RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 HECTD1Q9ULT8 2610 aa7.85□□□□□ -1.15
RNF43-208ENST00000584437 FLNAP21333 2647 aaKnown RBP7.85□□□□□ -1.15
RNF43-208ENST00000584437 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
RNF43-208ENST00000584437 FLNBO75369 2602 aaKnown RBP7.83□□□□□ -1.16
RNF43-208ENST00000584437 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
RNF43-208ENST00000584437 ATRQ13535 2644 aa7.8□□□□□ -1.16
RNF43-208ENST00000584437 R4GN34 69 aa7.8□□□□□ -1.16
RNF43-208ENST00000584437 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
RNF43-208ENST00000584437 ITPR3Q14573 2671 aa7.77□□□□□ -1.17
RNF43-208ENST00000584437 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
RNF43-208ENST00000584437 MAST4O15021 2626 aa7.74□□□□□ -1.17
RNF43-208ENST00000584437 KRTAP1-5Q9BYS1 174 aa7.73□□□□□ -1.17
RNF43-208ENST00000584437 A6NN06 94 aa7.7□□□□□ -1.18
RNF43-208ENST00000584437 LCE6AA0A183 80 aa7.69□□□□□ -1.18
RNF43-208ENST00000584437 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
RNF43-208ENST00000584437 M0R2T5 61 aa7.66□□□□□ -1.18
RNF43-208ENST00000584437 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
RNF43-208ENST00000584437 AKAP13Q12802 2813 aa7.64□□□□□ -1.19
RNF43-208ENST00000584437 M0QZ58 72 aa7.64□□□□□ -1.19
RNF43-208ENST00000584437 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
RNF43-208ENST00000584437 NBEAL1Q6ZS30 2694 aa7.62□□□□□ -1.19
RNF43-208ENST00000584437 UTRNP46939 3433 aa7.62□□□□□ -1.19
RNF43-208ENST00000584437 DNAH12Q6ZR08 3092 aa7.61□□□□□ -1.19
RNF43-208ENST00000584437 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
RNF43-208ENST00000584437 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
RNF43-208ENST00000584437 PANO1I0J062 215 aa7.59□□□□□ -1.19
RNF43-208ENST00000584437 CHD6Q8TD26 2715 aa7.59□□□□□ -1.19
RNF43-208ENST00000584437 HELZ2Q9BYK8 2649 aaKnown RBP7.58□□□□□ -1.2
RNF43-208ENST00000584437 KRTAP10-1P60331 282 aa7.57□□□□□ -1.2
RNF43-208ENST00000584437 PCNTO95613 3336 aa7.56□□□□□ -1.2
RNF43-208ENST00000584437 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
RNF43-208ENST00000584437 ADM2Q7Z4H4 148 aa7.56□□□□□ -1.2
RNF43-208ENST00000584437 A0A087X002 238 aa7.55□□□□□ -1.2
RNF43-208ENST00000584437 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
RNF43-208ENST00000584437 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
RNF43-208ENST00000584437 CFAP46Q8IYW2 2715 aa7.53□□□□□ -1.2
RNF43-208ENST00000584437 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
RNF43-208ENST00000584437 GCN1Q92616 2671 aaKnown RBP7.5□□□□□ -1.21
RNF43-208ENST00000584437 CENPEQ02224 2701 aa7.5□□□□□ -1.21
RNF43-208ENST00000584437 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
RNF43-208ENST00000584437 Q5VSD8 79 aa7.49□□□□□ -1.21
RNF43-208ENST00000584437 CEP350Q5VT06 3117 aa7.46□□□□□ -1.21
RNF43-208ENST00000584437 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
RNF43-208ENST00000584437 A8MU10 97 aa7.44□□□□□ -1.22
RNF43-208ENST00000584437 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
RNF43-208ENST00000584437 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
RNF43-208ENST00000584437 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
RNF43-208ENST00000584437 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
RNF43-208ENST00000584437 CHD7Q9P2D1 2997 aa7.4□□□□□ -1.22
RNF43-208ENST00000584437 KRTAP13-1Q8IUC0 172 aa7.38□□□□□ -1.23
RNF43-208ENST00000584437 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
RNF43-208ENST00000584437 TEP1Q99973 2627 aaKnown RBP7.36□□□□□ -1.23
RNF43-208ENST00000584437 C5orf42Q9H799 3197 aa7.36□□□□□ -1.23
RNF43-208ENST00000584437 Q6ZRN7 208 aaPredicted RBP7.34□□□□□ -1.23
RNF43-208ENST00000584437 STAB2Q8WWQ8 2551 aa7.33□□□□□ -1.24
RNF43-208ENST00000584437 A8MUU9 505 aa7.33□□□□□ -1.24
RNF43-208ENST00000584437 CFAP54Q96N23 3096 aa7.31□□□□□ -1.24
RNF43-208ENST00000584437 NBEAL2Q6ZNJ1 2754 aa7.31□□□□□ -1.24
RNF43-208ENST00000584437 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
RNF43-208ENST00000584437 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
RNF43-208ENST00000584437 A0A0C4DFX4 3053 aa7.29□□□□□ -1.24
RNF43-208ENST00000584437 CHD9Q3L8U1 2897 aa7.29□□□□□ -1.24
RNF43-208ENST00000584437 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.24
RNF43-208ENST00000584437 MGAQ8IWI9 3026 aa7.24□□□□□ -1.25
RNF43-208ENST00000584437 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.25
RNF43-208ENST00000584437 ZNF292O60281 2723 aa7.21□□□□□ -1.26
RNF43-208ENST00000584437 TNP1P09430 55 aa7.16□□□□□ -1.26
RNF43-208ENST00000584437 NSD1Q96L73 2696 aaPredicted RBP7.15□□□□□ -1.26
RNF43-208ENST00000584437 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
RNF43-208ENST00000584437 TRANK1O15050 2925 aa7.13□□□□□ -1.27
RNF43-208ENST00000584437 BAHCC1Q9P281 2608 aa7.12□□□□□ -1.27
RNF43-208ENST00000584437 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
RNF43-208ENST00000584437 MAP1AP78559 2803 aaPredicted RBP7.1□□□□□ -1.27
RNF43-208ENST00000584437 BRCA2P51587 3418 aa7.1□□□□□ -1.27
RNF43-208ENST00000584437 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
RNF43-208ENST00000584437 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
RNF43-208ENST00000584437 FRYQ5TBA9 3013 aa7.02□□□□□ -1.29
RNF43-208ENST00000584437 H0YAA0 97 aa7.02□□□□□ -1.29
RNF43-208ENST00000584437 ITPR1Q14643 2758 aa7.01□□□□□ -1.29
RNF43-208ENST00000584437 IGSF10Q6WRI0 2623 aa7□□□□□ -1.29
RNF43-208ENST00000584437 HTTP42858 3142 aa7□□□□□ -1.29
RNF43-208ENST00000584437 ITPR2Q14571 2701 aa7□□□□□ -1.29
RNF43-208ENST00000584437 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
RNF43-208ENST00000584437 P0C880 135 aa6.98□□□□□ -1.29
RNF43-208ENST00000584437 APCP25054 2843 aa6.97□□□□□ -1.29
RNF43-208ENST00000584437 DSPP15924 2871 aaKnown RBP6.96□□□□□ -1.29
RNF43-208ENST00000584437 WDFY4Q6ZS81 3184 aa6.96□□□□□ -1.29
RNF43-208ENST00000584437 MKI67P46013 3256 aaKnown RBP6.95□□□□□ -1.3
RNF43-208ENST00000584437 KMT2BQ9UMN6 2715 aaPredicted RBP6.95□□□□□ -1.3
RNF43-208ENST00000584437 RANBP2P49792 3224 aaKnown RBP6.94□□□□□ -1.3
RNF43-208ENST00000584437 TRIOO75962 3097 aa6.92□□□□□ -1.3
RNF43-208ENST00000584437 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
RNF43-208ENST00000584437 KALRNO60229 2985 aa6.9□□□□□ -1.31
RNF43-208ENST00000584437 UNC80Q8N2C7 3258 aa6.87□□□□□ -1.31
RNF43-208ENST00000584437 XP32Q5T750 250 aa6.86□□□□□ -1.31
RNF43-208ENST00000584437 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
RNF43-208ENST00000584437 VPS13AQ96RL7 3174 aa6.82□□□□□ -1.32
RNF43-208ENST00000584437 FREM2Q5SZK8 3169 aa6.81□□□□□ -1.32
RNF43-208ENST00000584437 NIPBLQ6KC79 2804 aaeCLIP6.8□□□□□ -1.32
RNF43-208ENST00000584437 PRUNE2Q8WUY3 3088 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms