RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 RPS10P5Q9NQ39 176 aa4.3□□□□□ -1.72
CDK5RAP3-224ENST00000582275 ZNF815PA8K554 130 aa4.29□□□□□ -1.72
CDK5RAP3-224ENST00000582275 SOSTDC1Q6X4U4 206 aa4.29□□□□□ -1.72
CDK5RAP3-224ENST00000582275 TRBV7-7A0A0K0K1E9 115 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 NPC2P61916 151 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 Q6JHZ5 121 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 LINC00518Q8N0U6 118 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 MTURNQ8N3F0 131 aa4.28□□□□□ -1.72
CDK5RAP3-224ENST00000582275 PLNP26678 52 aa4.27□□□□□ -1.73
CDK5RAP3-224ENST00000582275 Q6ZVH6 145 aa4.27□□□□□ -1.73
CDK5RAP3-224ENST00000582275 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
CDK5RAP3-224ENST00000582275 A4D1N5 150 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 A8MWP4 228 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 LST1O00453 97 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 TRAPPC1Q9Y5R8 145 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
CDK5RAP3-224ENST00000582275 ADAMTSL4-AS1Q5T5F5 129 aa4.25□□□□□ -1.73
CDK5RAP3-224ENST00000582275 A0A0J9YXY3 114 aa4.24□□□□□ -1.73
CDK5RAP3-224ENST00000582275 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
CDK5RAP3-224ENST00000582275 LINC00308Q8TCZ7 52 aa4.24□□□□□ -1.73
CDK5RAP3-224ENST00000582275 TRAV13-2A0A0B4J235 113 aa4.23□□□□□ -1.73
CDK5RAP3-224ENST00000582275 HRES1P13985 223 aa4.23□□□□□ -1.73
CDK5RAP3-224ENST00000582275 H0Y8G0 127 aa4.22□□□□□ -1.73
CDK5RAP3-224ENST00000582275 TIMM17BO60830 172 aa4.22□□□□□ -1.73
CDK5RAP3-224ENST00000582275 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
CDK5RAP3-224ENST00000582275 SS18L2Q9UHA2 77 aa4.22□□□□□ -1.73
CDK5RAP3-224ENST00000582275 DPM2O94777 84 aa4.21□□□□□ -1.74
CDK5RAP3-224ENST00000582275 CLLU1Q5K131 121 aa4.21□□□□□ -1.74
CDK5RAP3-224ENST00000582275 HSBP1O75506 76 aa4.2□□□□□ -1.74
CDK5RAP3-224ENST00000582275 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
CDK5RAP3-224ENST00000582275 S100A1P23297 94 aa4.2□□□□□ -1.74
CDK5RAP3-224ENST00000582275 UQCC3Q6UW78 93 aa4.2□□□□□ -1.74
CDK5RAP3-224ENST00000582275 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
CDK5RAP3-224ENST00000582275 IGKCP01834 107 aa4.19□□□□□ -1.74
CDK5RAP3-224ENST00000582275 NDUFA5Q16718 116 aa4.19□□□□□ -1.74
CDK5RAP3-224ENST00000582275 SLC7A5P1Q8MH63 180 aa4.19□□□□□ -1.74
CDK5RAP3-224ENST00000582275 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
CDK5RAP3-224ENST00000582275 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 E9PLD3 99 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 OCIAD2Q56VL3 154 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 NOTCH2NLQ7Z3S9 236 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 COPS9Q8WXC6 57 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 LITAFQ99732 161 aa4.18□□□□□ -1.74
CDK5RAP3-224ENST00000582275 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
CDK5RAP3-224ENST00000582275 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
CDK5RAP3-224ENST00000582275 SCGB1D1O95968 90 aa4.17□□□□□ -1.74
CDK5RAP3-224ENST00000582275 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
CDK5RAP3-224ENST00000582275 A6NDN8 102 aa4.16□□□□□ -1.74
CDK5RAP3-224ENST00000582275 A6NN06 94 aa4.16□□□□□ -1.74
CDK5RAP3-224ENST00000582275 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
CDK5RAP3-224ENST00000582275 SERF1AO75920 110 aa4.15□□□□□ -1.75
CDK5RAP3-224ENST00000582275 DSCR10P59022 87 aa4.15□□□□□ -1.75
CDK5RAP3-224ENST00000582275 VAMP3Q15836 100 aa4.15□□□□□ -1.75
CDK5RAP3-224ENST00000582275 APOC3P02656 99 aa4.14□□□□□ -1.75
CDK5RAP3-224ENST00000582275 LINC00313P59037 77 aa4.14□□□□□ -1.75
CDK5RAP3-224ENST00000582275 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
CDK5RAP3-224ENST00000582275 PPDPFLQ8WWR9 84 aa4.14□□□□□ -1.75
CDK5RAP3-224ENST00000582275 LOC105371267A0A1B0GV96 52 aa4.13□□□□□ -1.75
CDK5RAP3-224ENST00000582275 SNAPINO95295 136 aa4.13□□□□□ -1.75
CDK5RAP3-224ENST00000582275 Q6ZQY7 126 aa4.13□□□□□ -1.75
CDK5RAP3-224ENST00000582275 PMCHL2Q9BQD1 86 aa4.13□□□□□ -1.75
CDK5RAP3-224ENST00000582275 SVBPQ8N300 66 aa4.12□□□□□ -1.75
CDK5RAP3-224ENST00000582275 SNHG12Q9BXW3 62 aa4.12□□□□□ -1.75
CDK5RAP3-224ENST00000582275 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
CDK5RAP3-224ENST00000582275 IFITM1P13164 125 aa4.11□□□□□ -1.75
CDK5RAP3-224ENST00000582275 LINC00575Q6W349 94 aa4.11□□□□□ -1.75
CDK5RAP3-224ENST00000582275 TEN1Q86WV5 123 aa4.11□□□□□ -1.75
CDK5RAP3-224ENST00000582275 COLCA2A8K830 154 aa4.1□□□□□ -1.75
CDK5RAP3-224ENST00000582275 SMIM11BQ8TCY0 68 aa4.1□□□□□ -1.75
CDK5RAP3-224ENST00000582275 SIGMAR1Q99720 223 aa4.1□□□□□ -1.75
CDK5RAP3-224ENST00000582275 KMT2DO14686 5537 aa4.1□□□□□ -1.75
CDK5RAP3-224ENST00000582275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.09□□□□□ -1.75
CDK5RAP3-224ENST00000582275 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
CDK5RAP3-224ENST00000582275 FABP4P15090 132 aa4.08□□□□□ -1.76
CDK5RAP3-224ENST00000582275 A0A087WSZ3 146 aa4.07□□□□□ -1.76
CDK5RAP3-224ENST00000582275 H3BUT2 72 aa4.07□□□□□ -1.76
CDK5RAP3-224ENST00000582275 SCGB1D4Q6XE38 83 aa4.07□□□□□ -1.76
CDK5RAP3-224ENST00000582275 FAM218AQ96MZ4 157 aa4.07□□□□□ -1.76
CDK5RAP3-224ENST00000582275 SPINK7P58062 85 aa4.06□□□□□ -1.76
CDK5RAP3-224ENST00000582275 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
CDK5RAP3-224ENST00000582275 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
CDK5RAP3-224ENST00000582275 IGKV4-1P06312 121 aa4.04□□□□□ -1.76
CDK5RAP3-224ENST00000582275 PCP4P48539 62 aa4.04□□□□□ -1.76
CDK5RAP3-224ENST00000582275 C12orf57Q99622 126 aa4.04□□□□□ -1.76
CDK5RAP3-224ENST00000582275 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
CDK5RAP3-224ENST00000582275 C3orf79P0CE67 100 aa4.03□□□□□ -1.76
CDK5RAP3-224ENST00000582275 Q5VV11 94 aa4.03□□□□□ -1.76
CDK5RAP3-224ENST00000582275 MUSTN1Q8IVN3 82 aa4.03□□□□□ -1.76
CDK5RAP3-224ENST00000582275 ZCCHC13Q8WW36 166 aaKnown RBP4.03□□□□□ -1.76
CDK5RAP3-224ENST00000582275 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
CDK5RAP3-224ENST00000582275 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
CDK5RAP3-224ENST00000582275 WFDC13Q8IUB5 93 aa4.02□□□□□ -1.77
CDK5RAP3-224ENST00000582275 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
CDK5RAP3-224ENST00000582275 SYS1-DBNDD2H3BUS1 97 aa4.01□□□□□ -1.77
CDK5RAP3-224ENST00000582275 SNCGO76070 127 aa4.01□□□□□ -1.77
CDK5RAP3-224ENST00000582275 C8orf87E5RJ46 101 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms