RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 LCE6AA0A183 80 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 OXTP01178 125 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 C1orf137Q5JT78 98 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 FRAS1Q86XX4 4008 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 TRBV7-4A0A0J9YYF1 115 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 PDE6GP18545 87 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 F8WEM9 126 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 CIRBP-AS1Q8TBR5 109 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
SMG1-215ENST00000568239 H0Y9J4 135 aa4.35□□□□□ -1.71
SMG1-215ENST00000568239 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
SMG1-215ENST00000568239 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
SMG1-215ENST00000568239 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
SMG1-215ENST00000568239 SCXQ7RTU7 201 aa4.35□□□□□ -1.71
SMG1-215ENST00000568239 A0A0A0MQY5 61 aa4.34□□□□□ -1.72
SMG1-215ENST00000568239 A0A0G2JQZ4 141 aa4.34□□□□□ -1.72
SMG1-215ENST00000568239 SMIM29Q86T20 159 aa4.34□□□□□ -1.72
SMG1-215ENST00000568239 KRTAP13-1Q8IUC0 172 aa4.33□□□□□ -1.72
SMG1-215ENST00000568239 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
SMG1-215ENST00000568239 PKD1P98161 4303 aa4.32□□□□□ -1.72
SMG1-215ENST00000568239 ZNF861PO60384 105 aa4.32□□□□□ -1.72
SMG1-215ENST00000568239 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
SMG1-215ENST00000568239 Q6ZVQ6 151 aa4.31□□□□□ -1.72
SMG1-215ENST00000568239 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
SMG1-215ENST00000568239 IGLV9-49A0A0B4J1Y8 123 aa4.31□□□□□ -1.72
SMG1-215ENST00000568239 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
SMG1-215ENST00000568239 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 Q6ZSA8 131 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 TRBV7-7A0A0K0K1E9 115 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 NREPQ16612 68 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 Q6JHZ5 121 aa4.3□□□□□ -1.72
SMG1-215ENST00000568239 Q8NBF4 154 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 SPRR4Q96PI1 79 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 SPRR1BP22528 89 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
SMG1-215ENST00000568239 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 A0A087WVE0 104 aa4.29□□□□□ -1.72
SMG1-215ENST00000568239 Q6Q795 121 aa4.28□□□□□ -1.72
SMG1-215ENST00000568239 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
SMG1-215ENST00000568239 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
SMG1-215ENST00000568239 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
SMG1-215ENST00000568239 RYR2Q92736 4967 aa4.27□□□□□ -1.73
SMG1-215ENST00000568239 A0A087WSZ3 146 aa4.27□□□□□ -1.73
SMG1-215ENST00000568239 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
SMG1-215ENST00000568239 IGLV8-61A0A075B6I0 122 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 CRYGAP11844 174 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 MOBPQ13875 183 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 HRCT1Q6UXD1 115 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 BPY2O14599 106 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
SMG1-215ENST00000568239 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
SMG1-215ENST00000568239 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
SMG1-215ENST00000568239 LINC00483Q53H64 154 aa4.25□□□□□ -1.73
SMG1-215ENST00000568239 Q8N9L7 120 aa4.25□□□□□ -1.73
SMG1-215ENST00000568239 A0A1B0GW54 56 aa4.24□□□□□ -1.73
SMG1-215ENST00000568239 CD164Q04900 197 aa4.24□□□□□ -1.73
SMG1-215ENST00000568239 DEFB116Q30KQ4 102 aa4.24□□□□□ -1.73
SMG1-215ENST00000568239 CXCL6P80162 114 aa4.24□□□□□ -1.73
SMG1-215ENST00000568239 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
SMG1-215ENST00000568239 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
SMG1-215ENST00000568239 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
SMG1-215ENST00000568239 RYR3Q15413 4870 aa4.21□□□□□ -1.74
SMG1-215ENST00000568239 FAT1Q14517 4588 aa4.2□□□□□ -1.74
SMG1-215ENST00000568239 A0A087X002 238 aa4.2□□□□□ -1.74
SMG1-215ENST00000568239 FAM236DA0A1B0GTK5 79 aa4.19□□□□□ -1.74
SMG1-215ENST00000568239 ATOX1O00244 68 aa4.19□□□□□ -1.74
SMG1-215ENST00000568239 FAM236CP0DP71 79 aa4.19□□□□□ -1.74
SMG1-215ENST00000568239 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
SMG1-215ENST00000568239 K7EQZ3 153 aa4.18□□□□□ -1.74
SMG1-215ENST00000568239 PLA2G1BP04054 148 aaKnown RBP4.18□□□□□ -1.74
SMG1-215ENST00000568239 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
SMG1-215ENST00000568239 DSCR10P59022 87 aa4.18□□□□□ -1.74
SMG1-215ENST00000568239 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
SMG1-215ENST00000568239 J3KT08 172 aa4.17□□□□□ -1.74
SMG1-215ENST00000568239 SSBP3-AS1Q7Z2R9 100 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 CCDC179H3BU77 68 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
SMG1-215ENST00000568239 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
SMG1-215ENST00000568239 FAM229BQ4G0N7 80 aa4.14□□□□□ -1.75
SMG1-215ENST00000568239 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
SMG1-215ENST00000568239 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
SMG1-215ENST00000568239 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
SMG1-215ENST00000568239 NDUFB1O75438 58 aa4.13□□□□□ -1.75
SMG1-215ENST00000568239 CDK2AP2O75956 126 aa4.13□□□□□ -1.75
SMG1-215ENST00000568239 COX7CP15954 63 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms