RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 SCXQ7RTU7 201 aa11.93□□□□□ -0.5
RPAIN-210ENST00000571613 C3orf22Q8N5N4 141 aa11.93□□□□□ -0.5
RPAIN-210ENST00000571613 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
RPAIN-210ENST00000571613 DNAH8Q96JB1 4490 aa11.91□□□□□ -0.5
RPAIN-210ENST00000571613 SCGB1A1P11684 91 aa11.91□□□□□ -0.5
RPAIN-210ENST00000571613 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.5
RPAIN-210ENST00000571613 Q6Q795 121 aa11.88□□□□□ -0.51
RPAIN-210ENST00000571613 IMUPQ9GZP8 106 aa11.88□□□□□ -0.51
RPAIN-210ENST00000571613 IGLV7-43P04211 117 aa11.87□□□□□ -0.51
RPAIN-210ENST00000571613 Q6JHZ5 121 aa11.87□□□□□ -0.51
RPAIN-210ENST00000571613 ATP5EP2Q5VTU8 51 aa11.86□□□□□ -0.51
RPAIN-210ENST00000571613 SPRR4Q96PI1 79 aa11.86□□□□□ -0.51
RPAIN-210ENST00000571613 TRBV7-7A0A0K0K1E9 115 aa11.85□□□□□ -0.51
RPAIN-210ENST00000571613 Q8NBF4 154 aa11.84□□□□□ -0.51
RPAIN-210ENST00000571613 PKD1P98161 4303 aa11.84□□□□□ -0.51
RPAIN-210ENST00000571613 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
RPAIN-210ENST00000571613 A0A1B0GVY2 172 aa11.83□□□□□ -0.52
RPAIN-210ENST00000571613 A0A1W2PNM2 257 aa11.8□□□□□ -0.52
RPAIN-210ENST00000571613 Q6ZVQ6 151 aa11.8□□□□□ -0.52
RPAIN-210ENST00000571613 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
RPAIN-210ENST00000571613 IGFL1Q6UW32 110 aa11.79□□□□□ -0.52
RPAIN-210ENST00000571613 CRYGAP11844 174 aa11.78□□□□□ -0.52
RPAIN-210ENST00000571613 NREPQ16612 68 aa11.76□□□□□ -0.53
RPAIN-210ENST00000571613 IGKV3D-7A0A0C4DH55 119 aa11.75□□□□□ -0.53
RPAIN-210ENST00000571613 CXCL6P80162 114 aa11.74□□□□□ -0.53
RPAIN-210ENST00000571613 HAMPP81172 84 aa11.73□□□□□ -0.53
RPAIN-210ENST00000571613 RYR2Q92736 4967 aa11.72□□□□□ -0.53
RPAIN-210ENST00000571613 C9orf153Q5TBE3 101 aa11.7□□□□□ -0.54
RPAIN-210ENST00000571613 PCP4P48539 62 aa11.69□□□□□ -0.54
RPAIN-210ENST00000571613 IGLV9-49A0A0B4J1Y8 123 aa11.68□□□□□ -0.54
RPAIN-210ENST00000571613 HIST1H4AP62805 103 aaKnown RBP11.65□□□□□ -0.55
RPAIN-210ENST00000571613 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
RPAIN-210ENST00000571613 BPY2O14599 106 aa11.64□□□□□ -0.55
RPAIN-210ENST00000571613 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
RPAIN-210ENST00000571613 A0A087WSZ3 146 aa11.62□□□□□ -0.55
RPAIN-210ENST00000571613 KMT2CQ8NEZ4 4911 aaKnown RBP11.62□□□□□ -0.55
RPAIN-210ENST00000571613 MOBPQ13875 183 aa11.62□□□□□ -0.55
RPAIN-210ENST00000571613 FAM229BQ4G0N7 80 aa11.62□□□□□ -0.55
RPAIN-210ENST00000571613 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
RPAIN-210ENST00000571613 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
RPAIN-210ENST00000571613 SSBP3-AS1Q7Z2R9 100 aa11.6□□□□□ -0.55
RPAIN-210ENST00000571613 ANAPC11Q9NYG5 84 aa11.59□□□□□ -0.55
RPAIN-210ENST00000571613 SRRM2Q9UQ35 2752 aaKnown RBP11.59□□□□□ -0.55
RPAIN-210ENST00000571613 DYNC1H1Q14204 4646 aaKnown RBP11.58□□□□□ -0.56
RPAIN-210ENST00000571613 SPINK6Q6UWN8 80 aa11.57□□□□□ -0.56
RPAIN-210ENST00000571613 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
RPAIN-210ENST00000571613 SS18L2Q9UHA2 77 aa11.55□□□□□ -0.56
RPAIN-210ENST00000571613 A0A087WVE0 104 aa11.54□□□□□ -0.56
RPAIN-210ENST00000571613 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
RPAIN-210ENST00000571613 CD164Q04900 197 aa11.53□□□□□ -0.56
RPAIN-210ENST00000571613 ATOX1O00244 68 aa11.52□□□□□ -0.57
RPAIN-210ENST00000571613 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-210ENST00000571613 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
RPAIN-210ENST00000571613 J3KT08 172 aa11.49□□□□□ -0.57
RPAIN-210ENST00000571613 IGKV4-1P06312 121 aa11.48□□□□□ -0.57
RPAIN-210ENST00000571613 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
RPAIN-210ENST00000571613 LINC00472Q9H8W2 130 aa11.47□□□□□ -0.57
RPAIN-210ENST00000571613 DSCR10P59022 87 aa11.46□□□□□ -0.57
RPAIN-210ENST00000571613 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.58
RPAIN-210ENST00000571613 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.58
RPAIN-210ENST00000571613 A0A087X002 238 aa11.45□□□□□ -0.58
RPAIN-210ENST00000571613 APOBP04114 4563 aaKnown RBP11.43□□□□□ -0.58
RPAIN-210ENST00000571613 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
RPAIN-210ENST00000571613 KRTAP13-2Q52LG2 175 aa11.43□□□□□ -0.58
RPAIN-210ENST00000571613 Q8N9L7 120 aa11.43□□□□□ -0.58
RPAIN-210ENST00000571613 FAM229AH3BQW9 127 aa11.4□□□□□ -0.58
RPAIN-210ENST00000571613 SMIM20Q8N5G0 67 aa11.4□□□□□ -0.58
RPAIN-210ENST00000571613 K7EQZ3 153 aa11.39□□□□□ -0.59
RPAIN-210ENST00000571613 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-210ENST00000571613 DEFB116Q30KQ4 102 aa11.39□□□□□ -0.59
RPAIN-210ENST00000571613 A8MWP4 228 aa11.38□□□□□ -0.59
RPAIN-210ENST00000571613 NDUFB1O75438 58 aa11.37□□□□□ -0.59
RPAIN-210ENST00000571613 TYMSOSQ8TAI1 123 aa11.37□□□□□ -0.59
RPAIN-210ENST00000571613 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
RPAIN-210ENST00000571613 Q5XG85 94 aa11.36□□□□□ -0.59
RPAIN-210ENST00000571613 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
RPAIN-210ENST00000571613 Q96NJ1 140 aa11.35□□□□□ -0.59
RPAIN-210ENST00000571613 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
RPAIN-210ENST00000571613 SERP2Q8N6R1 65 aa11.34□□□□□ -0.59
RPAIN-210ENST00000571613 RYR3Q15413 4870 aa11.34□□□□□ -0.59
RPAIN-210ENST00000571613 LIMD2Q9BT23 127 aa11.33□□□□□ -0.6
RPAIN-210ENST00000571613 COX7CP15954 63 aa11.32□□□□□ -0.6
RPAIN-210ENST00000571613 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
RPAIN-210ENST00000571613 UQCRQO14949 82 aa11.31□□□□□ -0.6
RPAIN-210ENST00000571613 TRAV7A0A075B6U4 112 aa11.3□□□□□ -0.6
RPAIN-210ENST00000571613 SPINK1P00995 79 aa11.3□□□□□ -0.6
RPAIN-210ENST00000571613 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
RPAIN-210ENST00000571613 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.61
RPAIN-210ENST00000571613 FAT1Q14517 4588 aa11.25□□□□□ -0.61
RPAIN-210ENST00000571613 RPS29P62273 56 aaKnown RBP11.25□□□□□ -0.61
RPAIN-210ENST00000571613 Q5VSD8 79 aa11.24□□□□□ -0.61
RPAIN-210ENST00000571613 LINC00304Q8N9R0 145 aa11.24□□□□□ -0.61
RPAIN-210ENST00000571613 A0A1B0GVX0 72 aa11.22□□□□□ -0.61
RPAIN-210ENST00000571613 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
RPAIN-210ENST00000571613 CASC2Q6XLA1 102 aa11.2□□□□□ -0.62
RPAIN-210ENST00000571613 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
RPAIN-210ENST00000571613 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-210ENST00000571613 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
RPAIN-210ENST00000571613 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
RPAIN-210ENST00000571613 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms