RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 VAMP3Q15836 100 aa8.8□□□□□ -1
LINC01842-201ENST00000588275 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
LINC01842-201ENST00000588275 Q6ZQY7 126 aa8.79□□□□□ -1
LINC01842-201ENST00000588275 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
LINC01842-201ENST00000588275 TRBV7-7A0A0K0K1E9 115 aa8.78□□□□□ -1
LINC01842-201ENST00000588275 Q6JHZ5 121 aa8.78□□□□□ -1
LINC01842-201ENST00000588275 CLEC2BQ92478 149 aa8.78□□□□□ -1
LINC01842-201ENST00000588275 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
LINC01842-201ENST00000588275 LINC00575Q6W349 94 aa8.77□□□□□ -1.01
LINC01842-201ENST00000588275 hADV29S1A0JD25 119 aa8.76□□□□□ -1.01
LINC01842-201ENST00000588275 COA6Q5JTJ3 125 aaKnown RBP8.74□□□□□ -1.01
LINC01842-201ENST00000588275 Q75L30 129 aa8.73□□□□□ -1.01
LINC01842-201ENST00000588275 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
LINC01842-201ENST00000588275 Q96NJ1 140 aa8.7□□□□□ -1.02
LINC01842-201ENST00000588275 LST1O00453 97 aa8.69□□□□□ -1.02
LINC01842-201ENST00000588275 H3BUT2 72 aa8.68□□□□□ -1.02
LINC01842-201ENST00000588275 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
LINC01842-201ENST00000588275 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
LINC01842-201ENST00000588275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.67□□□□□ -1.02
LINC01842-201ENST00000588275 C12orf57Q99622 126 aa8.67□□□□□ -1.02
LINC01842-201ENST00000588275 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
LINC01842-201ENST00000588275 BVES-AS1Q5T3Y7 98 aa8.63□□□□□ -1.03
LINC01842-201ENST00000588275 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
LINC01842-201ENST00000588275 SS18L2Q9UHA2 77 aa8.62□□□□□ -1.03
LINC01842-201ENST00000588275 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
LINC01842-201ENST00000588275 CFC1P0CG37 223 aa8.61□□□□□ -1.03
LINC01842-201ENST00000588275 USH2AO75445 5202 aa8.6□□□□□ -1.03
LINC01842-201ENST00000588275 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
LINC01842-201ENST00000588275 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
LINC01842-201ENST00000588275 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
LINC01842-201ENST00000588275 SSPOA2VEC9 5147 aa8.58□□□□□ -1.04
LINC01842-201ENST00000588275 A8MUU9 505 aa8.57□□□□□ -1.04
LINC01842-201ENST00000588275 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
LINC01842-201ENST00000588275 S100A2P29034 98 aa8.57□□□□□ -1.04
LINC01842-201ENST00000588275 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
LINC01842-201ENST00000588275 KRTAP9-7A8MTY7 169 aa8.56□□□□□ -1.04
LINC01842-201ENST00000588275 A0A087WSZ3 146 aa8.55□□□□□ -1.04
LINC01842-201ENST00000588275 DSCR10P59022 87 aa8.55□□□□□ -1.04
LINC01842-201ENST00000588275 TEN1Q86WV5 123 aa8.55□□□□□ -1.04
LINC01842-201ENST00000588275 HIST1H2BLQ99880 126 aa8.55□□□□□ -1.04
LINC01842-201ENST00000588275 HIST3H2BBQ8N257 126 aa8.54□□□□□ -1.04
LINC01842-201ENST00000588275 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
LINC01842-201ENST00000588275 SNCGO76070 127 aa8.52□□□□□ -1.05
LINC01842-201ENST00000588275 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
LINC01842-201ENST00000588275 NDUFV3P56181 108 aaKnown RBP8.52□□□□□ -1.05
LINC01842-201ENST00000588275 SIGMAR1Q99720 223 aa8.52□□□□□ -1.05
LINC01842-201ENST00000588275 RAB37Q96AX2 223 aa8.51□□□□□ -1.05
LINC01842-201ENST00000588275 FAM218AQ96MZ4 157 aa8.49□□□□□ -1.05
LINC01842-201ENST00000588275 H3BMG7 143 aa8.47□□□□□ -1.05
LINC01842-201ENST00000588275 H0YGX0 51 aa8.46□□□□□ -1.06
LINC01842-201ENST00000588275 COX8AP10176 69 aa8.46□□□□□ -1.06
LINC01842-201ENST00000588275 FABP2P12104 132 aa8.46□□□□□ -1.06
LINC01842-201ENST00000588275 MT2AP02795 61 aa8.45□□□□□ -1.06
LINC01842-201ENST00000588275 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
LINC01842-201ENST00000588275 S100A6P06703 90 aa8.43□□□□□ -1.06
LINC01842-201ENST00000588275 LINC00313P59037 77 aa8.43□□□□□ -1.06
LINC01842-201ENST00000588275 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
LINC01842-201ENST00000588275 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
LINC01842-201ENST00000588275 IGKV4-1P06312 121 aa8.41□□□□□ -1.06
LINC01842-201ENST00000588275 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
LINC01842-201ENST00000588275 A0A1B0GV72 72 aa8.4□□□□□ -1.06
LINC01842-201ENST00000588275 GHRHP01286 108 aa8.4□□□□□ -1.06
LINC01842-201ENST00000588275 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
LINC01842-201ENST00000588275 FCGBPQ9Y6R7 5405 aaPredicted RBP8.4□□□□□ -1.07
LINC01842-201ENST00000588275 DLEU1O43261 78 aa8.39□□□□□ -1.07
LINC01842-201ENST00000588275 MT1FP04733 61 aa8.39□□□□□ -1.07
LINC01842-201ENST00000588275 KRTAP10-10P60014 251 aa8.37□□□□□ -1.07
LINC01842-201ENST00000588275 A0A1B0GX51 115 aa8.36□□□□□ -1.07
LINC01842-201ENST00000588275 HRES1P13985 223 aa8.36□□□□□ -1.07
LINC01842-201ENST00000588275 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
LINC01842-201ENST00000588275 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
LINC01842-201ENST00000588275 LCE2BO14633 110 aa8.35□□□□□ -1.07
LINC01842-201ENST00000588275 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
LINC01842-201ENST00000588275 ANKRD29Q8N6D5 301 aa8.35□□□□□ -1.07
LINC01842-201ENST00000588275 HIGD1BQ9P298 99 aa8.35□□□□□ -1.07
LINC01842-201ENST00000588275 PAM16Q9Y3D7 125 aa8.35□□□□□ -1.07
LINC01842-201ENST00000588275 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
LINC01842-201ENST00000588275 SPATA45Q537H7 98 aa8.33□□□□□ -1.08
LINC01842-201ENST00000588275 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
LINC01842-201ENST00000588275 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
LINC01842-201ENST00000588275 TRBV7-4A0A0J9YYF1 115 aa8.32□□□□□ -1.08
LINC01842-201ENST00000588275 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
LINC01842-201ENST00000588275 CEND1Q8N111 149 aa8.32□□□□□ -1.08
LINC01842-201ENST00000588275 TRIAP1O43715 76 aa8.31□□□□□ -1.08
LINC01842-201ENST00000588275 DNAL4O96015 105 aa8.31□□□□□ -1.08
LINC01842-201ENST00000588275 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
LINC01842-201ENST00000588275 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
LINC01842-201ENST00000588275 A6NJY4 79 aa8.3□□□□□ -1.08
LINC01842-201ENST00000588275 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
LINC01842-201ENST00000588275 TRACP01848 142 aa8.29□□□□□ -1.08
LINC01842-201ENST00000588275 CCKP06307 115 aa8.28□□□□□ -1.08
LINC01842-201ENST00000588275 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
LINC01842-201ENST00000588275 FXYD2P54710 66 aa8.27□□□□□ -1.09
LINC01842-201ENST00000588275 VAMP8Q9BV40 100 aa8.27□□□□□ -1.09
LINC01842-201ENST00000588275 S100A1P23297 94 aa8.26□□□□□ -1.09
LINC01842-201ENST00000588275 PSMB2P49721 201 aa8.25□□□□□ -1.09
LINC01842-201ENST00000588275 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
LINC01842-201ENST00000588275 VPS25Q9BRG1 176 aa8.24□□□□□ -1.09
LINC01842-201ENST00000588275 H3BQ85 93 aa8.23□□□□□ -1.09
LINC01842-201ENST00000588275 TMEM256-PLSCR3K7ERE1 68 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms