RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 UQCR10Q9UDW1 63 aa4.46□□□□□ -1.7
SMG6-211ENST00000572369 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 HSD52Q0P140 79 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 Q6ZQY7 126 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 PRO1933Q9H354 126 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 PRO1854Q9UHT4 67 aa4.45□□□□□ -1.7
SMG6-211ENST00000572369 FXYD2P54710 66 aa4.44□□□□□ -1.7
SMG6-211ENST00000572369 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
SMG6-211ENST00000572369 H0YGX0 51 aa4.43□□□□□ -1.7
SMG6-211ENST00000572369 PSMB2P49721 201 aa4.43□□□□□ -1.7
SMG6-211ENST00000572369 LINC01547P58512 204 aaPredicted RBP4.43□□□□□ -1.7
SMG6-211ENST00000572369 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
SMG6-211ENST00000572369 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
SMG6-211ENST00000572369 Q8N377 158 aa4.43□□□□□ -1.7
SMG6-211ENST00000572369 CDIP1Q9H305 208 aa4.43□□□□□ -1.7
SMG6-211ENST00000572369 FP248Q71RG6 208 aaPredicted RBP4.42□□□□□ -1.7
SMG6-211ENST00000572369 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
SMG6-211ENST00000572369 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
SMG6-211ENST00000572369 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
SMG6-211ENST00000572369 K7ERJ3 54 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 GHRHP01286 108 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 COX6CP09669 75 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 SMIM6P0DI80 62 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 CD164Q04900 197 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 PPDPFLQ8WWR9 84 aa4.4□□□□□ -1.71
SMG6-211ENST00000572369 A0A0G2JQZ4 141 aa4.39□□□□□ -1.71
SMG6-211ENST00000572369 TRIAP1O43715 76 aa4.39□□□□□ -1.71
SMG6-211ENST00000572369 DNAL4O96015 105 aa4.39□□□□□ -1.71
SMG6-211ENST00000572369 A0A1B0GX51 115 aa4.38□□□□□ -1.71
SMG6-211ENST00000572369 FABP2P12104 132 aa4.38□□□□□ -1.71
SMG6-211ENST00000572369 Q6JHZ5 121 aa4.38□□□□□ -1.71
SMG6-211ENST00000572369 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
SMG6-211ENST00000572369 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
SMG6-211ENST00000572369 M0R143 59 aa4.37□□□□□ -1.71
SMG6-211ENST00000572369 TCL1BO95988 128 aa4.37□□□□□ -1.71
SMG6-211ENST00000572369 SCGB1C2P0DMR2 95 aa4.37□□□□□ -1.71
SMG6-211ENST00000572369 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
SMG6-211ENST00000572369 H3BUT2 72 aa4.36□□□□□ -1.71
SMG6-211ENST00000572369 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
SMG6-211ENST00000572369 IGFL1Q6UW32 110 aa4.36□□□□□ -1.71
SMG6-211ENST00000572369 IGLV8-61A0A075B6I0 122 aa4.35□□□□□ -1.71
SMG6-211ENST00000572369 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
SMG6-211ENST00000572369 ORMDL1Q9P0S3 153 aa4.35□□□□□ -1.71
SMG6-211ENST00000572369 H3BMG7 143 aa4.34□□□□□ -1.71
SMG6-211ENST00000572369 H3BQ85 93 aa4.34□□□□□ -1.71
SMG6-211ENST00000572369 TRBV7-7A0A0K0K1E9 115 aa4.33□□□□□ -1.72
SMG6-211ENST00000572369 LOC105371267A0A1B0GV96 52 aa4.33□□□□□ -1.72
SMG6-211ENST00000572369 BATFQ16520 125 aa4.33□□□□□ -1.72
SMG6-211ENST00000572369 Q5XG85 94 aa4.33□□□□□ -1.72
SMG6-211ENST00000572369 A0A1B0GV72 72 aa4.32□□□□□ -1.72
SMG6-211ENST00000572369 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
SMG6-211ENST00000572369 TMEM256-PLSCR3K7ERE1 68 aa4.32□□□□□ -1.72
SMG6-211ENST00000572369 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
SMG6-211ENST00000572369 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
SMG6-211ENST00000572369 TRACP01848 142 aa4.3□□□□□ -1.72
SMG6-211ENST00000572369 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
SMG6-211ENST00000572369 TEN1Q86WV5 123 aa4.3□□□□□ -1.72
SMG6-211ENST00000572369 ANKRD29Q8N6D5 301 aa4.3□□□□□ -1.72
SMG6-211ENST00000572369 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
SMG6-211ENST00000572369 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
SMG6-211ENST00000572369 LST1O00453 97 aa4.29□□□□□ -1.72
SMG6-211ENST00000572369 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
SMG6-211ENST00000572369 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
SMG6-211ENST00000572369 XP32Q5T750 250 aa4.28□□□□□ -1.72
SMG6-211ENST00000572369 LYRM7Q5U5X0 104 aa4.28□□□□□ -1.72
SMG6-211ENST00000572369 Q6Q795 121 aa4.28□□□□□ -1.72
SMG6-211ENST00000572369 USH2AO75445 5202 aa4.27□□□□□ -1.73
SMG6-211ENST00000572369 A0A087WSZ3 146 aa4.27□□□□□ -1.73
SMG6-211ENST00000572369 BAALC-AS2P0C853 105 aa4.27□□□□□ -1.73
SMG6-211ENST00000572369 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
SMG6-211ENST00000572369 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
SMG6-211ENST00000572369 CCKP06307 115 aa4.25□□□□□ -1.73
SMG6-211ENST00000572369 RBM3P98179 157 aaKnown RBP4.25□□□□□ -1.73
SMG6-211ENST00000572369 DSCR8Q96T75 97 aa4.25□□□□□ -1.73
SMG6-211ENST00000572369 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
SMG6-211ENST00000572369 TRBV7-4A0A0J9YYF1 115 aa4.24□□□□□ -1.73
SMG6-211ENST00000572369 A0A1W2PNM2 257 aa4.24□□□□□ -1.73
SMG6-211ENST00000572369 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
SMG6-211ENST00000572369 TRBV20-1A0A075B6N2 111 aa4.23□□□□□ -1.73
SMG6-211ENST00000572369 C9JAW5 83 aa4.23□□□□□ -1.73
SMG6-211ENST00000572369 SIGMAR1Q99720 223 aa4.23□□□□□ -1.73
SMG6-211ENST00000572369 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
SMG6-211ENST00000572369 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
SMG6-211ENST00000572369 JMJD7-PLA2G4BH0Y9G9 81 aa4.22□□□□□ -1.73
SMG6-211ENST00000572369 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
SMG6-211ENST00000572369 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
SMG6-211ENST00000572369 Q96NJ1 140 aa4.21□□□□□ -1.74
SMG6-211ENST00000572369 A0A1W2PPM0 123 aa4.2□□□□□ -1.74
SMG6-211ENST00000572369 TAX1BP3O14907 124 aa4.2□□□□□ -1.74
SMG6-211ENST00000572369 IGKV4-1P06312 121 aa4.2□□□□□ -1.74
SMG6-211ENST00000572369 C21orf62-AS1Q17RA5 79 aa4.2□□□□□ -1.74
SMG6-211ENST00000572369 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
SMG6-211ENST00000572369 DEFB116Q30KQ4 102 aa4.19□□□□□ -1.74
SMG6-211ENST00000572369 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
SMG6-211ENST00000572369 C14orf132Q9NPU4 83 aa4.18□□□□□ -1.74
SMG6-211ENST00000572369 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 PDE6GP18545 87 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms