211ENST00000590239 CCKP06307 115 aa8.81□□□□□ -1
DDX39A-211ENST00000590239 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
DDX39A-211ENST00000590239 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
DDX39A-211ENST00000590239 A0A1W2PNM2 257 aa8.8□□□□□ -1
DDX39A-211ENST00000590239 SPINK1P00995 79 aa8.78□□□□□ -1
DDX39A-211ENST00000590239 TRBV7-7A0A0K0K1E9 115 aa8.77□□□□□ -1.01
DDX39A-211ENST00000590239 A0A1B0GW54 56 aa8.77□□□□□ -1.01
DDX39A-211ENST00000590239 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
DDX39A-211ENST00000590239 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
DDX39A-211ENST00000590239 VPS25Q9BRG1 176 aa8.76□□□□□ -1.01
DDX39A-211ENST00000590239 TNXBP22105 4242 aa8.74□□□□□ -1.01
DDX39A-211ENST00000590239 J3QL48 77 aa8.73□□□□□ -1.01
DDX39A-211ENST00000590239 Q5XG85 94 aa8.72□□□□□ -1.01
DDX39A-211ENST00000590239 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
DDX39A-211ENST00000590239 A0A087WSZ3 146 aa8.7□□□□□ -1.02
DDX39A-211ENST00000590239 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
DDX39A-211ENST00000590239 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
DDX39A-211ENST00000590239 FAM240AA0A1B0GVK7 77 aa8.67□□□□□ -1.02
DDX39A-211ENST00000590239 J3QR89 54 aa8.67□□□□□ -1.02
DDX39A-211ENST00000590239 ACYP1P07311 99 aa8.66□□□□□ -1.02
DDX39A-211ENST00000590239 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
DDX39A-211ENST00000590239 NREPQ16612 68 aa8.61□□□□□ -1.03
DDX39A-211ENST00000590239 K7ERU9 68 aa8.6□□□□□ -1.03
DDX39A-211ENST00000590239 C1orf195Q5TG92 126 aa8.6□□□□□ -1.03
DDX39A-211ENST00000590239 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
DDX39A-211ENST00000590239 RNF213Q63HN8 5207 aa8.59□□□□□ -1.03
DDX39A-211ENST00000590239 Q6ZVQ6 151 aa8.59□□□□□ -1.03
DDX39A-211ENST00000590239 LINC00472Q9H8W2 130 aa8.59□□□□□ -1.03
DDX39A-211ENST00000590239 Q96NJ1 140 aa8.58□□□□□ -1.04
DDX39A-211ENST00000590239 J3KT08 172 aa8.55□□□□□ -1.04
DDX39A-211ENST00000590239 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-211ENST00000590239 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
DDX39A-211ENST00000590239 IGKV4-1P06312 121 aa8.52□□□□□ -1.05
DDX39A-211ENST00000590239 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
DDX39A-211ENST00000590239 BPY2O14599 106 aa8.51□□□□□ -1.05
DDX39A-211ENST00000590239 SIGMAR1Q99720 223 aa8.51□□□□□ -1.05
DDX39A-211ENST00000590239 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
DDX39A-211ENST00000590239 CXCL6P80162 114 aa8.47□□□□□ -1.05
DDX39A-211ENST00000590239 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
DDX39A-211ENST00000590239 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
DDX39A-211ENST00000590239 IGLV7-46A0A075B6I9 117 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms