RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 DMDP11532 3685 aa3.48□□□□□ -1.85
DDX42-210ENST00000579539 ADGRG4Q8IZF6 3080 aa3.48□□□□□ -1.85
DDX42-210ENST00000579539 CEP290O15078 2479 aa3.48□□□□□ -1.85
DDX42-210ENST00000579539 ZNF861PO60384 105 aa3.47□□□□□ -1.85
DDX42-210ENST00000579539 IGLV7-43P04211 117 aa3.47□□□□□ -1.85
DDX42-210ENST00000579539 GPR179Q6PRD1 2367 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 PKD1L2Q7Z442 2459 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 PTPRZ1P23471 2315 aaPredicted RBP3.46□□□□□ -1.86
DDX42-210ENST00000579539 DNAH10OSP0CZ25 163 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 DEFB123Q8N688 67 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 DCHS1Q96JQ0 3298 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 CR1P17927 2039 aa3.46□□□□□ -1.86
DDX42-210ENST00000579539 MAP1AP78559 2803 aaPredicted RBP3.45□□□□□ -1.86
DDX42-210ENST00000579539 LRBAP50851 2863 aa3.45□□□□□ -1.86
DDX42-210ENST00000579539 AKAP6Q13023 2319 aa3.44□□□□□ -1.86
DDX42-210ENST00000579539 SPENQ96T58 3664 aaKnown RBP3.44□□□□□ -1.86
DDX42-210ENST00000579539 C2CD3Q4AC94 2353 aa3.43□□□□□ -1.86
DDX42-210ENST00000579539 K7ERS5 55 aa3.43□□□□□ -1.86
DDX42-210ENST00000579539 HTN3P15516 51 aa3.43□□□□□ -1.86
DDX42-210ENST00000579539 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
DDX42-210ENST00000579539 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
DDX42-210ENST00000579539 Q96NJ1 140 aa3.41□□□□□ -1.86
DDX42-210ENST00000579539 ZDBF2Q9HCK1 2354 aa3.41□□□□□ -1.86
DDX42-210ENST00000579539 DCHS2Q6V1P9 2916 aa3.41□□□□□ -1.86
DDX42-210ENST00000579539 SPTAN1Q13813 2472 aaKnown RBP3.4□□□□□ -1.87
DDX42-210ENST00000579539 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
DDX42-210ENST00000579539 TRIOBPQ9H2D6 2365 aa3.39□□□□□ -1.87
DDX42-210ENST00000579539 CSMD1Q96PZ7 3565 aa3.39□□□□□ -1.87
DDX42-210ENST00000579539 DEFB113Q30KQ7 82 aa3.39□□□□□ -1.87
DDX42-210ENST00000579539 LY6G6CO95867 125 aa3.38□□□□□ -1.87
DDX42-210ENST00000579539 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
DDX42-210ENST00000579539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.38□□□□□ -1.872e-13■■■□□ 16.4
DDX42-210ENST00000579539 LOC400499M0QZD8 3231 aa3.38□□□□□ -1.87
DDX42-210ENST00000579539 KMT2BQ9UMN6 2715 aaPredicted RBP3.37□□□□□ -1.87
DDX42-210ENST00000579539 CELSR1Q9NYQ6 3014 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
DDX42-210ENST00000579539 A8MUU9 505 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 PANO1I0J062 215 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 DEFB4AO15263 64 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 PRLHP81277 87 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
DDX42-210ENST00000579539 ZFHX4Q86UP3 3567 aa3.36□□□□□ -1.87
DDX42-210ENST00000579539 ANKRD11Q6UB99 2663 aaPredicted RBP3.36□□□□□ -1.87
DDX42-210ENST00000579539 A0A0G2JQZ4 141 aa3.36□□□□□ -1.87
DDX42-210ENST00000579539 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
DDX42-210ENST00000579539 NCOR1O75376 2440 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 ALMS1Q8TCU4 4167 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 CHD6Q8TD26 2715 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 BOD1L1Q8NFC6 3051 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 ACACAQ13085 2346 aa3.35□□□□□ -1.87
DDX42-210ENST00000579539 ABCA2Q9BZC7 2435 aa3.34□□□□□ -1.87
DDX42-210ENST00000579539 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 NUPR2A6NF83 97 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 Q5W150 140 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 KRTAP13-1Q8IUC0 172 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 OTOGLQ3ZCN5 2332 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 SPTA1P02549 2419 aa3.33□□□□□ -1.88
DDX42-210ENST00000579539 ASH1LQ9NR48 2969 aaKnown RBP3.32□□□□□ -1.88
DDX42-210ENST00000579539 ITPR1Q14643 2758 aa3.31□□□□□ -1.88
DDX42-210ENST00000579539 TLN1Q9Y490 2541 aaKnown RBP3.31□□□□□ -1.88
DDX42-210ENST00000579539 A0A096LNI7 61 aa3.31□□□□□ -1.88
DDX42-210ENST00000579539 COX6B2Q6YFQ2 88 aa3.31□□□□□ -1.88
DDX42-210ENST00000579539 NBPF19A0A087WUL8 3843 aa3.31□□□□□ -1.88
DDX42-210ENST00000579539 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
DDX42-210ENST00000579539 DMXL1Q9Y485 3027 aa3.3□□□□□ -1.88
DDX42-210ENST00000579539 A0A1B0GU33 70 aa3.3□□□□□ -1.88
DDX42-210ENST00000579539 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
DDX42-210ENST00000579539 ASPMQ8IZT6 3477 aa3.29□□□□□ -1.88
DDX42-210ENST00000579539 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
DDX42-210ENST00000579539 BSNQ9UPA5 3926 aa3.28□□□□□ -1.88
DDX42-210ENST00000579539 ATMQ13315 3056 aa3.28□□□□□ -1.88
DDX42-210ENST00000579539 CSPG4Q6UVK1 2322 aa3.28□□□□□ -1.88
DDX42-210ENST00000579539 K7EIL1 84 aa3.27□□□□□ -1.89
DDX42-210ENST00000579539 P0C880 135 aa3.27□□□□□ -1.89
DDX42-210ENST00000579539 Q6ZSA8 131 aa3.27□□□□□ -1.89
DDX42-210ENST00000579539 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
DDX42-210ENST00000579539 UTP20O75691 2785 aaKnown RBP3.26□□□□□ -1.89
DDX42-210ENST00000579539 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
DDX42-210ENST00000579539 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
DDX42-210ENST00000579539 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
DDX42-210ENST00000579539 COL12A1Q99715 3063 aa3.25□□□□□ -1.89
DDX42-210ENST00000579539 SPG11Q96JI7 2443 aa3.25□□□□□ -1.89
DDX42-210ENST00000579539 ATRXP46100 2492 aa3.25□□□□□ -1.89
DDX42-210ENST00000579539 MXRA5Q9NR99 2828 aa3.25□□□□□ -1.89
DDX42-210ENST00000579539 BDP1A6H8Y1 2624 aa3.25□□□□□ -1.89
DDX42-210ENST00000579539 SETXQ7Z333 2677 aaKnown RBP3.24□□□□□ -1.89
DDX42-210ENST00000579539 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
DDX42-210ENST00000579539 ZNF292O60281 2723 aa3.24□□□□□ -1.89
DDX42-210ENST00000579539 NBASA2RRP1 2371 aa3.24□□□□□ -1.89
DDX42-210ENST00000579539 TLN2Q9Y4G6 2542 aa3.23□□□□□ -1.89
DDX42-210ENST00000579539 CRYBG3Q68DQ2 2970 aa3.23□□□□□ -1.89
DDX42-210ENST00000579539 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
DDX42-210ENST00000579539 NCOR2Q9Y618 2525 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms