RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
CASC3-209ENST00000583902 PDE6GP18545 87 aa5.61□□□□□ -1.51
CASC3-209ENST00000583902 LINC00483Q53H64 154 aa5.61□□□□□ -1.51
CASC3-209ENST00000583902 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
CASC3-209ENST00000583902 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
CASC3-209ENST00000583902 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
CASC3-209ENST00000583902 PRO0461Q9UI25 63 aa5.6□□□□□ -1.51
CASC3-209ENST00000583902 F8WEM9 126 aa5.59□□□□□ -1.51
CASC3-209ENST00000583902 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
CASC3-209ENST00000583902 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
CASC3-209ENST00000583902 DNAH11Q96DT5 4516 aa5.58□□□□□ -1.52
CASC3-209ENST00000583902 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
CASC3-209ENST00000583902 LINC01547P58512 204 aaPredicted RBP5.58□□□□□ -1.52
CASC3-209ENST00000583902 HAMPP81172 84 aa5.58□□□□□ -1.52
CASC3-209ENST00000583902 Q8N1X5 172 aa5.58□□□□□ -1.52
CASC3-209ENST00000583902 Q8N377 158 aa5.58□□□□□ -1.52
CASC3-209ENST00000583902 EPPK1P58107 5090 aaKnown RBP5.58□□□□□ -1.52
CASC3-209ENST00000583902 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
CASC3-209ENST00000583902 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
CASC3-209ENST00000583902 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
CASC3-209ENST00000583902 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
CASC3-209ENST00000583902 Q6JHZ5 121 aa5.57□□□□□ -1.52
CASC3-209ENST00000583902 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
CASC3-209ENST00000583902 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
CASC3-209ENST00000583902 A0A1B0GW54 56 aa5.56□□□□□ -1.52
CASC3-209ENST00000583902 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
CASC3-209ENST00000583902 OBSCN-AS1Q96MR7 158 aa5.56□□□□□ -1.52
CASC3-209ENST00000583902 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
CASC3-209ENST00000583902 Q5VSD8 79 aa5.55□□□□□ -1.52
CASC3-209ENST00000583902 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
CASC3-209ENST00000583902 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
CASC3-209ENST00000583902 DSCR8Q96T75 97 aa5.55□□□□□ -1.52
CASC3-209ENST00000583902 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
CASC3-209ENST00000583902 CRYGAP11844 174 aa5.54□□□□□ -1.52
CASC3-209ENST00000583902 SSBP3-AS1Q7Z2R9 100 aa5.54□□□□□ -1.52
CASC3-209ENST00000583902 DNAH8Q96JB1 4490 aa5.53□□□□□ -1.52
CASC3-209ENST00000583902 LOC110117498A0A087WWA1 95 aa5.53□□□□□ -1.52
CASC3-209ENST00000583902 J3QR89 54 aa5.53□□□□□ -1.52
CASC3-209ENST00000583902 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
CASC3-209ENST00000583902 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
CASC3-209ENST00000583902 Q8NBF4 154 aa5.52□□□□□ -1.53
CASC3-209ENST00000583902 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
CASC3-209ENST00000583902 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
CASC3-209ENST00000583902 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
CASC3-209ENST00000583902 CD164Q04900 197 aa5.5□□□□□ -1.53
CASC3-209ENST00000583902 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
CASC3-209ENST00000583902 Q6Q795 121 aa5.5□□□□□ -1.53
CASC3-209ENST00000583902 MTURNQ8N3F0 131 aa5.5□□□□□ -1.53
CASC3-209ENST00000583902 ACYP1P07311 99 aa5.49□□□□□ -1.53
CASC3-209ENST00000583902 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CASC3-209ENST00000583902 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
CASC3-209ENST00000583902 FAM240AA0A1B0GVK7 77 aa5.48□□□□□ -1.53
CASC3-209ENST00000583902 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
CASC3-209ENST00000583902 CCKP06307 115 aa5.47□□□□□ -1.53
CASC3-209ENST00000583902 SPAG11AQ6PDA7 123 aa5.47□□□□□ -1.53
CASC3-209ENST00000583902 Q6ZQT0 140 aa5.47□□□□□ -1.53
CASC3-209ENST00000583902 K7ERU9 68 aa5.46□□□□□ -1.54
CASC3-209ENST00000583902 OXTP01178 125 aa5.46□□□□□ -1.54
CASC3-209ENST00000583902 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
CASC3-209ENST00000583902 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
CASC3-209ENST00000583902 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
CASC3-209ENST00000583902 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
CASC3-209ENST00000583902 MOBPQ13875 183 aa5.45□□□□□ -1.54
CASC3-209ENST00000583902 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
CASC3-209ENST00000583902 TYMSOSQ8TAI1 123 aa5.45□□□□□ -1.54
CASC3-209ENST00000583902 SS18L2Q9UHA2 77 aa5.44□□□□□ -1.54
CASC3-209ENST00000583902 SRRM2Q9UQ35 2752 aaKnown RBP5.43□□□□□ -1.54
CASC3-209ENST00000583902 A0A087X002 238 aa5.43□□□□□ -1.54
CASC3-209ENST00000583902 SPINK1P00995 79 aa5.43□□□□□ -1.54
CASC3-209ENST00000583902 Q5XG85 94 aa5.43□□□□□ -1.54
CASC3-209ENST00000583902 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
CASC3-209ENST00000583902 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
CASC3-209ENST00000583902 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 TRBV7-7A0A0K0K1E9 115 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
CASC3-209ENST00000583902 A0A1W2PNM2 257 aa5.4□□□□□ -1.54
CASC3-209ENST00000583902 ASB16-AS1Q495Z4 193 aa5.4□□□□□ -1.54
CASC3-209ENST00000583902 UBL5Q9BZL1 73 aa5.4□□□□□ -1.54
CASC3-209ENST00000583902 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
CASC3-209ENST00000583902 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
CASC3-209ENST00000583902 VPS25Q9BRG1 176 aa5.39□□□□□ -1.55
CASC3-209ENST00000583902 A0A1B0GV72 72 aa5.38□□□□□ -1.55
CASC3-209ENST00000583902 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
CASC3-209ENST00000583902 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
CASC3-209ENST00000583902 FLG2Q5D862 2391 aaPredicted RBP5.36□□□□□ -1.55
CASC3-209ENST00000583902 NREPQ16612 68 aa5.36□□□□□ -1.55
CASC3-209ENST00000583902 A0A087WSZ3 146 aa5.35□□□□□ -1.55
CASC3-209ENST00000583902 J3KT08 172 aa5.35□□□□□ -1.55
CASC3-209ENST00000583902 ATP5EP2Q5VTU8 51 aa5.35□□□□□ -1.55
CASC3-209ENST00000583902 HSPG2P98160 4391 aa5.34□□□□□ -1.55
CASC3-209ENST00000583902 LINC00643Q86TS7 51 aa5.33□□□□□ -1.56
CASC3-209ENST00000583902 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
CASC3-209ENST00000583902 RYR1P21817 5038 aa5.33□□□□□ -1.56
CASC3-209ENST00000583902 CXCL6P80162 114 aa5.32□□□□□ -1.56
CASC3-209ENST00000583902 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
CASC3-209ENST00000583902 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
CASC3-209ENST00000583902 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms