RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
PRPF8-208ENST00000573716 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
PRPF8-208ENST00000573716 A0A0G2JQZ4 141 aa6.33□□□□□ -1.4
PRPF8-208ENST00000573716 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
PRPF8-208ENST00000573716 LEPROTO15243 131 aa6.32□□□□□ -1.4
PRPF8-208ENST00000573716 GTF2H5Q6ZYL4 71 aa6.32□□□□□ -1.4
PRPF8-208ENST00000573716 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
PRPF8-208ENST00000573716 OR13C6PQ8NH95 151 aa6.32□□□□□ -1.4
PRPF8-208ENST00000573716 J3QR89 54 aa6.31□□□□□ -1.4
PRPF8-208ENST00000573716 VAMP3Q15836 100 aa6.31□□□□□ -1.4
PRPF8-208ENST00000573716 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
PRPF8-208ENST00000573716 SOSTDC1Q6X4U4 206 aa6.31□□□□□ -1.4
PRPF8-208ENST00000573716 Q5XG85 94 aa6.3□□□□□ -1.4
PRPF8-208ENST00000573716 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
PRPF8-208ENST00000573716 PMCHL2Q9BQD1 86 aa6.3□□□□□ -1.4
PRPF8-208ENST00000573716 J3QQQ9 107 aa6.29□□□□□ -1.4
PRPF8-208ENST00000573716 LGALS3P17931 250 aaKnown RBP6.29□□□□□ -1.4
PRPF8-208ENST00000573716 BATFQ16520 125 aa6.29□□□□□ -1.4
PRPF8-208ENST00000573716 COX7BP24311 80 aa6.28□□□□□ -1.4
PRPF8-208ENST00000573716 SPATA45Q537H7 98 aa6.28□□□□□ -1.4
PRPF8-208ENST00000573716 TEX49A0A1B0GTD5 131 aa6.27□□□□□ -1.41
PRPF8-208ENST00000573716 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
PRPF8-208ENST00000573716 SIGMAR1Q99720 223 aa6.27□□□□□ -1.41
PRPF8-208ENST00000573716 PAM16Q9Y3D7 125 aa6.27□□□□□ -1.41
PRPF8-208ENST00000573716 TCL1BO95988 128 aa6.26□□□□□ -1.41
PRPF8-208ENST00000573716 NMUP48645 174 aa6.26□□□□□ -1.41
PRPF8-208ENST00000573716 HERVK_113P61574 105 aa6.26□□□□□ -1.41
PRPF8-208ENST00000573716 ADAMTSL4-AS1Q5T5F5 129 aa6.26□□□□□ -1.41
PRPF8-208ENST00000573716 CHCHD1Q96BP2 118 aaKnown RBP6.25□□□□□ -1.41
PRPF8-208ENST00000573716 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
PRPF8-208ENST00000573716 MT2AP02795 61 aa6.24□□□□□ -1.41
PRPF8-208ENST00000573716 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
PRPF8-208ENST00000573716 C6orf99Q4VX62 202 aa6.24□□□□□ -1.41
PRPF8-208ENST00000573716 A0A0J9YXY3 114 aa6.23□□□□□ -1.41
PRPF8-208ENST00000573716 A6NDN8 102 aa6.23□□□□□ -1.41
PRPF8-208ENST00000573716 PLNP26678 52 aa6.23□□□□□ -1.41
PRPF8-208ENST00000573716 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
PRPF8-208ENST00000573716 HSBP1O75506 76 aa6.22□□□□□ -1.41
PRPF8-208ENST00000573716 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
PRPF8-208ENST00000573716 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.41
PRPF8-208ENST00000573716 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
PRPF8-208ENST00000573716 Q75L30 129 aa6.21□□□□□ -1.42
PRPF8-208ENST00000573716 SPANXDQ9BXN6 97 aa6.21□□□□□ -1.42
PRPF8-208ENST00000573716 TRBV20-1A0A075B6N2 111 aa6.2□□□□□ -1.42
PRPF8-208ENST00000573716 SERF1AO75920 110 aa6.2□□□□□ -1.42
PRPF8-208ENST00000573716 DPM2O94777 84 aa6.2□□□□□ -1.42
PRPF8-208ENST00000573716 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
PRPF8-208ENST00000573716 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
PRPF8-208ENST00000573716 MT1FP04733 61 aa6.19□□□□□ -1.42
PRPF8-208ENST00000573716 KRTDAPP60985 99 aa6.19□□□□□ -1.42
PRPF8-208ENST00000573716 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
PRPF8-208ENST00000573716 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
PRPF8-208ENST00000573716 FAM236DA0A1B0GTK5 79 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 K7EP34 96 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 IGKCP01834 107 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 C3orf79P0CE67 100 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 FAM236CP0DP71 79 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 HSD52Q0P140 79 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 Q96NJ1 140 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
PRPF8-208ENST00000573716 IGLV5-48A0A075B6I7 105 aa6.16□□□□□ -1.42
PRPF8-208ENST00000573716 F8W1H4 67 aa6.16□□□□□ -1.42
PRPF8-208ENST00000573716 F8WEM9 126 aa6.16□□□□□ -1.42
PRPF8-208ENST00000573716 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
PRPF8-208ENST00000573716 A0A1B0GWB2 263 aa6.14□□□□□ -1.43
PRPF8-208ENST00000573716 LITAFQ99732 161 aa6.14□□□□□ -1.43
PRPF8-208ENST00000573716 TRBV7-6A0A0J9YX20 115 aa6.13□□□□□ -1.43
PRPF8-208ENST00000573716 FABP2P12104 132 aa6.13□□□□□ -1.43
PRPF8-208ENST00000573716 E9PLD3 99 aa6.12□□□□□ -1.43
PRPF8-208ENST00000573716 HSPB8Q9UJY1 196 aa6.12□□□□□ -1.43
PRPF8-208ENST00000573716 TRBV7-7A0A0K0K1E9 115 aa6.1□□□□□ -1.43
PRPF8-208ENST00000573716 TIMM17BO60830 172 aa6.1□□□□□ -1.43
PRPF8-208ENST00000573716 COX8AP10176 69 aa6.1□□□□□ -1.43
PRPF8-208ENST00000573716 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
PRPF8-208ENST00000573716 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
PRPF8-208ENST00000573716 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
PRPF8-208ENST00000573716 NHP2Q9NX24 153 aaKnown RBP6.09□□□□□ -1.43
PRPF8-208ENST00000573716 ZNF815PA8K554 130 aa6.08□□□□□ -1.44
PRPF8-208ENST00000573716 SYS1-DBNDD2H3BUS1 97 aa6.08□□□□□ -1.44
PRPF8-208ENST00000573716 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
PRPF8-208ENST00000573716 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
PRPF8-208ENST00000573716 SPCS1Q9Y6A9 102 aa6.08□□□□□ -1.44
PRPF8-208ENST00000573716 LST1O00453 97 aa6.07□□□□□ -1.44
PRPF8-208ENST00000573716 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
PRPF8-208ENST00000573716 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
PRPF8-208ENST00000573716 Q6JHZ5 121 aa6.07□□□□□ -1.44
PRPF8-208ENST00000573716 CLEC2BQ92478 149 aa6.07□□□□□ -1.44
PRPF8-208ENST00000573716 A4D1N5 150 aa6.06□□□□□ -1.44
PRPF8-208ENST00000573716 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
PRPF8-208ENST00000573716 A8MUU9 505 aa6.05□□□□□ -1.44
PRPF8-208ENST00000573716 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
PRPF8-208ENST00000573716 LINC01545Q5VT33 79 aa6.04□□□□□ -1.44
PRPF8-208ENST00000573716 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
PRPF8-208ENST00000573716 TRAV13-2A0A0B4J235 113 aa6.03□□□□□ -1.44
PRPF8-208ENST00000573716 H3BUT2 72 aa6.03□□□□□ -1.44
PRPF8-208ENST00000573716 Q6ZVH6 145 aa6.03□□□□□ -1.44
PRPF8-208ENST00000573716 LYRM7Q5U5X0 104 aa6.02□□□□□ -1.45
PRPF8-208ENST00000573716 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
PRPF8-208ENST00000573716 H3BMG7 143 aa6.01□□□□□ -1.45
PRPF8-208ENST00000573716 SCGB1D4Q6XE38 83 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms