RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TRIAP1O43715 76 aa8.94□□□□□ -0.98
SKA2-209ENST00000583976 SPRR1BP22528 89 aa8.94□□□□□ -0.98
SKA2-209ENST00000583976 PSMB2P49721 201 aa8.94□□□□□ -0.98
SKA2-209ENST00000583976 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
SKA2-209ENST00000583976 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
SKA2-209ENST00000583976 H0YGX0 51 aa8.93□□□□□ -0.98
SKA2-209ENST00000583976 Q6ZQY7 126 aa8.93□□□□□ -0.98
SKA2-209ENST00000583976 Q8NBF4 154 aa8.93□□□□□ -0.98
SKA2-209ENST00000583976 LAMTOR3Q9UHA4 124 aa8.93□□□□□ -0.98
SKA2-209ENST00000583976 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
SKA2-209ENST00000583976 FAM218AQ96MZ4 157 aa8.92□□□□□ -0.98
SKA2-209ENST00000583976 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
SKA2-209ENST00000583976 Q8N377 158 aa8.91□□□□□ -0.98
SKA2-209ENST00000583976 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
SKA2-209ENST00000583976 BATFQ16520 125 aa8.89□□□□□ -0.99
SKA2-209ENST00000583976 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
SKA2-209ENST00000583976 SMIM29Q86T20 159 aa8.89□□□□□ -0.99
SKA2-209ENST00000583976 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
SKA2-209ENST00000583976 SNCGO76070 127 aa8.88□□□□□ -0.99
SKA2-209ENST00000583976 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
SKA2-209ENST00000583976 COX6CP09669 75 aa8.87□□□□□ -0.99
SKA2-209ENST00000583976 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
SKA2-209ENST00000583976 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
SKA2-209ENST00000583976 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
SKA2-209ENST00000583976 A0A1B0GX51 115 aa8.83□□□□□ -1
SKA2-209ENST00000583976 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
SKA2-209ENST00000583976 HRCT1Q6UXD1 115 aa8.83□□□□□ -1
SKA2-209ENST00000583976 A0A0G2JQZ4 141 aa8.82□□□□□ -1
SKA2-209ENST00000583976 SNHG12Q9BXW3 62 aa8.82□□□□□ -1
SKA2-209ENST00000583976 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
SKA2-209ENST00000583976 F8WEM9 126 aa8.81□□□□□ -1
SKA2-209ENST00000583976 SPINK1P00995 79 aa8.81□□□□□ -1
SKA2-209ENST00000583976 OCIAD2Q56VL3 154 aa8.81□□□□□ -1
SKA2-209ENST00000583976 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
SKA2-209ENST00000583976 DNAL4O96015 105 aa8.8□□□□□ -1
SKA2-209ENST00000583976 PPDPFLQ8WWR9 84 aa8.79□□□□□ -1
SKA2-209ENST00000583976 FABP2P12104 132 aa8.78□□□□□ -1
SKA2-209ENST00000583976 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
SKA2-209ENST00000583976 LST1O00453 97 aa8.76□□□□□ -1.01
SKA2-209ENST00000583976 PCP4L1A6NKN8 68 aa8.75□□□□□ -1.01
SKA2-209ENST00000583976 H3BUT2 72 aa8.75□□□□□ -1.01
SKA2-209ENST00000583976 GHRHP01286 108 aa8.75□□□□□ -1.01
SKA2-209ENST00000583976 NDUFV3P56181 108 aaKnown RBP8.75□□□□□ -1.01
SKA2-209ENST00000583976 ORMDL1Q9P0S3 153 aa8.75□□□□□ -1.01
SKA2-209ENST00000583976 TRACP01848 142 aa8.73□□□□□ -1.01
SKA2-209ENST00000583976 IGLV8-61A0A075B6I0 122 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 TAX1BP3O14907 124 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 TCL1BO95988 128 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
SKA2-209ENST00000583976 Q6JHZ5 121 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 IGFL1Q6UW32 110 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 FSIP2Q5CZC0 6907 aa8.72□□□□□ -1.01
SKA2-209ENST00000583976 CD164Q04900 197 aa8.71□□□□□ -1.02
SKA2-209ENST00000583976 A0A1B0GV72 72 aa8.7□□□□□ -1.02
SKA2-209ENST00000583976 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
SKA2-209ENST00000583976 H3BMG7 143 aa8.7□□□□□ -1.02
SKA2-209ENST00000583976 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
SKA2-209ENST00000583976 ATXN8Q156A1 80 aa8.7□□□□□ -1.02
SKA2-209ENST00000583976 H3BQ85 93 aa8.68□□□□□ -1.02
SKA2-209ENST00000583976 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
SKA2-209ENST00000583976 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
SKA2-209ENST00000583976 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
SKA2-209ENST00000583976 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
SKA2-209ENST00000583976 A0A1W2PPM0 123 aa8.65□□□□□ -1.02
SKA2-209ENST00000583976 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
SKA2-209ENST00000583976 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
SKA2-209ENST00000583976 COL5A1-AS1Q5SY13 56 aa8.64□□□□□ -1.03
SKA2-209ENST00000583976 XP32Q5T750 250 aa8.64□□□□□ -1.03
SKA2-209ENST00000583976 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
SKA2-209ENST00000583976 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
SKA2-209ENST00000583976 ANKRD29Q8N6D5 301 aa8.62□□□□□ -1.03
SKA2-209ENST00000583976 C9JAW5 83 aa8.61□□□□□ -1.03
SKA2-209ENST00000583976 Q5XG85 94 aa8.6□□□□□ -1.03
SKA2-209ENST00000583976 KRTAP19-2Q3LHN2 52 aa8.59□□□□□ -1.03
SKA2-209ENST00000583976 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
SKA2-209ENST00000583976 A0A1W2PNM2 257 aa8.57□□□□□ -1.04
SKA2-209ENST00000583976 RBM3P98179 157 aaKnown RBP8.57□□□□□ -1.04
SKA2-209ENST00000583976 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
SKA2-209ENST00000583976 Q6Q795 121 aa8.57□□□□□ -1.04
SKA2-209ENST00000583976 SPCS1Q9Y6A9 102 aa8.57□□□□□ -1.04
SKA2-209ENST00000583976 MTURNQ8N3F0 131 aa8.56□□□□□ -1.04
SKA2-209ENST00000583976 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
SKA2-209ENST00000583976 A0A087WSZ3 146 aa8.55□□□□□ -1.04
SKA2-209ENST00000583976 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
SKA2-209ENST00000583976 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
SKA2-209ENST00000583976 TRBV7-4A0A0J9YYF1 115 aa8.53□□□□□ -1.04
SKA2-209ENST00000583976 CCKP06307 115 aa8.53□□□□□ -1.04
SKA2-209ENST00000583976 MT1HP80294 61 aa8.53□□□□□ -1.04
SKA2-209ENST00000583976 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
SKA2-209ENST00000583976 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
SKA2-209ENST00000583976 JMJD7-PLA2G4BH0Y9G9 81 aa8.5□□□□□ -1.05
SKA2-209ENST00000583976 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
SKA2-209ENST00000583976 H3BT86 120 aa8.49□□□□□ -1.05
SKA2-209ENST00000583976 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
SKA2-209ENST00000583976 K7EP34 96 aa8.47□□□□□ -1.05
SKA2-209ENST00000583976 Q6ZQT0 140 aa8.44□□□□□ -1.06
SKA2-209ENST00000583976 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
SKA2-209ENST00000583976 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
SKA2-209ENST00000583976 LCE2BO14633 110 aa8.43□□□□□ -1.06
SKA2-209ENST00000583976 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms