RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ORMDL1Q9P0S3 153 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 ERC2-IT1O76042 136 aa3.56□□□□□ -1.84
SF3B3-210ENST00000567654 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
SF3B3-210ENST00000567654 Q6ZQY7 126 aa3.56□□□□□ -1.84
SF3B3-210ENST00000567654 OBSCN-AS1Q96MR7 158 aa3.56□□□□□ -1.84
SF3B3-210ENST00000567654 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
SF3B3-210ENST00000567654 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
SF3B3-210ENST00000567654 EPM2AB3EWF7 344 aa3.55□□□□□ -1.84
SF3B3-210ENST00000567654 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
SF3B3-210ENST00000567654 Q6ZRX8 168 aa3.55□□□□□ -1.84
SF3B3-210ENST00000567654 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
SF3B3-210ENST00000567654 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
SF3B3-210ENST00000567654 PRLHP81277 87 aa3.54□□□□□ -1.84
SF3B3-210ENST00000567654 SMCR5Q8TEV8 140 aa3.54□□□□□ -1.84
SF3B3-210ENST00000567654 VPS25Q9BRG1 176 aa3.54□□□□□ -1.84
SF3B3-210ENST00000567654 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
SF3B3-210ENST00000567654 HAMPP81172 84 aa3.53□□□□□ -1.84
SF3B3-210ENST00000567654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.53□□□□□ -1.84
SF3B3-210ENST00000567654 FAM19A1Q7Z5A9 133 aa3.53□□□□□ -1.84
SF3B3-210ENST00000567654 Q8N377 158 aa3.53□□□□□ -1.84
SF3B3-210ENST00000567654 LCE6AA0A183 80 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 J3QR89 54 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 XGP55808 180 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 KRTAP10-1P60331 282 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 UBE2BP63146 152 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 DEFB105AQ8NG35 78 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 CBY1Q9Y3M2 126 aa3.52□□□□□ -1.85
SF3B3-210ENST00000567654 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
SF3B3-210ENST00000567654 FAT1Q14517 4588 aa3.51□□□□□ -1.85
SF3B3-210ENST00000567654 INAFM2P0DMQ5 153 aa3.51□□□□□ -1.85
SF3B3-210ENST00000567654 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
SF3B3-210ENST00000567654 PKIGQ9Y2B9 76 aa3.51□□□□□ -1.85
SF3B3-210ENST00000567654 IGLV5-48A0A075B6I7 105 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
SF3B3-210ENST00000567654 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 Q6ZQT0 140 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 DHRS4-AS1Q9P1J3 65 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 LAMTOR3Q9UHA4 124 aa3.5□□□□□ -1.85
SF3B3-210ENST00000567654 FAM240AA0A1B0GVK7 77 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 JMJD7-PLA2G4BH0Y9G9 81 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 BCE1O60756 84 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 Q6ZSA8 131 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 HIGD2AQ9BW72 106 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 PSORS1C2Q9UIG4 136 aa3.49□□□□□ -1.85
SF3B3-210ENST00000567654 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 A0A1B0GVY2 172 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 SNCGO76070 127 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 CCKP06307 115 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 RBM3P98179 157 aaKnown RBP3.48□□□□□ -1.85
SF3B3-210ENST00000567654 SCXQ7RTU7 201 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
SF3B3-210ENST00000567654 HSPG2P98160 4391 aa3.47□□□□□ -1.85
SF3B3-210ENST00000567654 H0Y9J4 135 aa3.47□□□□□ -1.85
SF3B3-210ENST00000567654 UBE2AP49459 152 aa3.47□□□□□ -1.85
SF3B3-210ENST00000567654 H3BQ85 93 aa3.46□□□□□ -1.86
SF3B3-210ENST00000567654 C1orf137Q5JT78 98 aa3.46□□□□□ -1.86
SF3B3-210ENST00000567654 SIGMAR1Q99720 223 aa3.46□□□□□ -1.86
SF3B3-210ENST00000567654 RYR1P21817 5038 aa3.45□□□□□ -1.86
SF3B3-210ENST00000567654 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
SF3B3-210ENST00000567654 ACYP1P07311 99 aa3.45□□□□□ -1.86
SF3B3-210ENST00000567654 SPRR1BP22528 89 aa3.45□□□□□ -1.86
SF3B3-210ENST00000567654 DSCR8Q96T75 97 aa3.45□□□□□ -1.86
SF3B3-210ENST00000567654 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
SF3B3-210ENST00000567654 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
SF3B3-210ENST00000567654 IGKV3D-7A0A0C4DH55 119 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 ZNF861PO60384 105 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 IGLV7-43P04211 117 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 LINC00336Q6ZUF6 198 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
SF3B3-210ENST00000567654 IGLV8-61A0A075B6I0 122 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 Q6JHZ5 121 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 Q6ZVQ6 151 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 Q8NBF4 154 aa3.42□□□□□ -1.86
SF3B3-210ENST00000567654 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
SF3B3-210ENST00000567654 BIRC6Q9NR09 4857 aa3.41□□□□□ -1.86
SF3B3-210ENST00000567654 PDE6GP18545 87 aa3.41□□□□□ -1.86
SF3B3-210ENST00000567654 MT3P25713 68 aa3.41□□□□□ -1.86
SF3B3-210ENST00000567654 LINC00483Q53H64 154 aa3.41□□□□□ -1.86
SF3B3-210ENST00000567654 IGLV9-49A0A0B4J1Y8 123 aa3.4□□□□□ -1.87
SF3B3-210ENST00000567654 TNXBP22105 4242 aa3.39□□□□□ -1.87
SF3B3-210ENST00000567654 A0A087WVE0 104 aa3.39□□□□□ -1.87
SF3B3-210ENST00000567654 F8WEM9 126 aa3.39□□□□□ -1.87
SF3B3-210ENST00000567654 Q6Q795 121 aa3.39□□□□□ -1.87
SF3B3-210ENST00000567654 SMR3BP02814 79 aaPredicted RBP3.38□□□□□ -1.87
SF3B3-210ENST00000567654 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
SF3B3-210ENST00000567654 CRYGAP11844 174 aa3.38□□□□□ -1.87
SF3B3-210ENST00000567654 KRTAP10-4P60372 401 aaPredicted RBP3.38□□□□□ -1.87
SF3B3-210ENST00000567654 MOBPQ13875 183 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms