RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CEND1Q8N111 149 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 Q8N377 158 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 PRO1854Q9UHT4 67 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 A0A0B4J2C4 111 aa3.7□□□□□ -1.82
TRAF4-213ENST00000578917 SMCPP49901 116 aaPredicted RBP3.7□□□□□ -1.82
TRAF4-213ENST00000578917 CD164Q04900 197 aa3.7□□□□□ -1.82
TRAF4-213ENST00000578917 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.7□□□□□ -1.82
TRAF4-213ENST00000578917 C2orf91Q6ZV80 131 aa3.7□□□□□ -1.82
TRAF4-213ENST00000578917 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
TRAF4-213ENST00000578917 LPAP08519 4548 aa3.69□□□□□ -1.82
TRAF4-213ENST00000578917 A0A0G2JQZ4 141 aa3.69□□□□□ -1.82
TRAF4-213ENST00000578917 PSMB2P49721 201 aa3.69□□□□□ -1.82
TRAF4-213ENST00000578917 LINC01547P58512 204 aaPredicted RBP3.69□□□□□ -1.82
TRAF4-213ENST00000578917 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
TRAF4-213ENST00000578917 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 TCL1BO95988 128 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 GHRHP01286 108 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 HSD52Q0P140 79 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 Q6JHZ5 121 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 UQCR10Q9UDW1 63 aa3.68□□□□□ -1.82
TRAF4-213ENST00000578917 COX6CP09669 75 aa3.67□□□□□ -1.82
TRAF4-213ENST00000578917 FABP2P12104 132 aa3.67□□□□□ -1.82
TRAF4-213ENST00000578917 FXYD2P54710 66 aa3.67□□□□□ -1.82
TRAF4-213ENST00000578917 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
TRAF4-213ENST00000578917 PPDPFLQ8WWR9 84 aa3.67□□□□□ -1.82
TRAF4-213ENST00000578917 DNAL4O96015 105 aa3.66□□□□□ -1.82
TRAF4-213ENST00000578917 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
TRAF4-213ENST00000578917 C9orf92A6NGG3 77 aa3.65□□□□□ -1.83
TRAF4-213ENST00000578917 H3BUT2 72 aa3.65□□□□□ -1.83
TRAF4-213ENST00000578917 TRIAP1O43715 76 aa3.65□□□□□ -1.83
TRAF4-213ENST00000578917 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
TRAF4-213ENST00000578917 CLEC2BQ92478 149 aa3.65□□□□□ -1.83
TRAF4-213ENST00000578917 MUC2Q02817 5179 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 H3BMG7 143 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 K7ERJ3 54 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
TRAF4-213ENST00000578917 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 FAM218AQ96MZ4 157 aa3.64□□□□□ -1.83
TRAF4-213ENST00000578917 IGLV8-61A0A075B6I0 122 aa3.63□□□□□ -1.83
TRAF4-213ENST00000578917 A0A1B0GX51 115 aa3.63□□□□□ -1.83
TRAF4-213ENST00000578917 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
TRAF4-213ENST00000578917 Q5XG85 94 aa3.63□□□□□ -1.83
TRAF4-213ENST00000578917 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
TRAF4-213ENST00000578917 H3BQ85 93 aa3.62□□□□□ -1.83
TRAF4-213ENST00000578917 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
TRAF4-213ENST00000578917 ORMDL1Q9P0S3 153 aa3.62□□□□□ -1.83
TRAF4-213ENST00000578917 A0A1B0GV72 72 aa3.61□□□□□ -1.83
TRAF4-213ENST00000578917 LST1O00453 97 aa3.61□□□□□ -1.83
TRAF4-213ENST00000578917 XP32Q5T750 250 aa3.61□□□□□ -1.83
TRAF4-213ENST00000578917 TEN1Q86WV5 123 aa3.61□□□□□ -1.83
TRAF4-213ENST00000578917 TMEM256-PLSCR3K7ERE1 68 aa3.6□□□□□ -1.83
TRAF4-213ENST00000578917 M0R143 59 aa3.6□□□□□ -1.83
TRAF4-213ENST00000578917 ANKRD29Q8N6D5 301 aa3.6□□□□□ -1.83
TRAF4-213ENST00000578917 SS18L2Q9UHA2 77 aa3.6□□□□□ -1.83
TRAF4-213ENST00000578917 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
TRAF4-213ENST00000578917 A0A087WSZ3 146 aa3.58□□□□□ -1.84
TRAF4-213ENST00000578917 TSTD3H0UI37 97 aa3.58□□□□□ -1.84
TRAF4-213ENST00000578917 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
TRAF4-213ENST00000578917 TRACP01848 142 aa3.57□□□□□ -1.84
TRAF4-213ENST00000578917 BATFQ16520 125 aa3.57□□□□□ -1.84
TRAF4-213ENST00000578917 Q6Q795 121 aa3.57□□□□□ -1.84
TRAF4-213ENST00000578917 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
TRAF4-213ENST00000578917 CCKP06307 115 aa3.56□□□□□ -1.84
TRAF4-213ENST00000578917 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
TRAF4-213ENST00000578917 DSCR8Q96T75 97 aa3.56□□□□□ -1.84
TRAF4-213ENST00000578917 VPS25Q9BRG1 176 aa3.56□□□□□ -1.84
TRAF4-213ENST00000578917 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
TRAF4-213ENST00000578917 RBM3P98179 157 aaKnown RBP3.55□□□□□ -1.84
TRAF4-213ENST00000578917 UBE2V1Q13404 147 aa3.55□□□□□ -1.84
TRAF4-213ENST00000578917 ATXN8Q156A1 80 aa3.55□□□□□ -1.84
TRAF4-213ENST00000578917 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
TRAF4-213ENST00000578917 Q96NJ1 140 aa3.55□□□□□ -1.84
TRAF4-213ENST00000578917 NAA38Q9BRA0 125 aaKnown RBP3.55□□□□□ -1.84
TRAF4-213ENST00000578917 TRBV7-4A0A0J9YYF1 115 aa3.54□□□□□ -1.84
TRAF4-213ENST00000578917 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
TRAF4-213ENST00000578917 A0A1W2PNM2 257 aa3.54□□□□□ -1.84
TRAF4-213ENST00000578917 LYRM7Q5U5X0 104 aa3.54□□□□□ -1.84
TRAF4-213ENST00000578917 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
TRAF4-213ENST00000578917 C9JAW5 83 aa3.53□□□□□ -1.84
TRAF4-213ENST00000578917 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
TRAF4-213ENST00000578917 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
TRAF4-213ENST00000578917 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
TRAF4-213ENST00000578917 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
TRAF4-213ENST00000578917 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
TRAF4-213ENST00000578917 TRBV20-1A0A075B6N2 111 aa3.51□□□□□ -1.85
TRAF4-213ENST00000578917 LOC105371267A0A1B0GV96 52 aa3.51□□□□□ -1.85
TRAF4-213ENST00000578917 LINC00313P59037 77 aa3.51□□□□□ -1.85
TRAF4-213ENST00000578917 JMJD7-PLA2G4BH0Y9G9 81 aa3.5□□□□□ -1.85
TRAF4-213ENST00000578917 DSCR10P59022 87 aa3.5□□□□□ -1.85
TRAF4-213ENST00000578917 C21orf62-AS1Q17RA5 79 aa3.5□□□□□ -1.85
TRAF4-213ENST00000578917 COX6B2Q6YFQ2 88 aa3.5□□□□□ -1.85
TRAF4-213ENST00000578917 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
TRAF4-213ENST00000578917 LCE2CQ5TA81 110 aa3.49□□□□□ -1.85
TRAF4-213ENST00000578917 Q75L30 129 aa3.49□□□□□ -1.85
TRAF4-213ENST00000578917 C9orf118A6NHY6 69 aa3.48□□□□□ -1.85
TRAF4-213ENST00000578917 PDE6GP18545 87 aa3.48□□□□□ -1.85
TRAF4-213ENST00000578917 NDUFB1O75438 58 aa3.47□□□□□ -1.85
TRAF4-213ENST00000578917 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
TRAF4-213ENST00000578917 C14orf132Q9NPU4 83 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms