RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 CCDC18Q5T9S5 1454 aa-0.24□□□□□ -2.45
ZNF404-202ENST00000587539 ANKRD50Q9ULJ7 1429 aa-0.24□□□□□ -2.45
ZNF404-202ENST00000587539 A0A087WXM4 84 aa-0.24□□□□□ -2.45
ZNF404-202ENST00000587539 MRPL33O75394 65 aaKnown RBP-0.24□□□□□ -2.45
ZNF404-202ENST00000587539 WIZO95785 1651 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 ABCC1P33527 1531 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 PKD1P98161 4303 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 DOT1LQ8TEK3 1739 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 SMARCA2P51531 1590 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 ARFGEF2Q9Y6D5 1785 aa-0.25□□□□□ -2.45
ZNF404-202ENST00000587539 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 DCAF1Q9Y4B6 1507 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 H3BNG1 76 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 NDUFA4O00483 81 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 IFI6P09912 130 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 PKHD1L1Q86WI1 4243 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 DDX60LQ5H9U9 1706 aaKnown RBP-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 KDM5DQ9BY66 1539 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 CFAP43Q8NDM7 1665 aa-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.26□□□□□ -2.45
ZNF404-202ENST00000587539 NREPQ16612 68 aa-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 HFM1A2PYH4 1435 aa-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 DYNC1H1Q14204 4646 aaKnown RBP-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 DEFB121Q5J5C9 76 aa-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 COL6A5A8TX70 2615 aa-0.27□□□□□ -2.45
ZNF404-202ENST00000587539 DNAH2Q9P225 4427 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 LYNX1G3V0Z9 82 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 TDRG1Q3Y452 100 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 MED14O60244 1454 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 RALGAPBQ86X10 1494 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 MAP3K1Q13233 1512 aa-0.28□□□□□ -2.45
ZNF404-202ENST00000587539 DEFB131BA0A096LNP1 70 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 CFAP74Q9C0B2 1584 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 RIF1Q5UIP0 2472 aaKnown RBP-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 MUC17Q685J3 4493 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 USP9YO00507 2555 aaPredicted RBP-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 PLCH1Q4KWH8 1693 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 ZNF831Q5JPB2 1677 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 ANKARQ7Z5J8 1434 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 H3BUT2 72 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 SMIM13P0DJ93 91 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 PRLHP81277 87 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 UBL5Q9BZL1 73 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 TGP01266 2768 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 MXRA5Q9NR99 2828 aa-0.29□□□□□ -2.46
ZNF404-202ENST00000587539 VPS13DQ5THJ4 4388 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 FASNP49327 2511 aaKnown RBP-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 MT1AP04731 61 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 IAPPP10997 89 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 DEFA5Q01523 94 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 SPRR2FQ96RM1 72 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 ERVK-7P63135 1459 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 CMYA5Q8N3K9 4069 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 ITSN1Q15811 1721 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH5Q8TE73 4624 aa-0.3□□□□□ -2.46
ZNF404-202ENST00000587539 H0YAA0 97 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 MYO18BQ8IUG5 2567 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 USP9XQ93008 2570 aaPredicted RBP-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH7Q8WXX0 4024 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 ANK3Q12955 4377 aaKnown RBP-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 KNL1Q8NG31 2342 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 ARHGAP35Q9NRY4 1499 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 SCN11AQ9UI33 1791 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 KIAA0586Q9BVV6 1533 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
ZNF404-202ENST00000587539 BVES-AS1Q5T3Y7 98 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 SVEP1Q4LDE5 3571 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 PDE4DIPQ5VU43 2346 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 RICTORQ6R327 1708 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 NBPF19A0A087WUL8 3843 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
ZNF404-202ENST00000587539 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 SACSQ9NZJ4 4579 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 KCNQ1DNQ9H478 68 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH9Q9NYC9 4486 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 DEFB130BP0DP73 79 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 DEFB130AP0DP74 79 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 DEFB106AQ8N104 65 aa-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 RRBP1Q9P2E9 1410 aaKnown RBP-0.33□□□□□ -2.46
ZNF404-202ENST00000587539 ZC3H13Q5T200 1668 aaKnown RBP-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH17Q9UFH2 4485 aa-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 C18orf32Q8TCD1 76 aa-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 LMTK2Q8IWU2 1503 aa-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 DNAH3Q8TD57 4116 aa-0.34□□□□□ -2.46
ZNF404-202ENST00000587539 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 KRTAP19-6Q3LI70 58 aa-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 INO80Q9ULG1 1556 aaPredicted RBP-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 S4R3F8 94 aa-0.35□□□□□ -2.46
ZNF404-202ENST00000587539 NBASA2RRP1 2371 aa-0.35□□□□□ -2.47
ZNF404-202ENST00000587539 RNF17Q9BXT8 1623 aaKnown RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms