RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 IGLV5-48A0A075B6I7 105 aa8.54□□□□□ -1.04
SKA2-205ENST00000580541 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
SKA2-205ENST00000580541 SPRR1BP22528 89 aa8.54□□□□□ -1.04
SKA2-205ENST00000580541 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
SKA2-205ENST00000580541 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
SKA2-205ENST00000580541 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
SKA2-205ENST00000580541 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
SKA2-205ENST00000580541 LST1O00453 97 aa8.53□□□□□ -1.04
SKA2-205ENST00000580541 ORMDL1Q9P0S3 153 aa8.52□□□□□ -1.05
SKA2-205ENST00000580541 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
SKA2-205ENST00000580541 KRTAP29-1A8MX34 341 aaPredicted RBP8.51□□□□□ -1.05
SKA2-205ENST00000580541 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
SKA2-205ENST00000580541 Q8N377 158 aa8.5□□□□□ -1.05
SKA2-205ENST00000580541 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
SKA2-205ENST00000580541 F8WEM9 126 aa8.49□□□□□ -1.05
SKA2-205ENST00000580541 TCL1BO95988 128 aa8.49□□□□□ -1.05
SKA2-205ENST00000580541 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
SKA2-205ENST00000580541 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
SKA2-205ENST00000580541 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
SKA2-205ENST00000580541 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
SKA2-205ENST00000580541 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
SKA2-205ENST00000580541 A0A087X002 238 aa8.46□□□□□ -1.06
SKA2-205ENST00000580541 IGLV9-49A0A0B4J1Y8 123 aa8.46□□□□□ -1.06
SKA2-205ENST00000580541 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
SKA2-205ENST00000580541 BAALC-AS2P0C853 105 aa8.45□□□□□ -1.06
SKA2-205ENST00000580541 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
SKA2-205ENST00000580541 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
SKA2-205ENST00000580541 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
SKA2-205ENST00000580541 GTF2H5Q6ZYL4 71 aa8.44□□□□□ -1.06
SKA2-205ENST00000580541 Q8NBF4 154 aa8.44□□□□□ -1.06
SKA2-205ENST00000580541 NDUFV3P56181 108 aaKnown RBP8.43□□□□□ -1.06
SKA2-205ENST00000580541 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
SKA2-205ENST00000580541 MOBPQ13875 183 aa8.42□□□□□ -1.06
SKA2-205ENST00000580541 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
SKA2-205ENST00000580541 C9JAW5 83 aa8.41□□□□□ -1.06
SKA2-205ENST00000580541 H3BMG7 143 aa8.41□□□□□ -1.06
SKA2-205ENST00000580541 Q6JHZ5 121 aa8.41□□□□□ -1.06
SKA2-205ENST00000580541 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
SKA2-205ENST00000580541 C3orf22Q8N5N4 141 aa8.41□□□□□ -1.06
SKA2-205ENST00000580541 K7EP34 96 aa8.39□□□□□ -1.07
SKA2-205ENST00000580541 ANKRD29Q8N6D5 301 aa8.39□□□□□ -1.07
SKA2-205ENST00000580541 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
SKA2-205ENST00000580541 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
SKA2-205ENST00000580541 H3BT86 120 aa8.37□□□□□ -1.07
SKA2-205ENST00000580541 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
SKA2-205ENST00000580541 JMJD7-PLA2G4BH0Y9G9 81 aa8.36□□□□□ -1.07
SKA2-205ENST00000580541 SPINK1P00995 79 aa8.35□□□□□ -1.07
SKA2-205ENST00000580541 RBM3P98179 157 aaKnown RBP8.35□□□□□ -1.07
SKA2-205ENST00000580541 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
SKA2-205ENST00000580541 CD164Q04900 197 aa8.34□□□□□ -1.07
SKA2-205ENST00000580541 DSCR8Q96T75 97 aa8.34□□□□□ -1.07
SKA2-205ENST00000580541 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.08
SKA2-205ENST00000580541 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
SKA2-205ENST00000580541 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
SKA2-205ENST00000580541 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
SKA2-205ENST00000580541 F8W1H4 67 aa8.31□□□□□ -1.08
SKA2-205ENST00000580541 PDE6GP18545 87 aa8.31□□□□□ -1.08
SKA2-205ENST00000580541 C21orf62-AS1Q17RA5 79 aa8.31□□□□□ -1.08
SKA2-205ENST00000580541 LCE3BQ5TA77 95 aa8.31□□□□□ -1.08
SKA2-205ENST00000580541 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
SKA2-205ENST00000580541 IGFL1Q6UW32 110 aa8.3□□□□□ -1.08
SKA2-205ENST00000580541 PCLOQ9Y6V0 5065 aa8.29□□□□□ -1.08
SKA2-205ENST00000580541 TEN1Q86WV5 123 aa8.28□□□□□ -1.08
SKA2-205ENST00000580541 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
SKA2-205ENST00000580541 Q6Q795 121 aa8.27□□□□□ -1.09
SKA2-205ENST00000580541 HRCT1Q6UXD1 115 aa8.27□□□□□ -1.09
SKA2-205ENST00000580541 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
SKA2-205ENST00000580541 A0A1B0GV72 72 aa8.26□□□□□ -1.09
SKA2-205ENST00000580541 TNXBP22105 4242 aa8.26□□□□□ -1.09
SKA2-205ENST00000580541 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
SKA2-205ENST00000580541 OBSCN-AS1Q96MR7 158 aa8.25□□□□□ -1.09
SKA2-205ENST00000580541 A0A1B0GV90 55 aa8.24□□□□□ -1.09
SKA2-205ENST00000580541 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
SKA2-205ENST00000580541 LOC110117498A0A087WWA1 95 aa8.23□□□□□ -1.09
SKA2-205ENST00000580541 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
SKA2-205ENST00000580541 CCKP06307 115 aa8.23□□□□□ -1.09
SKA2-205ENST00000580541 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
SKA2-205ENST00000580541 A0A1B0GW54 56 aa8.22□□□□□ -1.09
SKA2-205ENST00000580541 Q5XG85 94 aa8.22□□□□□ -1.09
SKA2-205ENST00000580541 SS18L2Q9UHA2 77 aa8.22□□□□□ -1.09
SKA2-205ENST00000580541 VPS25Q9BRG1 176 aa8.21□□□□□ -1.1
SKA2-205ENST00000580541 C14orf132Q9NPU4 83 aa8.2□□□□□ -1.1
SKA2-205ENST00000580541 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
SKA2-205ENST00000580541 Q6ZQT0 140 aa8.19□□□□□ -1.1
SKA2-205ENST00000580541 A0A087WSZ3 146 aa8.16□□□□□ -1.1
SKA2-205ENST00000580541 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
SKA2-205ENST00000580541 ETDBQ3ZM63 59 aa8.15□□□□□ -1.1
SKA2-205ENST00000580541 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
SKA2-205ENST00000580541 FP248Q71RG6 208 aaPredicted RBP8.14□□□□□ -1.11
SKA2-205ENST00000580541 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
SKA2-205ENST00000580541 PRR4Q16378 134 aa8.11□□□□□ -1.11
SKA2-205ENST00000580541 KRTAP9-9Q9BYP9 154 aa8.11□□□□□ -1.11
SKA2-205ENST00000580541 KRTAP9-4Q9BYQ2 154 aa8.11□□□□□ -1.11
SKA2-205ENST00000580541 C1orf195Q5TG92 126 aa8.09□□□□□ -1.11
SKA2-205ENST00000580541 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
SKA2-205ENST00000580541 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
SKA2-205ENST00000580541 NREPQ16612 68 aa8.07□□□□□ -1.12
SKA2-205ENST00000580541 J3KT08 172 aa8.04□□□□□ -1.12
SKA2-205ENST00000580541 ACYP1P07311 99 aa8.03□□□□□ -1.12
SKA2-205ENST00000580541 J3QR89 54 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms